pycom05g00100
NAC Family

inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
150197 .. 150491
295 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 189 bp
ATGTACCTAGTTTGGGAGCCATGCATATTGTGTGAAATGGCACTTGTACACCAGAGGATCATGTGGATATTCTTCGCATGCCGAAATGCAAAAGCAGGAGCAATGGGGAGTGTCCACAGACTACAAGGCCGAAGAAGCTTGAATCATCACTATGCTGTTTTCAGGGTCTCATTAGGGACGGACGGTTGA
Functional Annotation

Protein Analysis

63

Amino Acids

7.15

Weight (kDa)

9.49

Isoelectric Point (pI)

59.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 65
AfaI GTAC 2 cut(s) 5, 48
AfiI CCNNNNNNNGG 1 cut(s) 13
AgsI TTSAA 1 cut(s) 142
AluBI AGCT 1 cut(s) 138
AluI AGCT 1 cut(s) 138
Alw26I GTCTC 1 cut(s) 172
AlwI GGATC 1 cut(s) 65
AoxI GGCC 1 cut(s) 127
BcoDI GTCTC 1 cut(s) 172
BfaI CTAG 1 cut(s) 8
BmiI GGNNCC 1 cut(s) 18
BsaI GGTCTC 1 cut(s) 172
Bsc4I CCNNNNNNNGG 1 cut(s) 13
Bse3DI GCAATG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 13
BseMI GCAATG 1 cut(s) 108
BshFI GGCC 1 cut(s) 129
BslI CCNNNNNNNGG 1 cut(s) 13
BsmAI GTCTC 1 cut(s) 172
BsnI GGCC 1 cut(s) 129
Bso31I GGTCTC 1 cut(s) 172
Bsp1407I TGTACA 1 cut(s) 46
Bsp143I GATC 1 cut(s) 57
BspANI GGCC 1 cut(s) 129
BspLI GGNNCC 1 cut(s) 18
BspPI GGATC 1 cut(s) 65
BspTNI GGTCTC 1 cut(s) 172
BsrDI GCAATG 1 cut(s) 108
BsrGI TGTACA 1 cut(s) 46
BssMI GATC 1 cut(s) 57
Bst4CI ACNGT 1 cut(s) 185
BstAUI TGTACA 1 cut(s) 46
BstC8I GCNNGC 1 cut(s) 79
BstKTI GATC 1 cut(s) 60
BstMAI GTCTC 1 cut(s) 172
BstMBI GATC 1 cut(s) 57
BstMWI GCNNNNNNNGC 1 cut(s) 135
BstNSI RCATGY 1 cut(s) 81
BsuRI GGCC 1 cut(s) 129
Cac8I GCNNGC 1 cut(s) 79
Csp6I GTAC 2 cut(s) 4, 47
CviAII CATG 3 cut(s) 21, 61, 78
CviJI RGCY 3 cut(s) 19, 129, 138
CviKI_1 RGCY 3 cut(s) 19, 129, 138
CviQI GTAC 2 cut(s) 4, 47
DpnI GATC 1 cut(s) 59
DpnII GATC 1 cut(s) 57
Eco31I GGTCTC 1 cut(s) 172
EcoT22I ATGCAT 1 cut(s) 26
FaeI CATG 3 cut(s) 24, 64, 81
FaiI YATR 5 cut(s) 22, 26, 62, 79, 153
FatI CATG 3 cut(s) 20, 60, 77
FspBI CTAG 1 cut(s) 8
HaeIII GGCC 1 cut(s) 129
Hin1II CATG 3 cut(s) 24, 64, 81
HindIII AAGCTT 1 cut(s) 136
HinfI GANTC 1 cut(s) 142
Hpy166II GTNNAC 2 cut(s) 49, 115
Hpy8I GTNNAC 2 cut(s) 49, 115
HpyCH4III ACNGT 1 cut(s) 185
HpyCH4V TGCA 2 cut(s) 24, 89
HpyF10VI GCNNNNNNNGC 1 cut(s) 135
Hsp92II CATG 3 cut(s) 24, 64, 81
Kzo9I GATC 1 cut(s) 57
LmnI GCTCC 2 cut(s) 16, 98
LpnPI CCDG 3 cut(s) 65, 81, 148
MaeI CTAG 1 cut(s) 8
MalI GATC 1 cut(s) 59
MboI GATC 1 cut(s) 57
MboII GAAGA 2 cut(s) 64, 144
MnlI CCTC 1 cut(s) 48
Mph1103I ATGCAT 1 cut(s) 26
MslI CAYNNNNRTG 1 cut(s) 150
MwoI GCNNNNNNNGC 1 cut(s) 135
NdeII GATC 1 cut(s) 57
NlaIII CATG 3 cut(s) 24, 64, 81
NlaIV GGNNCC 1 cut(s) 18
NsiI ATGCAT 1 cut(s) 26
NspI RCATGY 1 cut(s) 81
PaeI GCATGC 1 cut(s) 81
PfeI GAWTC 1 cut(s) 142
PspN4I GGNNCC 1 cut(s) 18
RsaI GTAC 2 cut(s) 5, 48
RsaNI GTAC 2 cut(s) 4, 47
RseI CAYNNNNRTG 1 cut(s) 150
Sau3AI GATC 1 cut(s) 57
SetI ASST 2 cut(s) 9, 140
SmiMI CAYNNNNRTG 1 cut(s) 150
SphI GCATGC 1 cut(s) 81
SspMI CTAG 1 cut(s) 8
TaaI ACNGT 1 cut(s) 185
TatI WGTACW 1 cut(s) 46
TfiI GAWTC 1 cut(s) 142
XceI RCATGY 1 cut(s) 81
XspI CTAG 1 cut(s) 8
Zsp2I ATGCAT 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.