pycom05g05150

SUMO-activating enzyme subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
6119581 .. 6119889
309 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 309 bp
ATGGTTCTATCTGGGTGGACTCAAGCTCCTGCAGTGGCACAGGATGACAAGAAGTCTACTGCAAATGCTGGAAGCTCATCAAATGCATCATCATCTATGGAGCCTGAAAAGACTGATGATATTGAAACTACTCCTGAAAAGAAAAGAAAACTGTCTGAGGTTTCTGAGTCCGCGAATCCAGATTTATCAAGTGTTGCTGGCAGTAGTACAAGAAATCCCGAGAAATTGGAACTTGATGATGACGACGATGAGCTTGTCATATTTGATAAGTGGGATTCGGTCACGGACAAGAAGATAAAGTTGCAATAG

Protein Analysis

103

Amino Acids

11.07

Weight (kDa)

4.39

Isoelectric Point (pI)

44.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 56
AccII CGCG 1 cut(s) 173
AciI CCGC 1 cut(s) 171
AfaI GTAC 1 cut(s) 208
AgsI TTSAA 1 cut(s) 125
AhdI GACNNNNNGTC 1 cut(s) 52
AluBI AGCT 3 cut(s) 26, 75, 253
AluI AGCT 3 cut(s) 26, 75, 253
Ama87I CYCGRG 1 cut(s) 218
AvaI CYCGRG 1 cut(s) 218
BfmI CTRYAG 1 cut(s) 30
BmeRI GACNNNNNGTC 1 cut(s) 52
BmeT110I CYCGRG 1 cut(s) 218
BmiI GGNNCC 1 cut(s) 102
BmsI GCATC 1 cut(s) 95
BpuEI CTTGAG 1 cut(s) 6
BsaXI ACNNNNNCTCC 2 cut(s) 10, 40
BseGI GGATG 1 cut(s) 49
BseMII CTCAG 2 cut(s) 147, 156
Bsh1236I CGCG 1 cut(s) 173
BsiHKCI CYCGRG 1 cut(s) 218
BsoBI CYCGRG 1 cut(s) 218
BspACI CCGC 1 cut(s) 171
BspCNI CTCAG 2 cut(s) 148, 157
BspFNI CGCG 1 cut(s) 173
BspLI GGNNCC 1 cut(s) 102
BspMAI CTGCAG 1 cut(s) 34
Bst4CI ACNGT 1 cut(s) 153
BstC8I GCNNGC 1 cut(s) 199
BstDEI CTNAG 2 cut(s) 156, 165
BstF5I GGATG 1 cut(s) 49
BstFNI CGCG 1 cut(s) 173
BstSFI CTRYAG 1 cut(s) 30
BstUI CGCG 1 cut(s) 173
BtsCI GGATG 1 cut(s) 49
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 1 cut(s) 39
Cac8I GCNNGC 1 cut(s) 199
Csp6I GTAC 1 cut(s) 207
CviJI RGCY 4 cut(s) 26, 75, 103, 253
CviKI_1 RGCY 4 cut(s) 26, 75, 103, 253
CviQI GTAC 1 cut(s) 207
DdeI CTNAG 2 cut(s) 156, 165
DriI GACNNNNNGTC 1 cut(s) 52
Eam1105I GACNNNNNGTC 1 cut(s) 52
Eco88I CYCGRG 1 cut(s) 218
EcoT22I ATGCAT 1 cut(s) 88
FaiI YATR 2 cut(s) 98, 260
FblI GTMKAC 1 cut(s) 56
FokI GGATG 1 cut(s) 56
HinfI GANTC 4 cut(s) 19, 167, 175, 275
Hpy166II GTNNAC 2 cut(s) 18, 57
Hpy188I TCNGA 2 cut(s) 157, 166
Hpy188III TCNNGA 3 cut(s) 134, 179, 218
Hpy8I GTNNAC 2 cut(s) 18, 57
Hpy99I CGWCG 1 cut(s) 248
HpyCH4III ACNGT 1 cut(s) 153
HpyCH4V TGCA 4 cut(s) 32, 62, 86, 304
HpyF3I CTNAG 2 cut(s) 156, 165
LmnI GCTCC 2 cut(s) 31, 100
LpnPI CCDG 7 cut(s) 26, 42, 54, 117, 147, 183, 192
LweI GCATC 1 cut(s) 95
MaeIII GTNAC 1 cut(s) 280
MboII GAAGA 1 cut(s) 304
MluCI AATT 1 cut(s) 224
MlyI GAGTC 2 cut(s) 13, 176
MnlI CCTC 1 cut(s) 151
Mph1103I ATGCAT 1 cut(s) 88
MvnI CGCG 1 cut(s) 173
NlaIV GGNNCC 1 cut(s) 102
NmuCI GTSAC 1 cut(s) 280
NsiI ATGCAT 1 cut(s) 88
PfeI GAWTC 2 cut(s) 175, 275
PleI GAGTC 2 cut(s) 13, 175
PpsI GAGTC 2 cut(s) 13, 175
PspN4I GGNNCC 1 cut(s) 102
PstI CTGCAG 1 cut(s) 34
RsaI GTAC 1 cut(s) 208
RsaNI GTAC 1 cut(s) 207
SchI GAGTC 2 cut(s) 13, 176
SetI ASST 4 cut(s) 28, 77, 162, 255
SfaNI GCATC 1 cut(s) 95
SfcI CTRYAG 1 cut(s) 30
SmlI CTYRAG 1 cut(s) 21
SmoI CTYRAG 1 cut(s) 21
Sse9I AATT 1 cut(s) 224
SsiI CCGC 1 cut(s) 171
TaaI ACNGT 1 cut(s) 153
TaqII GACCGA 1 cut(s) 268
TasI AATT 1 cut(s) 224
TatI WGTACW 1 cut(s) 206
TfiI GAWTC 2 cut(s) 175, 275
TscAI CASTG 1 cut(s) 39
TseFI GTSAC 1 cut(s) 280
Tsp45I GTSAC 1 cut(s) 280
TspGWI ACGGA 1 cut(s) 299
TspRI CASTG 1 cut(s) 39
XmiI GTMKAC 1 cut(s) 56
Zsp2I ATGCAT 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.