pycom05g02970

water channel activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
3471448 .. 3478042
6595 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4635 bp
ATGTGTAATCAAGATTTCAAGTATGGAGGTCCAACACATTTAAAAGTACCCAAATATAGGGACCTAGGAGGTCCTGGGACCCTCCGGAAGCCCGAAGAAACACTTGTAATCGACCTTCGGGACCCTCTAATAATTTGGGCACGTGCAGCGAAGAGGCTTGTTGCCTCCATGGATGTGCATGCAGCAGTGCTTACAAAGAAGAAGAAGAGGTTTCTAATTTTTGTTAGTCTCAACTCCCAATTCGGGACAACTAGTGGTAAGCCATGGTTATCCACCCCTTCTAAGGGCCTAGAAGACTCACATAGGCATTTTAGCTTTCTCATGGCCACATCGAAATCTGTGCCCTTACCACTTGGCCACTTGATGTGGTTGATTAATTTTAATTATTCAATGAACCAAATTCAATTAAAAATAGTGCTATGGAACCAAACTAGTCTAATTTTTTTTTTTTTTGAACTTTTATCTTGGAACCCCCCGATTTTGAAATCCTGGATCCGCCACTGCTTACAATTACAACCCAACACTAATCAAAACCATAGTAACTATCCGTCTACCATCTATAGTAGTACAGACCGAAGGATCTCAACTACAATTTTTGAGTTCAGGTACAAAATATTCATCTCGTCTGGAAAATTTACCCAGATGGTTCATTTGAATTCAAATGAAGCAAAGAACAAGCCAATACAAGACAAAAGAAAACAAGCCAAGCTGCCAAGAAAACAAACTAAGCTGCAAAGAAATCGAAACACAGACTCCGAAGGTTTTAAACTTTCAATTGATACTGATAGCAGGCAAAACAGAGAACAGGACAGCCAGCTGCCTCTCAAAAGCATCAGAAACAGGAAGATATTAAGTAACAGAGCTTCACAAGAGAGAGAGGTTGAAAAAGGTGAAGCAAAACAAGAGTGTGAGACGAAGAGTCAACGAGGTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAGTCTTCGTTGAAATTACGCAAGACACCCTCAATAATGGGTGCTGATATGTTTCGTGGTTTGATCCAAAGTGACTCGTTATTTAACGAGTTTACTAGTTTAACAGGTGAGTCAAGTCGGATTAACGGGTTAATTCTTGAATGCATACTCCCGCTAATCCAGCCAAAATCCAACGAAGCTCCAATGAAGACAACCCTATTCACTTCATCTCGCCCTCATATACAACATGACATTGAGTATATAATTAACCTTGAAAGGCCCGGTACAAGTTTTGCCTTTTTCGACCAACTTCAGACACCCTTAGATGGAAGCTTGGATATGAGTTTAATATATAGTTTTCAAAATGAAAGTGCTATAAGAGTTAAGAGAGGGAAGGTAGTAGTTTCCGGTGTAAAAAGATTGGTTCAATTGCCAATATGGGGAGTAACTCAACTTACTTATAAGCTCATTCACAATTTTTCTTTCCATCAATATGAGATATCAAGGAAAGTTTTAAGAGATTTGGCTTTGGTGGTAAAGGCTTATTTTTGGCAACTTGAGAATGGCACGCTCGCTGGTTCCAGAATAGTCATGCTAGAGCTATGGATTCAAGGTGCCATTACGCCTATATTGGTGATAGGTGCTAATAAAAAAATAGCACTCTGCCCTAAAATTTCATGCAACTGGCTTTTGGAGGGGCTTATATTTTTGGCAATGTTCATCCTTTCTTTCTCCCATTTTTCTCCTTATGAGCATAGCTTTCTTTCAAATTTAAGTTTGCATGTTGAATACTTAAATACACAACAGAAAATAATAAATAACATACAATATGTTATCTCAATTATATATCGGATGTCCTTTGTCATACATAAGATTTTAAAAGACGCAAGGAGCAGCCGGTTGGGGCCTAGCAAGTGCCTATTGATATTTCAAAAAAAAAGAAAAGAAAAAGAAAAGCAGAAGAATACAATAAAGTACATGTATCCAACAAGTCCAAAATTTAAAAACATACATGTACCCAACAAAAGAAAATATAATAATATAGGATACTTACAAAGTTGCAAGGCTAGGCATCACTGTCTTCTTGTCCATATCCCTCCAAGACTATCTCCGTGTTGGACTCAAATTCAGCTTCTTCATCATCTTTTTCTTCTTCTTTCATTTCTAGAACTCCTCCTAGGCTCTAGGGAACTACCCACCTCTGATGTCTCTCCATCCATTCCCAAACCAAACTCAAGTTCTTCATCACCACCATCCACAATCCATCCTTGCACCATACTAGTTATCATGCAAGTAGTATGTCCACTTTCTAGACATAGACTAAATTATTTAACCTTATTGCATCTAGTCTATTCATTTTCTTTGTATGTATCCCTTAAAGTGTGCTCAAATTTCTCTCACAACTTGATGAGCTTTAGGTACACCATTTTTCATAATTATATCACCATGCAACTAAGGAAGAAAAAAAGCACACAATTAATTCATATCCAGATTATAGTTGTGATCATTCTCAACGCATCCAATCTTAGGCAAATGTCTTCCAAAGCCACTTTCTTTGCCTCTATACTTATGCATCTCAACATTTATCACTTGGTTTTGGACCTCATAGTTATCAGGGAAGAACTTCTCAACACAAGCAAAAATCCCATCCATGACATTGGATCATGTTGTGGCCCACCAAATCTAATGGACTATCAATTGGCCTCATTGTTCTTGAATGCCTCTTTAATCTCCCTCTTTACTTTTTGTAGCTCTCCATACAATAACCTCATTGATGACTTTTTATCCCCATCCAGAATTCGAAGTACCTTAAATAAAGGTGCACTCACAACATATGTTGTTTTCCCCTTTGTACTCTTGGAATGTTTGCATTGTTCCTATTCATCACCATCAACCATAATCTTCAAGTCTTTTTTCTTATCACTTAAGCTTTGCATTGTGAGGAAAAAAGTTGCAAATCTAATGACTCCAGGCCAAAATTTTATGATGTGCATAAATAAAGATAGTGAAAGTCTTTACTTTGTCAATAACTCCTTTGAACTTAGGGAGATTACCAATCCTTTGAAGCATGAGATTCAAAGTGTGAGTGCACGTTGCCCATCGCCATATTGCCCAATTTTCAGCACACTTGTCAACATATTCAAAGATGTATTCCCCGGTGTGTGCTTCACTAGAGCATTCCTCAGAACAAACAAATATGGTGTGCCTTCCTTGCAATTGACATACAAATTTATTATGCTTCTTTTTTTTGGGTCACTCCAAGCATTGGTTATGATTGAGCAACCATTCAAAGGAAATTATGTTAATACTTATAAAATATCCAACAATAAATTTACACCTATTTTGCTAGTTGTTGAAGTGCTTTGGAATGAAAGCTTAAAACATAAATACAATTGCAAATGTACTGAACTACAAAAGGAACTTAGAAAAGGTAGGCTACAAAACTTTAAAGTCTTTTTGTGCTGTGAGTTGAGTGTCCTTGTGTTTTGTCTTTCTGCTACCTTATATAGAACAAACTTATCCTTCATGGCTCGTTTATGTAACCGTAATCAAAATAAGAGGAATTGGAATGAAGAGGAGTCAGAATTGGGAATTCAACTGACTTCATATAAGTTGTTTATTAGCCCTTATTTTTTTGTTTTATTTTATTCTATATTTATTTTTAAAAACGTTTTAATAAGTTATTTTTATTTATTTAACATATATATATACACACACACACACACACACAAAAGCCTAAAACCCAGCCATCAAAGCCGTCAAGACCAGACAAGCATCGACATCGCTAAGGTCGCGATCGTAATCGTCAAAGCAACGTCGTACGAGGATGAGCCAACGAGCGAGAAGCACGTCCGCGAAATACTGGCGTTAACGTCATCGTCTCGGGGCTACATCCACGCTTTCTGTCATCAGTGTCGAAGCGTCTGCCGTCTGGTCCATCGCCTCCTGAACTATGGTGATCTGGTGTTCGTGAATGAGATCTCATATATGACCCACAAGGTCTCTTTACCTATCGGATTTCATGAAGGCGATAGGAAGAGCAAATGTATTCCTGATTCCCTCACCATCCGGGAATTCAATTACCTCATACATAGAGGGAGTCCAATTCCTCCAACATCAGGAATTGAATTCCATTTTTCTTGTGGGTCCCACAAACTCTTGATTCCTCCCAATGTCACATTCCGATTATGGGTTGGTAAACACGTCCCCAGTATAATCTTTTTACTCTCGAACCCATTTTTAGTTTTATCTGAGCATGTTTCCTTCCTTTTCATTTTTTACCTAGGTAGGTTAAATCAAGACCTGCCTAATAATTCCAATGTGTATAAATATTGCGACACAATACAAAAGTGTACAACAACTCAGAATCCAGAGGAAAATAAAAAAATAATAGTAATGTCAAAACTATGTGTTGGACCGAATCTGAAGTGGCTAATTATGTGGGCCCCCACGTACTCAAGCCCAGGATTTGAATGGGAAACGGGGTTGCCCTGCCCACGGTCACGTCCCTTTCCACGATACGACACTGTTCGGGCAGCTCTCCCTCTCCCTGCTTTTTGCACTCTCACTCCACACTCTCTCTCACTCATCGCTCTCTGTGTGTGCGCACGCCTCACTCAAAAAAGCGAAATTAGAAAAATAAAAATAAAAATAAAAAATAAAGAGAGAGAGAGAGAGAGATAA

Protein Analysis

1545

Amino Acids

178.5

Weight (kDa)

9.68

Isoelectric Point (pI)

45.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1413, 3264
Acc16I TGCGCA 1 cut(s) 4558
Acc36I ACCTGC 1 cut(s) 4263
AccB1I GGYRCC 1 cut(s) 1565
AccB7I CCANNNNNTGG 1 cut(s) 3217
AccI GTMKAC 1 cut(s) 551
AccII CGCG 2 cut(s) 3746, 3807
AccIII TCCGGA 1 cut(s) 84
AciI CCGC 3 cut(s) 496, 1124, 3805
AclI AACGTT 1 cut(s) 3621
AclWI GGATC 5 cut(s) 487, 500, 587, 1030, 2620
AcoI YGGCCR 2 cut(s) 324, 355
AcuI CTGAAG 2 cut(s) 1247, 4397
AcvI CACGTG 1 cut(s) 143
AflII CTTAAG 1 cut(s) 2876
AflIII ACRYGT 3 cut(s) 1929, 1963, 4153
AhdI GACNNNNNGTC 1 cut(s) 918
AhlI ACTAGT 4 cut(s) 251, 431, 1067, 2230
AjiI CACGTC 3 cut(s) 3802, 4156, 4457
AjnI CCWGG 4 cut(s) 73, 488, 2920, 4414
AjuI GAANNNNNNNTTGG 6 cut(s) 2173, 2205, 2486, 2518, 4115, 4147
Alw21I GWGCWC 3 cut(s) 2339, 2776, 3043
Alw26I GTCTC 5 cut(s) 233, 905, 2164, 3837, 3958
Alw44I GTGCAC 2 cut(s) 2772, 3039
AlwI GGATC 5 cut(s) 487, 500, 587, 1030, 2620
Ama87I CYCGRG 1 cut(s) 3834
Aor13HI TCCGGA 1 cut(s) 84
AoxI GGCC 9 cut(s) 286, 324, 355, 1229, 1856, 2623, 2652, 2923, 4395
ApaI GGGCCC 1 cut(s) 4399
ApaLI GTGCAC 2 cut(s) 2772, 3039
ApeKI GCWGC 7 cut(s) 146, 182, 709, 730, 817, 1845, 4487
AseI ATTAAT 2 cut(s) 375, 2429
Asp700I GAANNNNTTC 1 cut(s) 2574
AspA2I CCTAGG 3 cut(s) 64, 2128, 4234
AspLEI GCGC 1 cut(s) 4559
AsuC2I CCSGG 3 cut(s) 1233, 3108, 4022
AsuHPI GGTGA 8 cut(s) 902, 1091, 1597, 2190, 2386, 2829, 3920, 4006
AsuII TTCGAA 1 cut(s) 2752
AvaI CYCGRG 1 cut(s) 3834
AvaII GGWCC 9 cut(s) 29, 61, 71, 78, 121, 2551, 3886, 4098, 4367
AvrII CCTAGG 3 cut(s) 64, 2128, 4234
BaeGI GKGCMC 5 cut(s) 142, 345, 2776, 3043, 4399
BalI TGGCCA 2 cut(s) 326, 357
BamHI GGATCC 1 cut(s) 492
BanI GGYRCC 1 cut(s) 1565
BanII GRGCYC 1 cut(s) 4399
BarI GAAGNNNNNNTAC 4 cut(s) 99, 131, 847, 879
BbrPI CACGTG 1 cut(s) 143
BbsI GAAGAC 5 cut(s) 300, 969, 1166, 2024, 2481
Bbv12I GWGCWC 3 cut(s) 2339, 2776, 3043
BbvI GCAGC 7 cut(s) 158, 194, 696, 717, 804, 1857, 4499
BceAI ACGGC 2 cut(s) 3693, 3864
BcgI CGANNNNNNTGC 8 cut(s) 322, 356, 722, 756, 3715, 3749, 3858, 3892
BciT130I CCWGG 4 cut(s) 75, 490, 2922, 4416
BciVI GTATCC 3 cut(s) 1944, 1991, 2332
BclI TGATCA 1 cut(s) 2454
BcnI CCSGG 3 cut(s) 1233, 3108, 4022
BcoDI GTCTC 5 cut(s) 233, 905, 2164, 3837, 3958
BcuI ACTAGT 4 cut(s) 251, 431, 1067, 2230
BfmI CTRYAG 1 cut(s) 559
BfrI CTTAAG 1 cut(s) 2876
BfuAI ACCTGC 1 cut(s) 4263
BfuI GTATCC 3 cut(s) 1944, 1991, 2332
BglII AGATCT 1 cut(s) 3930
BisI GCNGC 7 cut(s) 147, 183, 710, 731, 818, 1846, 4488
BlnI CCTAGG 3 cut(s) 64, 2128, 4234
BlsI GCNGC 7 cut(s) 148, 184, 711, 732, 819, 1847, 4489
Bme1390I CCNGG 7 cut(s) 75, 490, 1233, 2922, 3108, 4022, 4416
Bme18I GGWCC 9 cut(s) 29, 61, 71, 78, 121, 2551, 3886, 4098, 4367
BmeRI GACNNNNNGTC 1 cut(s) 918
BmeT110I CYCGRG 1 cut(s) 3834
BmgBI CACGTC 3 cut(s) 3802, 4156, 4457
BmrFI CCNGG 7 cut(s) 75, 490, 1233, 2922, 3108, 4022, 4416
BmrI ACTGGG 1 cut(s) 4155
BmsI GCATC 6 cut(s) 840, 2032, 2302, 2477, 2533, 3735
BmuI ACTGGG 1 cut(s) 4155
BpiI GAAGAC 5 cut(s) 300, 969, 1166, 2024, 2481
BplI GAGNNNNNCTC 2 cut(s) 3117, 3149
BpmI CTGGAG 1 cut(s) 2904
Bpu10I CCTNAGC 1 cut(s) 3738
Bpu14I TTCGAA 1 cut(s) 2752
BpuEI CTTGAG 3 cut(s) 1529, 2170, 4393
BpuMI CCSGG 3 cut(s) 1233, 3108, 4022
BsaAI YACGTR 2 cut(s) 143, 4404
BsaBI GATNNNNATC 1 cut(s) 3752
BsaI GGTCTC 1 cut(s) 3958
BsaJI CCNNGG 9 cut(s) 64, 74, 168, 263, 2128, 3106, 4234, 4414, 4448
BsaWI WCCGGW 2 cut(s) 84, 1358
BsaXI ACNNNNNCTCC 4 cut(s) 737, 767, 4504, 4534
Bse118I RCCGGY 1 cut(s) 1848
Bse1I ACTGG 3 cut(s) 1640, 3819, 4161
Bse3DI GCAATG 1 cut(s) 1671
Bse8I GATNNNNATC 1 cut(s) 3752
BseAI TCCGGA 1 cut(s) 84
BseBI CCWGG 4 cut(s) 75, 490, 2922, 4416
BseDI CCNNGG 9 cut(s) 64, 74, 168, 263, 2128, 3106, 4234, 4414, 4448
BseJI GATNNNNATC 1 cut(s) 3752
BseMI GCAATG 1 cut(s) 1671
BseMII CTCAG 3 cut(s) 3148, 4194, 4328
BseNI ACTGG 3 cut(s) 1640, 3819, 4161
BseRI GAGGAG 2 cut(s) 2114, 3542
BseSI GKGCMC 5 cut(s) 142, 345, 2776, 3043, 4399
BseXI GCAGC 7 cut(s) 158, 194, 696, 717, 804, 1857, 4499
BseYI CCCAGC 1 cut(s) 3695
BsgI GTGCAG 1 cut(s) 165
Bsh1236I CGCG 2 cut(s) 3746, 3807
Bsh1285I CGRYCG 1 cut(s) 3750
BshFI GGCC 9 cut(s) 288, 326, 357, 1231, 1858, 2625, 2654, 2925, 4397
BshNI GGYRCC 1 cut(s) 1565
BsiEI CGRYCG 1 cut(s) 3750
BsiHKAI GWGCWC 3 cut(s) 2339, 2776, 3043
BsiHKCI CYCGRG 1 cut(s) 3834
BsiSI CCGG 6 cut(s) 85, 1233, 1359, 1849, 3108, 4021
BsiWI CGTACG 1 cut(s) 3771
BslFI GGGAC 7 cut(s) 74, 91, 134, 259, 4084, 4142, 4443
BsmAI GTCTC 5 cut(s) 233, 905, 2164, 3837, 3958
BsmBI CGTCTC 2 cut(s) 905, 3837
BsmFI GGGAC 7 cut(s) 74, 91, 134, 259, 4084, 4142, 4443
BsmI GAATGC 3 cut(s) 1118, 2674, 3128
BsnI GGCC 9 cut(s) 288, 326, 357, 1231, 1858, 2625, 2654, 2925, 4397
Bso31I GGTCTC 1 cut(s) 3958
BsoBI CYCGRG 1 cut(s) 3834
Bsp119I TTCGAA 1 cut(s) 2752
Bsp120I GGGCCC 1 cut(s) 4395
Bsp1286I GDGCHC 6 cut(s) 142, 345, 2339, 2776, 3043, 4399
Bsp13I TCCGGA 1 cut(s) 84
Bsp1407I TGTACA 1 cut(s) 4304
Bsp143I GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
Bsp19I CCATGG 2 cut(s) 168, 263
Bsp68I TCGCGA 1 cut(s) 3746
BspACI CCGC 3 cut(s) 496, 1124, 3805
BspANI GGCC 9 cut(s) 288, 326, 357, 1231, 1858, 2625, 2654, 2925, 4397
BspCNI CTCAG 3 cut(s) 3147, 4195, 4327
BspEI TCCGGA 1 cut(s) 84
BspFNI CGCG 2 cut(s) 3746, 3807
BspHI TCATGA 1 cut(s) 3973
BspMI ACCTGC 1 cut(s) 4263
BspPI GGATC 5 cut(s) 487, 500, 587, 1030, 2620
BspQI GCTCTTC 1 cut(s) 3983
BspT104I TTCGAA 1 cut(s) 2752
BspT107I GGYRCC 1 cut(s) 1565
BspTI CTTAAG 1 cut(s) 2876
BspTNI GGTCTC 1 cut(s) 3958
BsrDI GCAATG 1 cut(s) 1671
BsrFI RCCGGY 1 cut(s) 1848
BsrGI TGTACA 1 cut(s) 4304
BsrI ACTGG 3 cut(s) 1640, 3819, 4161
BssAI RCCGGY 1 cut(s) 1848
BssECI CCNNGG 9 cut(s) 64, 74, 168, 263, 2128, 3106, 4234, 4414, 4448
BssMI GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
BssT1I CCWWGG 5 cut(s) 64, 168, 263, 2128, 4234
Bst2UI CCWGG 4 cut(s) 75, 490, 2922, 4416
Bst4CI ACNGT 4 cut(s) 2030, 3497, 4452, 4480
Bst6I CTCTTC 5 cut(s) 146, 200, 911, 3519, 3983
BstAFI CTTAAG 1 cut(s) 2876
BstAUI TGTACA 1 cut(s) 4304
BstBAI YACGTR 2 cut(s) 143, 4404
BstBI TTCGAA 1 cut(s) 2752
BstC8I GCNNGC 6 cut(s) 180, 791, 815, 1520, 1524, 4561
BstDSI CCRYGG 3 cut(s) 168, 263, 4448
BstFNI CGCG 2 cut(s) 3746, 3807
BstHHI GCGC 1 cut(s) 4559
BstKTI GATC 8 cut(s) 495, 582, 1038, 2457, 2615, 3750, 3913, 3933
BstMAI GTCTC 5 cut(s) 233, 905, 2164, 3837, 3958
BstMBI GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
BstMCI CGRYCG 1 cut(s) 3750
BstMWI GCNNNNNNNGC 5 cut(s) 146, 1132, 3163, 3705, 3743
BstNI CCWGG 4 cut(s) 75, 490, 2922, 4416
BstNSI RCATGY 5 cut(s) 182, 1736, 1933, 1967, 4211
BstSCI CCNGG 7 cut(s) 73, 488, 1231, 2920, 3106, 4020, 4414
BstSFI CTRYAG 1 cut(s) 559
BstSLI GKGCMC 5 cut(s) 142, 345, 2776, 3043, 4399
BstUI CGCG 2 cut(s) 3746, 3807
BstV1I GCAGC 7 cut(s) 158, 194, 696, 717, 804, 1857, 4499
BstV2I GAAGAC 5 cut(s) 300, 969, 1166, 2024, 2481
BstX2I RGATCY 3 cut(s) 492, 579, 3930
BstXI CCANNNNNNTGG 1 cut(s) 2609
BstYI RGATCY 3 cut(s) 492, 579, 3930
BsuI GTATCC 3 cut(s) 1944, 1991, 2332
BsuRI GGCC 9 cut(s) 288, 326, 357, 1231, 1858, 2625, 2654, 2925, 4397
BtgI CCRYGG 3 cut(s) 168, 263, 4448
BtgZI GCGATG 4 cut(s) 3036, 3718, 3875, 4525
BtrI CACGTC 3 cut(s) 3802, 4156, 4457
BtsI GCAGTG 2 cut(s) 192, 499
BtsIMutI CAGTG 5 cut(s) 192, 499, 2026, 3869, 4476
BtuMI TCGCGA 1 cut(s) 3746
BveI ACCTGC 1 cut(s) 4263
Cac8I GCNNGC 6 cut(s) 180, 791, 815, 1520, 1524, 4561
CciI TCATGA 1 cut(s) 3973
CfoI GCGC 1 cut(s) 4559
Cfr10I RCCGGY 1 cut(s) 1848
CseI GACGC 2 cut(s) 1844, 3862
CspCI CAANNNNNGTGG 2 cut(s) 2488, 2523
DpnI GATC 8 cut(s) 494, 581, 1037, 2456, 2614, 3749, 3912, 3932
DpnII GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
DraI TTTAAA 6 cut(s) 42, 766, 1830, 1954, 3400, 3616
DriI GACNNNNNGTC 1 cut(s) 918
EaeI YGGCCR 2 cut(s) 324, 355
Eam1104I CTCTTC 5 cut(s) 146, 200, 911, 3519, 3983
Eam1105I GACNNNNNGTC 1 cut(s) 918
EarI CTCTTC 5 cut(s) 146, 200, 911, 3519, 3983
EciI GGCGGA 1 cut(s) 485
Eco130I CCWWGG 5 cut(s) 64, 168, 263, 2128, 4234
Eco24I GRGCYC 1 cut(s) 4399
Eco31I GGTCTC 1 cut(s) 3958
Eco32I GATATC 1 cut(s) 1452
Eco47I GGWCC 9 cut(s) 29, 61, 71, 78, 121, 2551, 3886, 4098, 4367
Eco57I CTGAAG 2 cut(s) 1247, 4397
Eco72I CACGTG 1 cut(s) 143
Eco88I CYCGRG 1 cut(s) 3834
EcoO109I RGGNCCY 8 cut(s) 61, 71, 78, 121, 286, 1856, 4098, 4396
EcoRI GAATTC 5 cut(s) 655, 2748, 3543, 4025, 4079
EcoRII CCWGG 4 cut(s) 73, 488, 2920, 4414
EcoRV GATATC 1 cut(s) 1452
EcoT14I CCWWGG 5 cut(s) 64, 168, 263, 2128, 4234
EcoT22I ATGCAT 2 cut(s) 1118, 2526
EcoT38I GRGCYC 1 cut(s) 4399
ErhI CCWWGG 5 cut(s) 64, 168, 263, 2128, 4234
Esp3I CGTCTC 2 cut(s) 905, 3837
FalI AAGNNNNNCTT 2 cut(s) 87, 119
FaqI GGGAC 7 cut(s) 74, 91, 134, 259, 4084, 4142, 4443
FauI CCCGC 1 cut(s) 1131
FauNDI CATATG 1 cut(s) 2785
FbaI TGATCA 1 cut(s) 2454
FblI GTMKAC 1 cut(s) 551
Fnu4HI GCNGC 7 cut(s) 147, 183, 710, 731, 818, 1846, 4488
FriOI GRGCYC 1 cut(s) 4399
Fsp4HI GCNGC 7 cut(s) 147, 183, 710, 731, 818, 1846, 4488
FspAI RTGCGCAY 1 cut(s) 4558
FspI TGCGCA 1 cut(s) 4558
GlaI GCGC 1 cut(s) 4558
GluI GCNGC 7 cut(s) 147, 183, 710, 731, 818, 1846, 4488
GsaI CCCAGC 1 cut(s) 3699
GsuI CTGGAG 1 cut(s) 2904
HaeIII GGCC 9 cut(s) 288, 326, 357, 1231, 1858, 2625, 2654, 2925, 4397
HapII CCGG 6 cut(s) 85, 1233, 1359, 1849, 3108, 4021
HgaI GACGC 2 cut(s) 1844, 3862
HhaI GCGC 1 cut(s) 4559
Hin6I GCGC 1 cut(s) 4557
HinP1I GCGC 1 cut(s) 4557
HincII GTYRAC 3 cut(s) 923, 3085, 3822
HindII GTYRAC 3 cut(s) 923, 3085, 3822
HindIII AAGCTT 3 cut(s) 1282, 2879, 3325
HpaI GTTAAC 1 cut(s) 3822
HpaII CCGG 6 cut(s) 85, 1233, 1359, 1849, 3108, 4021
HphI GGTGA 8 cut(s) 902, 1091, 1597, 2190, 2386, 2829, 3920, 4006
Hpy99I CGWCG 1 cut(s) 3772
HpyAV CCTTC 9 cut(s) 125, 288, 570, 752, 1339, 3168, 3484, 3971, 4225
HpyCH4III ACNGT 4 cut(s) 2030, 3497, 4452, 4480
HpyCH4IV ACGT 9 cut(s) 142, 3043, 3621, 3767, 3801, 3824, 4155, 4403, 4456
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 1132, 3163, 3705, 3743
HpySE526I ACGT 9 cut(s) 142, 3043, 3621, 3767, 3801, 3824, 4155, 4403, 4456
HspAI GCGC 1 cut(s) 4557
KflI GGGWCCC 3 cut(s) 78, 121, 4098
Kpn2I TCCGGA 1 cut(s) 84
Ksp22I TGATCA 1 cut(s) 2454
KspAI GTTAAC 1 cut(s) 3822
Kzo9I GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
LguI GCTCTTC 1 cut(s) 3983
LmnI GCTCC 2 cut(s) 1156, 1842
Lsp1109I GCAGC 7 cut(s) 158, 194, 696, 717, 804, 1857, 4499
LweI GCATC 6 cut(s) 840, 2032, 2302, 2477, 2533, 3735
MaeII ACGT 9 cut(s) 142, 3043, 3621, 3767, 3801, 3824, 4155, 4403, 4456
MaeIII GTNAC 8 cut(s) 539, 854, 1043, 1396, 3204, 3491, 4126, 4452
MalI GATC 8 cut(s) 494, 581, 1037, 2456, 2614, 3749, 3912, 3932
MboI GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
MfeI CAATTG 5 cut(s) 774, 1379, 2648, 3167, 3343
MflI RGATCY 3 cut(s) 492, 579, 3930
MhlI GDGCHC 6 cut(s) 142, 345, 2339, 2776, 3043, 4399
MlsI TGGCCA 2 cut(s) 326, 357
MluNI TGGCCA 2 cut(s) 326, 357
MlyI GAGTC 9 cut(s) 290, 746, 928, 1040, 1091, 2065, 2911, 3539, 4060
MmeI TCCRAC 8 cut(s) 56, 1070, 1167, 1961, 2048, 3297, 4088, 4345
Mox20I TGGCCA 2 cut(s) 326, 357
Mph1103I ATGCAT 2 cut(s) 1118, 2526
MroI TCCGGA 1 cut(s) 84
MroXI GAANNNNTTC 1 cut(s) 2574
MscI TGGCCA 2 cut(s) 326, 357
MslI CAYNNNNRTG 2 cut(s) 173, 1443
Msp20I TGGCCA 2 cut(s) 326, 357
MspA1I CMGCKG 1 cut(s) 817
MspCI CTTAAG 1 cut(s) 2876
MspI CCGG 6 cut(s) 85, 1233, 1359, 1849, 3108, 4021
MspR9I CCNGG 7 cut(s) 75, 490, 1233, 2922, 3108, 4022, 4416
MunI CAATTG 5 cut(s) 774, 1379, 2648, 3167, 3343
Mva1269I GAATGC 3 cut(s) 1118, 2674, 3128
MvaI CCWGG 4 cut(s) 75, 490, 2922, 4416
MvnI CGCG 2 cut(s) 3746, 3807
MwoI GCNNNNNNNGC 5 cut(s) 146, 1132, 3163, 3705, 3743
NciI CCSGG 3 cut(s) 1233, 3108, 4022
NcoI CCATGG 2 cut(s) 168, 263
NdeI CATATG 1 cut(s) 2785
NdeII GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
NmuCI GTSAC 4 cut(s) 1043, 3204, 4126, 4452
NruI TCGCGA 1 cut(s) 3746
NsbI TGCGCA 1 cut(s) 4558
NsiI ATGCAT 2 cut(s) 1118, 2526
NspI RCATGY 5 cut(s) 182, 1736, 1933, 1967, 4211
NspV TTCGAA 1 cut(s) 2752
PaeI GCATGC 1 cut(s) 182
PagI TCATGA 1 cut(s) 3973
PciI ACATGT 2 cut(s) 1929, 1963
PciSI GCTCTTC 1 cut(s) 3983
PctI GAATGC 3 cut(s) 1118, 2674, 3128
PdmI GAANNNNTTC 1 cut(s) 2574
PfeI GAWTC 6 cut(s) 1558, 3025, 4007, 4114, 4318, 4372
Pfl23II CGTACG 1 cut(s) 3771
PflMI CCANNNNNTGG 1 cut(s) 3217
PfoI TCCNGGA 2 cut(s) 488, 4020
PkrI GCNGC 7 cut(s) 148, 184, 711, 732, 819, 1847, 4489
Ple19I CGATCG 1 cut(s) 3750
PleI GAGTC 9 cut(s) 290, 746, 927, 1040, 1090, 2065, 2911, 3538, 4059
PmaCI CACGTG 1 cut(s) 143
PmlI CACGTG 1 cut(s) 143
PpsI GAGTC 9 cut(s) 290, 746, 927, 1040, 1090, 2065, 2911, 3538, 4059
Ppu21I YACGTR 2 cut(s) 143, 4404
PpuMI RGGWCCY 5 cut(s) 61, 71, 78, 121, 4098
PscI ACATGT 2 cut(s) 1929, 1963
PshBI ATTAAT 2 cut(s) 375, 2429
PsiI TTATAA 2 cut(s) 1413, 3264
Psp1406I AACGTT 1 cut(s) 3621
Psp5II RGGWCCY 5 cut(s) 61, 71, 78, 121, 4098
Psp6I CCWGG 4 cut(s) 73, 488, 2920, 4414
PspCI CACGTG 1 cut(s) 143
PspFI CCCAGC 1 cut(s) 3695
PspGI CCWGG 4 cut(s) 73, 488, 2920, 4414
PspLI CGTACG 1 cut(s) 3771
PspOMI GGGCCC 1 cut(s) 4395
PspPPI RGGWCCY 5 cut(s) 61, 71, 78, 121, 4098
PsuI RGATCY 3 cut(s) 492, 579, 3930
PvuI CGATCG 1 cut(s) 3750
PvuII CAGCTG 1 cut(s) 817
RruI TCGCGA 1 cut(s) 3746
RseI CAYNNNNRTG 2 cut(s) 173, 1443
SapI GCTCTTC 1 cut(s) 3983
SatI GCNGC 7 cut(s) 147, 183, 710, 731, 818, 1846, 4488
Sau3AI GATC 8 cut(s) 492, 579, 1035, 2454, 2612, 3747, 3910, 3930
SchI GAGTC 9 cut(s) 290, 746, 928, 1040, 1091, 2065, 2911, 3539, 4060
ScrFI CCNGG 7 cut(s) 75, 490, 1233, 2922, 3108, 4022, 4416
SduI GDGCHC 6 cut(s) 142, 345, 2339, 2776, 3043, 4399
SfaNI GCATC 6 cut(s) 840, 2032, 2302, 2477, 2533, 3735
SfcI CTRYAG 1 cut(s) 559
SfuI TTCGAA 1 cut(s) 2752
SinI GGWCC 9 cut(s) 29, 61, 71, 78, 121, 2551, 3886, 4098, 4367
SmiMI CAYNNNNRTG 2 cut(s) 173, 1443
SmlI CTYRAG 4 cut(s) 1508, 2185, 2876, 4408
SmoI CTYRAG 4 cut(s) 1508, 2185, 2876, 4408
SpeI ACTAGT 4 cut(s) 251, 431, 1067, 2230
SphI GCATGC 1 cut(s) 182
SsiI CCGC 3 cut(s) 496, 1124, 3805
SspI AATATT 2 cut(s) 615, 4283
StyD4I CCNGG 7 cut(s) 73, 488, 1231, 2920, 3106, 4020, 4414
StyI CCWWGG 5 cut(s) 64, 168, 263, 2128, 4234
TaaI ACNGT 4 cut(s) 2030, 3497, 4452, 4480
TaiI ACGT 9 cut(s) 145, 3046, 3624, 3770, 3804, 3827, 4158, 4406, 4459
TaqI TCGA 8 cut(s) 111, 332, 742, 1254, 2752, 3729, 3868, 4181
TaqII GACCGA 2 cut(s) 588, 4384
TatI WGTACW 5 cut(s) 566, 1926, 2803, 3353, 4304
TfiI GAWTC 6 cut(s) 1558, 3025, 4007, 4114, 4318, 4372
TscAI CASTG 5 cut(s) 192, 506, 2033, 3869, 4483
TseFI GTSAC 4 cut(s) 1043, 3204, 4126, 4452
TseI GCWGC 7 cut(s) 146, 182, 709, 730, 817, 1845, 4487
Tsp45I GTSAC 4 cut(s) 1043, 3204, 4126, 4452
TspGWI ACGGA 2 cut(s) 537, 2052
TspRI CASTG 5 cut(s) 192, 506, 2033, 3869, 4483
Van91I CCANNNNNTGG 1 cut(s) 3217
Vha464I CTTAAG 1 cut(s) 2876
VneI GTGCAC 2 cut(s) 2772, 3039
VpaK11BI GGWCC 9 cut(s) 29, 61, 71, 78, 121, 2551, 3886, 4098, 4367
VspI ATTAAT 2 cut(s) 375, 2429
XbaI TCTAGA 2 cut(s) 2116, 2261
XceI RCATGY 5 cut(s) 182, 1736, 1933, 1967, 4211
XcmI CCANNNNNNNNNTGG 2 cut(s) 4091, 4422
XmaJI CCTAGG 3 cut(s) 64, 2128, 4234
XmiI GTMKAC 1 cut(s) 551
XmnI GAANNNNTTC 1 cut(s) 2574
Zsp2I ATGCAT 2 cut(s) 1118, 2526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.