pycom04g17450

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
19843361 .. 19843552
192 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 192 bp
ATGCCATACGAAACTGAAAAAACGAAGAGTTCAGCAGCGGCGGCGGCGGCAGGGCATGCTATGATCGAGATAGAAGCGGGAAAGCCGTCAGGAAACGGGGTTGTGGCCGGAGGGCTGAGCCCTCTGAGTGAGACTGTGTGGAGGGGGAGAAGACAAGTTTGGAGATTGTGGGAGATGTGTCTGCAAGGCTGA

Protein Analysis

64

Amino Acids

6.73

Weight (kDa)

7.94

Isoelectric Point (pI)

69.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 38, 41, 44, 47, 77
AcoI YGGCCR 1 cut(s) 105
AjuI GAANNNNNNNTTGG 2 cut(s) 142, 174
Alw26I GTCTC 1 cut(s) 125
AoxI GGCC 1 cut(s) 105
ApeKI GCWGC 1 cut(s) 35
BanII GRGCYC 1 cut(s) 122
BbsI GAAGAC 1 cut(s) 157
BbvI GCAGC 1 cut(s) 47
BceAI ACGGC 1 cut(s) 70
BcoDI GTCTC 1 cut(s) 125
BisI GCNGC 5 cut(s) 36, 39, 42, 45, 48
BlpI GCTNAGC 1 cut(s) 116
BlsI GCNGC 5 cut(s) 37, 40, 43, 46, 49
BpiI GAAGAC 1 cut(s) 157
Bpu1102I GCTNAGC 1 cut(s) 116
BseMII CTCAG 2 cut(s) 107, 116
BseXI GCAGC 1 cut(s) 47
BshFI GGCC 1 cut(s) 107
BsiSI CCGG 1 cut(s) 108
BsmAI GTCTC 1 cut(s) 125
BsnI GGCC 1 cut(s) 107
Bsp1286I GDGCHC 1 cut(s) 122
Bsp143I GATC 1 cut(s) 63
Bsp1720I GCTNAGC 1 cut(s) 116
BspACI CCGC 5 cut(s) 38, 41, 44, 47, 77
BspANI GGCC 1 cut(s) 107
BspCNI CTCAG 2 cut(s) 108, 117
BssMI GATC 1 cut(s) 63
Bst4CI ACNGT 1 cut(s) 136
Bst6I CTCTTC 1 cut(s) 20
BstAPI GCANNNNNTGC 1 cut(s) 56
BstC8I GCNNGC 1 cut(s) 57
BstDEI CTNAG 2 cut(s) 116, 125
BstKTI GATC 1 cut(s) 66
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 1 cut(s) 63
BstMWI GCNNNNNNNGC 4 cut(s) 41, 44, 47, 56
BstNSI RCATGY 1 cut(s) 59
BstV1I GCAGC 1 cut(s) 47
BstV2I GAAGAC 1 cut(s) 157
BsuRI GGCC 1 cut(s) 107
Cac8I GCNNGC 1 cut(s) 57
CviAII CATG 1 cut(s) 56
CviJI RGCY 5 cut(s) 85, 107, 115, 120, 189
CviKI_1 RGCY 5 cut(s) 85, 107, 115, 120, 189
DdeI CTNAG 2 cut(s) 116, 125
DpnI GATC 1 cut(s) 65
DpnII GATC 1 cut(s) 63
EaeI YGGCCR 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 20
EarI CTCTTC 1 cut(s) 20
Eco24I GRGCYC 1 cut(s) 122
EcoT38I GRGCYC 1 cut(s) 122
FaeI CATG 1 cut(s) 59
FaiI YATR 3 cut(s) 7, 57, 62
FatI CATG 1 cut(s) 55
FauI CCCGC 1 cut(s) 70
Fnu4HI GCNGC 5 cut(s) 36, 39, 42, 45, 48
FriOI GRGCYC 1 cut(s) 122
Fsp4HI GCNGC 5 cut(s) 36, 39, 42, 45, 48
GluI GCNGC 5 cut(s) 36, 39, 42, 45, 48
HaeIII GGCC 1 cut(s) 107
HapII CCGG 1 cut(s) 108
Hin1II CATG 1 cut(s) 59
HpaII CCGG 1 cut(s) 108
Hpy188I TCNGA 1 cut(s) 126
Hpy188III TCNNGA 2 cut(s) 67, 90
HpyCH4III ACNGT 1 cut(s) 136
HpyCH4V TGCA 1 cut(s) 184
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 44, 47, 56
HpyF3I CTNAG 2 cut(s) 116, 125
Hsp92II CATG 1 cut(s) 59
Kzo9I GATC 1 cut(s) 63
LpnPI CCDG 3 cut(s) 36, 75, 121
Lsp1109I GCAGC 1 cut(s) 47
MalI GATC 1 cut(s) 65
MboI GATC 1 cut(s) 63
MboII GAAGA 2 cut(s) 37, 162
MhlI GDGCHC 1 cut(s) 122
MnlI CCTC 3 cut(s) 104, 132, 135
MspA1I CMGCKG 1 cut(s) 38
MspI CCGG 1 cut(s) 108
MwoI GCNNNNNNNGC 4 cut(s) 41, 44, 47, 56
NdeII GATC 1 cut(s) 63
NlaIII CATG 1 cut(s) 59
NspI RCATGY 1 cut(s) 59
PaeI GCATGC 1 cut(s) 59
PkrI GCNGC 5 cut(s) 37, 40, 43, 46, 49
SatI GCNGC 5 cut(s) 36, 39, 42, 45, 48
Sau3AI GATC 1 cut(s) 63
SduI GDGCHC 1 cut(s) 122
SgeI CNNG 8 cut(s) 63, 68, 79, 90, 102, 109, 120, 167
SphI GCATGC 1 cut(s) 59
SsiI CCGC 5 cut(s) 38, 41, 44, 47, 77
TaaI ACNGT 1 cut(s) 136
TaqI TCGA 1 cut(s) 66
TauI GCSGC 4 cut(s) 41, 44, 47, 50
TseI GCWGC 1 cut(s) 35
XceI RCATGY 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.