pycom04g21890

Calcineurin-like phosphoesterase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
22852379 .. 22853408
1030 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 450 bp
ATGATATATTTTCACTATCAATATTCCACGACCTATATGGGGTGGATAGTTAAATCTTTCAATCAAAACGGAAAACACGAGTACGTTGGATCGCCAGATGTTATGGTGGTGGTTCTTCCACATCTCCTCTTTCTGGTTTTTCCTGCTCTTATGCAGACTGCGGCTTTGGCTACTGAAAACAAGTCTCCAGAGAACATTTTCTCTCGTTTACAGGGAAGAAAGAAGATGACTGCGGTCAAGAGGAAAGGAGATCTTTATGGTATGATTACTCAGGTAGCAGGAAATCAAATTTCCATGTTGGAAACCGGTGGATTCGGAATGTACTTTTATTCTAATTGCAGGACTCTCGTCAAAGCATATGAGATGAATACCGTTCTCCATTTTCCAGGATATAGCCTAACAATTCCACTACTGTTGGCTTATACTGCCTACAAAACCAGGAGTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

150

Amino Acids

16.96

Weight (kDa)

9.52

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMEM62_C PF24394 10 - 129 2.2e-26 TMEM62 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 161, 233
AclWI GGATC 1 cut(s) 97
AcsI RAATTY 1 cut(s) 288
AfaI GTAC 2 cut(s) 83, 323
AfiI CCNNNNNNNGG 2 cut(s) 39, 133
AgeI ACCGGT 1 cut(s) 305
AgsI TTSAA 1 cut(s) 61
AjnI CCWGG 2 cut(s) 385, 437
Alw26I GTCTC 1 cut(s) 189
AlwI GGATC 1 cut(s) 97
ApoI RAATTY 1 cut(s) 288
ArsI GACNNNNNNTTYG 2 cut(s) 148, 180
AsiGI ACCGGT 1 cut(s) 305
Asp700I GAANNNNTTC 1 cut(s) 197
BauI CACGAG 1 cut(s) 77
BcgI CGANNNNNNTGC 2 cut(s) 328, 362
BciT130I CCWGG 2 cut(s) 387, 439
BcoDI GTCTC 1 cut(s) 189
BglII AGATCT 1 cut(s) 250
BisI GCNGC 1 cut(s) 162
BlsI GCNGC 1 cut(s) 163
Bme1390I CCNGG 2 cut(s) 387, 439
BmrFI CCNGG 2 cut(s) 387, 439
BoxI GACNNNNGTC 2 cut(s) 233, 347
BpmI CTGGAG 1 cut(s) 171
BsaWI WCCGGW 1 cut(s) 305
Bsc4I CCNNNNNNNGG 2 cut(s) 39, 133
Bse118I RCCGGY 1 cut(s) 305
BseBI CCWGG 2 cut(s) 387, 439
BseLI CCNNNNNNNGG 2 cut(s) 39, 133
BseMII CTCAG 1 cut(s) 284
BseRI GAGGAG 1 cut(s) 116
BshTI ACCGGT 1 cut(s) 305
BsiSI CCGG 1 cut(s) 306
BslI CCNNNNNNNGG 2 cut(s) 39, 133
BsmAI GTCTC 1 cut(s) 189
Bsp143I GATC 2 cut(s) 89, 250
BspACI CCGC 2 cut(s) 161, 233
BspCNI CTCAG 1 cut(s) 283
BspPI GGATC 1 cut(s) 97
BsrFI RCCGGY 1 cut(s) 305
BssAI RCCGGY 1 cut(s) 305
BssMI GATC 2 cut(s) 89, 250
BssSI CACGAG 1 cut(s) 77
Bst2BI CACGAG 1 cut(s) 77
Bst2UI CCWGG 2 cut(s) 387, 439
Bst4CI ACNGT 2 cut(s) 373, 414
BstDEI CTNAG 1 cut(s) 270
BstKTI GATC 2 cut(s) 92, 253
BstMAI GTCTC 1 cut(s) 189
BstMBI GATC 2 cut(s) 89, 250
BstMWI GCNNNNNNNGC 2 cut(s) 167, 425
BstNI CCWGG 2 cut(s) 387, 439
BstPAI GACNNNNGTC 2 cut(s) 233, 347
BstSCI CCNGG 2 cut(s) 385, 437
BstX2I RGATCY 1 cut(s) 250
BstYI RGATCY 1 cut(s) 250
Cfr10I RCCGGY 1 cut(s) 305
Csp6I GTAC 2 cut(s) 82, 322
CspAI ACCGGT 1 cut(s) 305
CspCI CAANNNNNGTGG 2 cut(s) 396, 431
CviAII CATG 1 cut(s) 295
CviJI RGCY 4 cut(s) 164, 170, 396, 419
CviKI_1 RGCY 4 cut(s) 164, 170, 396, 419
CviQI GTAC 2 cut(s) 82, 322
DdeI CTNAG 1 cut(s) 270
DpnI GATC 2 cut(s) 91, 252
DpnII GATC 2 cut(s) 89, 250
EcoRII CCWGG 2 cut(s) 385, 437
FaeI CATG 1 cut(s) 298
FalI AAGNNNNNCTT 2 cut(s) 237, 269
FatI CATG 1 cut(s) 294
FauNDI CATATG 1 cut(s) 358
Fnu4HI GCNGC 1 cut(s) 162
Fsp4HI GCNGC 1 cut(s) 162
GluI GCNGC 1 cut(s) 162
GsuI CTGGAG 1 cut(s) 171
HapII CCGG 1 cut(s) 306
Hin1II CATG 1 cut(s) 298
HinfI GANTC 2 cut(s) 312, 343
HpaII CCGG 1 cut(s) 306
Hpy166II GTNNAC 1 cut(s) 209
Hpy188I TCNGA 1 cut(s) 317
Hpy188III TCNNGA 2 cut(s) 188, 238
Hpy8I GTNNAC 1 cut(s) 209
HpyCH4III ACNGT 2 cut(s) 373, 414
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 2 cut(s) 154, 339
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 425
HpyF3I CTNAG 1 cut(s) 270
HpySE526I ACGT 1 cut(s) 84
Hsp92II CATG 1 cut(s) 298
Kzo9I GATC 2 cut(s) 89, 250
MaeII ACGT 1 cut(s) 84
MalI GATC 2 cut(s) 91, 252
MboI GATC 2 cut(s) 89, 250
MboII GAAGA 3 cut(s) 107, 228, 235
MflI RGATCY 1 cut(s) 250
MluCI AATT 3 cut(s) 288, 334, 402
MlyI GAGTC 1 cut(s) 337
MmeI TCCRAC 2 cut(s) 67, 279
MnlI CCTC 2 cut(s) 137, 234
MroXI GAANNNNTTC 1 cut(s) 197
MseI TTAA 1 cut(s) 51
MspI CCGG 1 cut(s) 306
MspR9I CCNGG 2 cut(s) 387, 439
MvaI CCWGG 2 cut(s) 387, 439
MwoI GCNNNNNNNGC 2 cut(s) 167, 425
NdeI CATATG 1 cut(s) 358
NdeII GATC 2 cut(s) 89, 250
NlaIII CATG 1 cut(s) 298
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 1 cut(s) 312
PfoI TCCNGGA 1 cut(s) 385
PinAI ACCGGT 1 cut(s) 305
PkrI GCNGC 1 cut(s) 163
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
PshAI GACNNNNGTC 2 cut(s) 233, 347
Psp6I CCWGG 2 cut(s) 385, 437
PspGI CCWGG 2 cut(s) 385, 437
PsuI RGATCY 1 cut(s) 250
RsaI GTAC 2 cut(s) 83, 323
RsaNI GTAC 2 cut(s) 82, 322
SaqAI TTAA 1 cut(s) 51
SatI GCNGC 1 cut(s) 162
Sau3AI GATC 2 cut(s) 89, 250
SchI GAGTC 1 cut(s) 337
ScrFI CCNGG 2 cut(s) 387, 439
SetI ASST 3 cut(s) 35, 87, 276
Sse9I AATT 3 cut(s) 288, 334, 402
SsiI CCGC 2 cut(s) 161, 233
SspI AATATT 1 cut(s) 23
StyD4I CCNGG 2 cut(s) 385, 437
TaaI ACNGT 2 cut(s) 373, 414
TaiI ACGT 1 cut(s) 87
TasI AATT 3 cut(s) 288, 334, 402
TatI WGTACW 1 cut(s) 321
TauI GCSGC 1 cut(s) 164
TfiI GAWTC 1 cut(s) 312
Tru1I TTAA 1 cut(s) 51
Tru9I TTAA 1 cut(s) 51
TspDTI ATGAA 1 cut(s) 380
TspGWI ACGGA 1 cut(s) 84
XapI RAATTY 1 cut(s) 288
XcmI CCANNNNNNNNNTGG 1 cut(s) 34
XmnI GAANNNNTTC 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.