pycom05g02140

Protein of unknown function (DUF502)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Reverse (-)
2459204 .. 2460548
1345 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 327 bp
ATGGCGGAAGCTAAAGAGCCTACGTCGTCGAGTCCGCTGACCCAAGCCGACCCTGAAGATGTTTCCAGGTCTCCGCCAAGCTCCCCCAACTCCTCAACTCGCAAGGCATGCTATGCAGTGCTTCAGAGTTGGGTCTCAAAGAAATTCATGACCGGATGTATGGTTCTCTTTCCTGTCGCAGTTACATTCTTCATCACTTGGTGGTTTGTTCAGTTCGTAGATGGTTTCTTCAGTCCAATATATGCCAGGCTCGGGGTTAACATATTTGGTATGACTCCAGATCACAAAATTGATGTTTACTTTGGGACAACGATGACTAATTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

12.03

Weight (kDa)

6.53

Isoelectric Point (pI)

66.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 5, 35, 74
AcsI RAATTY 1 cut(s) 143
AcuI CTGAAG 3 cut(s) 75, 107, 214
AdeI CACNNNGTG 1 cut(s) 201
AfiI CCNNNNNNNGG 1 cut(s) 252
AjnI CCWGG 2 cut(s) 65, 245
AloI GAACNNNNNNTCC 2 cut(s) 147, 179
AluBI AGCT 2 cut(s) 11, 81
AluI AGCT 2 cut(s) 11, 81
Alw26I GTCTC 2 cut(s) 75, 139
Ama87I CYCGRG 1 cut(s) 251
ApoI RAATTY 1 cut(s) 143
AvaI CYCGRG 1 cut(s) 251
BccI CCATC 1 cut(s) 215
BciT130I CCWGG 2 cut(s) 67, 247
BcoDI GTCTC 2 cut(s) 75, 139
Bme1390I CCNGG 2 cut(s) 67, 247
BmeT110I CYCGRG 1 cut(s) 251
BmrFI CCNGG 2 cut(s) 67, 247
BpmI CTGGAG 1 cut(s) 261
BsaI GGTCTC 2 cut(s) 75, 139
BsaWI WCCGGW 1 cut(s) 152
Bsc4I CCNNNNNNNGG 1 cut(s) 252
BseBI CCWGG 2 cut(s) 67, 247
BseGI GGATG 1 cut(s) 161
BseLI CCNNNNNNNGG 1 cut(s) 252
BseRI GAGGAG 1 cut(s) 82
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 1 cut(s) 153
BslFI GGGAC 1 cut(s) 319
BslI CCNNNNNNNGG 1 cut(s) 252
BsmAI GTCTC 2 cut(s) 75, 139
BsmFI GGGAC 1 cut(s) 319
Bso31I GGTCTC 2 cut(s) 75, 139
BsoBI CYCGRG 1 cut(s) 251
Bsp143I GATC 1 cut(s) 280
BspACI CCGC 3 cut(s) 5, 35, 74
BspHI TCATGA 1 cut(s) 147
BspTNI GGTCTC 2 cut(s) 75, 139
BssMI GATC 1 cut(s) 280
Bst2UI CCWGG 2 cut(s) 67, 247
BstAPI GCANNNNNTGC 2 cut(s) 108, 113
BstC8I GCNNGC 1 cut(s) 109
BstF5I GGATG 1 cut(s) 161
BstKTI GATC 1 cut(s) 283
BstMAI GTCTC 2 cut(s) 75, 139
BstMBI GATC 1 cut(s) 280
BstMWI GCNNNNNNNGC 2 cut(s) 108, 113
BstNI CCWGG 2 cut(s) 67, 247
BstNSI RCATGY 1 cut(s) 111
BstSCI CCNGG 2 cut(s) 65, 245
BtsCI GGATG 1 cut(s) 161
BtsI GCAGTG 1 cut(s) 123
BtsIMutI CAGTG 1 cut(s) 123
Cac8I GCNNGC 1 cut(s) 109
CciI TCATGA 1 cut(s) 147
CviAII CATG 2 cut(s) 108, 148
CviJI RGCY 5 cut(s) 11, 19, 47, 81, 250
CviKI_1 RGCY 5 cut(s) 11, 19, 47, 81, 250
DpnI GATC 1 cut(s) 282
DpnII GATC 1 cut(s) 280
DraIII CACNNNGTG 1 cut(s) 201
EciI GGCGGA 2 cut(s) 20, 63
Eco31I GGTCTC 2 cut(s) 75, 139
Eco57I CTGAAG 3 cut(s) 75, 107, 214
Eco88I CYCGRG 1 cut(s) 251
EcoRII CCWGG 2 cut(s) 65, 245
FaeI CATG 2 cut(s) 111, 151
FaiI YATR 8 cut(s) 109, 114, 149, 161, 241, 243, 263, 272
FaqI GGGAC 1 cut(s) 319
FatI CATG 2 cut(s) 107, 147
FokI GGATG 1 cut(s) 168
GsuI CTGGAG 1 cut(s) 261
HapII CCGG 1 cut(s) 153
Hin1II CATG 2 cut(s) 111, 151
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 2 cut(s) 31, 274
HpaI GTTAAC 1 cut(s) 259
HpaII CCGG 1 cut(s) 153
Hpy166II GTNNAC 2 cut(s) 259, 298
Hpy188I TCNGA 1 cut(s) 126
Hpy188III TCNNGA 2 cut(s) 148, 278
Hpy8I GTNNAC 2 cut(s) 259, 298
Hpy99I CGWCG 2 cut(s) 28, 31
HpyCH4IV ACGT 1 cut(s) 23
HpyCH4V TGCA 1 cut(s) 116
HpyF10VI GCNNNNNNNGC 2 cut(s) 108, 113
HpySE526I ACGT 1 cut(s) 23
Hsp92II CATG 2 cut(s) 111, 151
KspAI GTTAAC 1 cut(s) 259
Kzo9I GATC 1 cut(s) 280
LmnI GCTCC 1 cut(s) 86
LpnPI CCDG 8 cut(s) 52, 66, 79, 166, 186, 232, 259, 291
MaeII ACGT 1 cut(s) 23
MaeIII GTNAC 1 cut(s) 181
MalI GATC 1 cut(s) 282
MboI GATC 1 cut(s) 280
MboII GAAGA 3 cut(s) 68, 181, 220
MluCI AATT 3 cut(s) 143, 288, 319
MlyI GAGTC 2 cut(s) 40, 268
MnlI CCTC 1 cut(s) 103
MseI TTAA 2 cut(s) 258, 325
MspA1I CMGCKG 1 cut(s) 37
MspI CCGG 1 cut(s) 153
MspR9I CCNGG 2 cut(s) 67, 247
MvaI CCWGG 2 cut(s) 67, 247
MwoI GCNNNNNNNGC 2 cut(s) 108, 113
NdeII GATC 1 cut(s) 280
NlaIII CATG 2 cut(s) 111, 151
NspI RCATGY 1 cut(s) 111
PaeI GCATGC 1 cut(s) 111
PagI TCATGA 1 cut(s) 147
PleI GAGTC 2 cut(s) 39, 268
PpsI GAGTC 2 cut(s) 39, 268
Psp6I CCWGG 2 cut(s) 65, 245
PspGI CCWGG 2 cut(s) 65, 245
SaqAI TTAA 2 cut(s) 258, 325
Sau3AI GATC 1 cut(s) 280
SchI GAGTC 2 cut(s) 40, 268
ScrFI CCNGG 2 cut(s) 67, 247
SetI ASST 4 cut(s) 13, 26, 71, 83
SphI GCATGC 1 cut(s) 111
Sse9I AATT 3 cut(s) 143, 288, 319
SsiI CCGC 3 cut(s) 5, 35, 74
StyD4I CCNGG 2 cut(s) 65, 245
TaiI ACGT 1 cut(s) 26
TaqI TCGA 1 cut(s) 29
TasI AATT 3 cut(s) 143, 288, 319
Tru1I TTAA 2 cut(s) 258, 325
Tru9I TTAA 2 cut(s) 258, 325
TscAI CASTG 1 cut(s) 123
TspDTI ATGAA 2 cut(s) 136, 181
TspRI CASTG 1 cut(s) 123
XapI RAATTY 1 cut(s) 143
XceI RCATGY 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.