pycom05g02350

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Reverse (-)
2755744 .. 2755974
231 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 231 bp
ATGCCTATTTATAGACATCTTAGGAGGGCTCTAGAGCTTTTACATGGAGGAGATAGAGGCCATGTCTTCCGCCACTTTCTCTTAACCTCTCTTACTGACTTCATGTTCTTTTGTTGCAGAAAAAGGGGAGCCCCTATTTTGCACTTTACTTCCCCCTTTTGTAGGAAGGAATTCATATCTTATTTATTTATTTATTATTATTATTATTATTATTATTTTTTTTTTTTTTAA
Functional Annotation

Protein Analysis

77

Amino Acids

9.61

Weight (kDa)

9.47

Isoelectric Point (pI)

49.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 70
AcsI RAATTY 1 cut(s) 170
AfiI CCNNNNNNNGG 1 cut(s) 162
AluBI AGCT 1 cut(s) 37
AluI AGCT 1 cut(s) 37
AoxI GGCC 1 cut(s) 58
ApoI RAATTY 1 cut(s) 170
Asp700I GAANNNNTTC 1 cut(s) 170
BanII GRGCYC 2 cut(s) 31, 133
BbsI GAAGAC 1 cut(s) 58
BfaI CTAG 1 cut(s) 32
BmiI GGNNCC 1 cut(s) 130
BpiI GAAGAC 1 cut(s) 58
Bsc4I CCNNNNNNNGG 1 cut(s) 162
BseLI CCNNNNNNNGG 1 cut(s) 162
BseRI GAGGAG 1 cut(s) 63
BshFI GGCC 1 cut(s) 60
BslI CCNNNNNNNGG 1 cut(s) 162
BsnI GGCC 1 cut(s) 60
Bsp1286I GDGCHC 2 cut(s) 31, 133
BspACI CCGC 1 cut(s) 70
BspANI GGCC 1 cut(s) 60
BspLI GGNNCC 1 cut(s) 130
BstDEI CTNAG 1 cut(s) 20
BstENI CCTNNNNNAGG 1 cut(s) 160
BstV2I GAAGAC 1 cut(s) 58
BsuRI GGCC 1 cut(s) 60
CviAII CATG 3 cut(s) 44, 62, 103
CviJI RGCY 4 cut(s) 29, 37, 60, 131
CviKI_1 RGCY 4 cut(s) 29, 37, 60, 131
DdeI CTNAG 1 cut(s) 20
EciI GGCGGA 1 cut(s) 59
Eco24I GRGCYC 2 cut(s) 31, 133
EcoNI CCTNNNNNAGG 1 cut(s) 160
EcoRI GAATTC 1 cut(s) 170
EcoT38I GRGCYC 2 cut(s) 31, 133
FaeI CATG 3 cut(s) 47, 65, 106
FaiI YATR 5 cut(s) 12, 45, 63, 104, 176
FatI CATG 3 cut(s) 43, 61, 102
FriOI GRGCYC 2 cut(s) 31, 133
FspBI CTAG 1 cut(s) 32
HaeIII GGCC 1 cut(s) 60
Hin1II CATG 3 cut(s) 47, 65, 106
Hpy188III TCNNGA 1 cut(s) 32
HpyAV CCTTC 1 cut(s) 160
HpyCH4V TGCA 2 cut(s) 117, 142
HpyF3I CTNAG 1 cut(s) 20
Hsp92II CATG 3 cut(s) 47, 65, 106
LmnI GCTCC 1 cut(s) 128
MaeI CTAG 1 cut(s) 32
MboII GAAGA 1 cut(s) 58
MhlI GDGCHC 2 cut(s) 31, 133
MluCI AATT 1 cut(s) 170
MnlI CCTC 4 cut(s) 18, 41, 50, 97
MroXI GAANNNNTTC 1 cut(s) 170
MseI TTAA 2 cut(s) 83, 229
NlaIII CATG 3 cut(s) 47, 65, 106
NlaIV GGNNCC 1 cut(s) 130
PdmI GAANNNNTTC 1 cut(s) 170
PspN4I GGNNCC 1 cut(s) 130
SaqAI TTAA 2 cut(s) 83, 229
SduI GDGCHC 2 cut(s) 31, 133
SetI ASST 2 cut(s) 39, 89
SgeI CNNG 4 cut(s) 44, 56, 74, 115
Sse9I AATT 1 cut(s) 170
SsiI CCGC 1 cut(s) 70
SspMI CTAG 1 cut(s) 32
TasI AATT 1 cut(s) 170
Tru1I TTAA 2 cut(s) 83, 229
Tru9I TTAA 2 cut(s) 83, 229
TspDTI ATGAA 2 cut(s) 91, 163
XagI CCTNNNNNAGG 1 cut(s) 160
XapI RAATTY 1 cut(s) 170
XbaI TCTAGA 1 cut(s) 31
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.