pycom05g02940

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
3454537 .. 3454888
352 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 312 bp
ATGAATTATTATTGTAGGATAGTACTAGTAGTTAATTTGGTGTGGGCCACTCTTTTTCCCTTCGATCGGGTTGAAAGCCCCGACAAGGTTTTTATTGAGGCCCAATGTAAGCACGCTATCATCGATTTGTACGTATTTCAATTTTCAATGATATCCCTAGTCTGTTTCTCCCTCTTCCTCCCCCTCCTTCATCTGTCTTCCTACCCCAACCTTAATTCTCTCTTTCCCCTTCTTTCTCGTTCTCTCCCATTTATCTCTCCTCCGTCCCCCTCTGTCTCCCCCATACTCTCTCCATCCTTTTTCTCTTTCTAA

Protein Analysis

104

Amino Acids

11.78

Weight (kDa)

6.69

Isoelectric Point (pI)

62.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 24, 131
AfiI CCNNNNNNNGG 2 cut(s) 66, 85
AgsI TTSAA 3 cut(s) 74, 140, 147
AhlI ACTAGT 1 cut(s) 25
Alw26I GTCTC 1 cut(s) 280
AoxI GGCC 2 cut(s) 45, 99
AspS9I GGNCC 2 cut(s) 45, 100
BbsI GAAGAC 1 cut(s) 189
BccI CCATC 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 280
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 2 cut(s) 26, 158
BmcAI AGTACT 1 cut(s) 24
BmgT120I GGNCC 2 cut(s) 45, 100
BpiI GAAGAC 1 cut(s) 189
Bsa29I ATCGAT 1 cut(s) 123
BsaAI YACGTR 1 cut(s) 133
Bsc4I CCNNNNNNNGG 2 cut(s) 66, 85
BseCI ATCGAT 1 cut(s) 123
BseGI GGATG 1 cut(s) 293
BseLI CCNNNNNNNGG 2 cut(s) 66, 85
BseRI GAGGAG 1 cut(s) 249
Bsh1285I CGRYCG 1 cut(s) 67
BshFI GGCC 2 cut(s) 47, 101
BshVI ATCGAT 1 cut(s) 123
BsiEI CGRYCG 1 cut(s) 67
BslFI GGGAC 1 cut(s) 250
BslI CCNNNNNNNGG 2 cut(s) 66, 85
BsmAI GTCTC 1 cut(s) 280
BsmFI GGGAC 1 cut(s) 250
BsnI GGCC 2 cut(s) 47, 101
Bsp143I GATC 1 cut(s) 64
BspANI GGCC 2 cut(s) 47, 101
BspDI ATCGAT 1 cut(s) 123
BssMI GATC 1 cut(s) 64
Bst6I CTCTTC 1 cut(s) 179
BstBAI YACGTR 1 cut(s) 133
BstC8I GCNNGC 1 cut(s) 114
BstF5I GGATG 1 cut(s) 293
BstKTI GATC 1 cut(s) 67
BstMAI GTCTC 1 cut(s) 280
BstMBI GATC 1 cut(s) 64
BstMCI CGRYCG 1 cut(s) 67
BstSNI TACGTA 1 cut(s) 133
BstV2I GAAGAC 1 cut(s) 189
Bsu15I ATCGAT 1 cut(s) 123
BsuRI GGCC 2 cut(s) 47, 101
BsuTUI ATCGAT 1 cut(s) 123
BtsCI GGATG 1 cut(s) 293
Cac8I GCNNGC 1 cut(s) 114
Cfr13I GGNCC 2 cut(s) 45, 100
ClaI ATCGAT 1 cut(s) 123
Csp6I GTAC 2 cut(s) 23, 130
CviJI RGCY 3 cut(s) 47, 78, 101
CviKI_1 RGCY 3 cut(s) 47, 78, 101
CviQI GTAC 2 cut(s) 23, 130
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
Eam1104I CTCTTC 1 cut(s) 179
EarI CTCTTC 1 cut(s) 179
Eco105I TACGTA 1 cut(s) 133
Eco32I GATATC 1 cut(s) 153
EcoRV GATATC 1 cut(s) 153
FaiI YATR 1 cut(s) 284
FaqI GGGAC 1 cut(s) 250
FokI GGATG 1 cut(s) 280
FspBI CTAG 2 cut(s) 26, 158
HaeIII GGCC 2 cut(s) 47, 101
HpyAV CCTTC 3 cut(s) 70, 197, 239
HpyCH4IV ACGT 1 cut(s) 132
HpySE526I ACGT 1 cut(s) 132
Kzo9I GATC 1 cut(s) 64
MaeI CTAG 2 cut(s) 26, 158
MaeII ACGT 1 cut(s) 132
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MboII GAAGA 2 cut(s) 166, 189
MluCI AATT 4 cut(s) 4, 34, 140, 214
MnlI CCTC 6 cut(s) 91, 182, 188, 194, 270, 280
MseI TTAA 2 cut(s) 33, 213
NdeII GATC 1 cut(s) 64
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 129
Ple19I CGATCG 1 cut(s) 67
Ppu21I YACGTR 1 cut(s) 133
PspPI GGNCC 2 cut(s) 45, 100
PvuI CGATCG 1 cut(s) 67
RsaI GTAC 2 cut(s) 24, 131
RsaNI GTAC 2 cut(s) 23, 130
SaqAI TTAA 2 cut(s) 33, 213
Sau3AI GATC 1 cut(s) 64
Sau96I GGNCC 2 cut(s) 45, 100
ScaI AGTACT 1 cut(s) 24
SetI ASST 3 cut(s) 90, 135, 213
SgeI CNNG 7 cut(s) 38, 80, 92, 97, 125, 170, 249
SnaBI TACGTA 1 cut(s) 133
SpeI ACTAGT 1 cut(s) 25
Sse9I AATT 4 cut(s) 4, 34, 140, 214
SspMI CTAG 2 cut(s) 26, 158
TaiI ACGT 1 cut(s) 135
TaqI TCGA 2 cut(s) 63, 123
TasI AATT 4 cut(s) 4, 34, 140, 214
TatI WGTACW 1 cut(s) 22
Tru1I TTAA 2 cut(s) 33, 213
Tru9I TTAA 2 cut(s) 33, 213
TspDTI ATGAA 2 cut(s) 17, 179
TspGWI ACGGA 1 cut(s) 252
XspI CTAG 2 cut(s) 26, 158
ZrmI AGTACT 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.