pycom05g07870

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
10658254 .. 10663677
5424 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3852 bp
ATGTTTTGTTGCATTATTATTCAAACTGCTGTAATAGCAGTTGTTGTTTTATATACATCTTACACACACGCATGTGGCGTGCTTGCTGCCCATGCTGCAACACATCAGAGCATGTGTTCCTTCTGCTGTAAAGGTGGCGTGCTGTCTGACAAGGAATATGTGCAGTATTCCTTCTGTCCAGGTCACATGGGCAAGTTCTCTCAACAGTCTTGTTCCACATCATGTTGTGAAAGAAATTGGTCATCATATAATTTTATACAGCCTTTGAGGAGGAATTGGACAGCACCACAAAGAGCCAAGGATTTGGTATATGTTCATAATAATCTTCGTCTAGGAGGACCAACCTATATTAAAAAATGGCGGGTGTGCTCAAAATTGCAAACCTTTCACTTGCGAACTAGAACTAGAGGTCTAAGACTCGAATCATGTGTTGTTTTAACTATTATTTTTGTGTTTTCATTATCATGTATCGTGAATGAATTTGTTGAACGCAAGTACTTTATGAATTTGAGTATTGTTTTTGATATATGTAATATTTGTTATATTTTAATCGTCGGGTCCTACCCTATGTCGCCATATCAGTATCTATTTCCATGCAACCTAGGCTGCCACTTCATCCACATAGTGCAACCCTCTCTTCTTAGTACCATGCTCAATGATCGCTCGTGTCTAGATATCCAGCAAGCAAAAACTAGGAAACATTATAAAACATTATCAAATGACAAAGAAGTTGTAAGAGTTATGGATCCCGCTCCAATAATAGAGACAACATCACCATTTTGCAATGACAACGATCTCATTAGGACATATGGCTCCGGAATCAATTATCAACATGTGTCATGGTCAGCAGAAGCTACGAAGGCAGTTATCATTATCATCTGGCTTATTGGGTTGGTTTTGCTCCACCGGATAAACAGGTCGAGCAAGGTTGTTGCTAATTCTAAACCTAACACGACCTGTGGCTACAGTAGCACGTCCAGGTCCCGCATCTGCCACCTTTGTCTGGCTCGCGTAATTTCCTTTTTCCTTAAGTTGCATCATTCTCTCAATAAACCACTCCGGGTAACCATGGAGTTCGAAACATGTTTCTTATGTATGCCTTTTCCCATTGCAGTGATTGCATTGAAGCTCTTCCTTCCCAATATCCGTATCAGTGTGGGAATAACGAGAAGTTGTGTCTCTTGTCAAGTTCCTGCCACATGCTTTTCAGCTCTTCATAGTATAAGTTTACTGGGTGACTGTGTAATCATTTGGGTTATGCTCAAATGTCCTTTGCAGTTGGTGGATCGAAAGAAGTCTTACCAAGTGAGGTTCTTTAGTCTTCAGCAACCATCCTCGAGCAATCGCGTCCTCATTTCATGGTCAAGTAGTATAGTTGTCCCAACTCGCAAGCATAAACCTGTAACATCTTTGACCAGATCTTATAATTCGAATCTCAGACTTCTTTTCTTCATCCATCACAGTGAAATCGTTGAGCATATGAATGAGAGTTTTTCTGGTACATTTTTGGATATGGATCGGCGCTGCCTAGAGAACAAAAGGCGGCGCATGTTTGTTTGGGTTGGTTTCAGGTTTCAAAACCAACTGGAAAGGAAAACTTTATTTAGGGTTTTGAATACTTTTCGTTTTATTCTTCTCTCAATAGGAGCACAATATATATATATATATATATATATATATATATATATATATATATATAAGTACAATGATATCAGTGGGGCTTTGGCTTGCTCCAATAAGAATCGATTTTGGGTCACCGCTTGTTGTGGAAGACTGAGAGAAAGAAAGATAAAGTGGCGGTCGGAGACGCATGACGAGACGGGAAAGAACAGCCAAGTCGGATCCAAAATTCGAGAACCCAGACCGAACCCGTTTGGAAATAAAACGGGACAGGGGCAGGGCGGGTCACATTATTTTGAAAAAAATGAATCAATGCCCAACGACAAGACCGTCGGTCGCGGCGACGACACCTTCAACACATTCTTCTCTGAGACCGGTGCCGGCAAGCACATCCCTCTCTCCATCTTTGTCGATCTAGAGCCAACCGTCATTGACGAGGTCTGGAACAACAACTACTGCCAGCTTTCCACCCTGAGCAGCTCATTTCCGGTAAGGAAGGCTCCCTCTGCCTCAACCGCATCAAGAAGATCGCTGACAAATGCATCTGTATTAGACGCAAAGCAGTTATGGGCAGATTGGGAAAGATGGCAGAAGAGAGAATGGTTGGGTCTGCATTTTGTGGAGGATTATAGGGTCACACCTATGAAACTTAATGATGTCATGGACACTTTGATTATGAGAAAGTTTGGATCTGTGGACCAGACAATAATTGGTGTGGGGCATTTGGTGTGGAAATCGAGAAGGTTGATGGATATAGTGTCTGCAATCGCATCAAAGTTGAACTGGGATAAAAACTCTCTGCACATTGAGAGAAAGGAGAAAGCACAGAACAAGGAGCTTTGGCCTACCCTTGGTGCAGATACTTCACCTAATGCATTTCTCTCAACCCTACTAAAGCAACTCCACCATGGGAAAGGCTTCCCAGGCTATTCATTATTTAATTCACCCAGTGAACAATTGAATAGCCTTGGTAACAGAATTTTATTTGTAATTTTGGATAAGATTTTAATCGTTCTCGTTGCGTCATATGCCACGTGTCGTTACTTTTTAAGAATCGTTGAGGATAGATTTCCGATAAGATTTTTAACCAATCATGTTATTTCGATCAGATTTTTAACGAATGACGGCTTCCCACGTGCCACCATCCATCCTCAGAAATCTCACACCAATTTTCTAAAGATCTCTATCATTATTCATAATTTTTGCTTCCTTCTTCACCAAAATCAAAATCTGTATCATTATTCATACAACAAGAGGAGGAATTGTTTAACCAATCAGAAAGAATGTTCAATCTCTAGGTGGCCCAAAATGAGAGGGAAGAGGATGAGGAGCGTAGAAGGAGAGATGACAAAGCAAGAATGGGCAGAGCCTCACATTCCCGTCAAGTCATCCAAGATGTGGGTCAGATCTACAGGCCCAACCGTTCCAGAAACCTTGATAGAAGCAGGCAACAACGAGGTATGGAACTCTTGGACGATTATTTTGTCCGTAATAGTGCATTCCCTGATATATACTTTAGACGTCGTTATACAATTACATGAAGTAGTGAATTTTTGTGTTTTTACAAATGAGGTTATTGCATTTTGGAGAATTGGATTTTCATTTCATTTAGCTCCATCTAAATCAATTCTATGGATACAAAAACCAAATGACAATGTTGGTGATTATGAACCTAAGCCTACGATAATTGAGCTATGTGAAAGGCCGTCTCTCAAATTGTTTGAACCATGGGAATGTTGTAAAAGAGTTGTAAAAAAGCATAAGCTCTTCTTTACTTTTAATTACTCATTTCTTGTTTTATTTGATATGCGTAACTCAAGTCAATTACCATTCCTAGACCGAGATCCAACACTAGGCTCATGTTGGATTGAATCAGAGATTCATAGTCATCCGAAGGCCCTAAGGCAACTATATAGTCCATCAATGAATGCAAAGCTTATGTTAGTAGTACCATATATTATTGTGATGATACCCCTCAACCAAACCATTATTAAGTTGACAAACATGAGAGTCGTTTGTGACTCGTACACCGACTTCACCCTATCATGGGGGAGTACAAAGTGCATGCTTACACTCATAAGGAGTCCTATACATATACATGATGTTGTGAAAGTAGGCAACGAGAATGATCAACATCATATCATTGTGAGGTTGTTCTCGAACCTCTACCCGAACTTTCATGGTGGGAATGACTTAACTAAGTGCAATGGAGCCAACATCATATCATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1284

Amino Acids

147.89

Weight (kDa)

9.41

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7075 PF23272 722 - 815 5.1e-10 Domain of unknown function (DUF7075)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 705, 1425
AasI GACNNNNNNGTC 1 cut(s) 1949
AatII GACGTC 1 cut(s) 3144
AccB1I GGYRCC 1 cut(s) 1997
AccB7I CCANNNNNTGG 1 cut(s) 3018
AccBSI CCGCTC 1 cut(s) 752
AccII CGCG 3 cut(s) 1011, 1347, 1959
AccIII TCCGGA 1 cut(s) 815
AciI CCGC 9 cut(s) 361, 750, 985, 1543, 1758, 1798, 1902, 1959, 2136
AclWI GGATC 8 cut(s) 740, 753, 1293, 1524, 1836, 1849, 2317, 3458
AcsI RAATTY 5 cut(s) 479, 505, 1848, 2598, 3169
AcuI CTGAAG 1 cut(s) 1307
AcvI CACGTG 2 cut(s) 2655, 2756
AcyI GRCGYC 1 cut(s) 3141
AdeI CACNNNGTG 2 cut(s) 625, 2570
AfaI GTAC 7 cut(s) 497, 646, 1501, 1703, 3570, 3647, 3676
AfiI CCNNNNNNNGG 6 cut(s) 1003, 2471, 3018, 3473, 3666, 3667
AflII CTTAAG 1 cut(s) 1028
AflIII ACRYGT 3 cut(s) 832, 1082, 2654
AgeI ACCGGT 1 cut(s) 1994
AhdI GACNNNNNGTC 1 cut(s) 1953
AjiI CACGTC 1 cut(s) 975
AjnI CCWGG 3 cut(s) 178, 977, 2542
AleI CACNNNNGTG 1 cut(s) 72
Alw21I GWGCWC 2 cut(s) 371, 1651
Alw26I GTCTC 6 cut(s) 758, 1183, 1799, 1811, 1985, 3333
AlwI GGATC 8 cut(s) 740, 753, 1293, 1524, 1836, 1849, 2317, 3458
Ama87I CYCGRG 1 cut(s) 1336
Aor13HI TCCGGA 1 cut(s) 815
AoxI GGCC 5 cut(s) 2462, 2921, 3034, 3323, 3516
ApeKI GCWGC 5 cut(s) 86, 95, 606, 1524, 2097
ApoI RAATTY 5 cut(s) 479, 505, 1848, 2598, 3169
ArsI GACNNNNNNTTYG 2 cut(s) 3085, 3117
AsiGI ACCGGT 1 cut(s) 1994
Asp700I GAANNNNTTC 2 cut(s) 1130, 2537
AspA2I CCTAGG 1 cut(s) 601
AspLEI GCGC 2 cut(s) 1524, 1548
AspS9I GGNCC 7 cut(s) 338, 558, 981, 2317, 2922, 3035, 3517
AsuC2I CCSGG 1 cut(s) 1061
AsuHPI GGTGA 8 cut(s) 765, 1247, 1747, 2478, 2556, 2828, 3293, 3649
AsuII TTCGAA 2 cut(s) 1077, 1430
AvaI CYCGRG 1 cut(s) 1336
AvaII GGWCC 4 cut(s) 338, 558, 981, 2317
AvrII CCTAGG 1 cut(s) 601
AxyI CCTNAGG 1 cut(s) 3521
BamHI GGATCC 2 cut(s) 745, 1841
BanI GGYRCC 1 cut(s) 1997
BarI GAAGNNNNNNTAC 2 cut(s) 3638, 3670
BauI CACGAG 1 cut(s) 664
BbrPI CACGTG 2 cut(s) 2655, 2756
BbsI GAAGAC 2 cut(s) 1313, 1777
Bbv12I GWGCWC 2 cut(s) 371, 1651
BbvI GCAGC 5 cut(s) 73, 82, 593, 1511, 2109
BccI CCATC 9 cut(s) 1339, 1464, 2030, 2199, 2362, 2771, 2775, 3244, 3547
BceAI ACGGC 2 cut(s) 2761, 3310
BciT130I CCWGG 3 cut(s) 180, 979, 2544
BciVI GTATCC 1 cut(s) 3249
BclI TGATCA 1 cut(s) 3748
BcnI CCSGG 1 cut(s) 1061
BcoDI GTCTC 6 cut(s) 758, 1183, 1799, 1811, 1985, 3333
BfmI CTRYAG 2 cut(s) 964, 3030
BfoI RGCGCY 1 cut(s) 1525
BfrI CTTAAG 1 cut(s) 1028
BfuI GTATCC 1 cut(s) 3249
BglII AGATCT 3 cut(s) 1418, 2799, 3026
BisI GCNGC 7 cut(s) 87, 96, 607, 1525, 1544, 1960, 2098
BlnI CCTAGG 1 cut(s) 601
BlsI GCNGC 7 cut(s) 88, 97, 608, 1526, 1545, 1961, 2099
BmcAI AGTACT 1 cut(s) 497
Bme1390I CCNGG 4 cut(s) 180, 979, 1061, 2544
Bme18I GGWCC 4 cut(s) 338, 558, 981, 2317
BmeRI GACNNNNNGTC 1 cut(s) 1953
BmeT110I CYCGRG 1 cut(s) 1336
BmgBI CACGTC 1 cut(s) 975
BmgT120I GGNCC 7 cut(s) 338, 558, 981, 2317, 2922, 3035, 3517
BmiI GGNNCC 8 cut(s) 559, 747, 814, 983, 1843, 1999, 2121, 3832
BmrFI CCNGG 4 cut(s) 180, 979, 1061, 2544
BmrI ACTGGG 3 cut(s) 1241, 2413, 2562
BmsI GCATC 5 cut(s) 996, 1045, 2147, 2171, 2399
BmuI ACTGGG 3 cut(s) 1241, 2413, 2562
BpiI GAAGAC 2 cut(s) 1313, 1777
Bpu10I CCTNAGC 2 cut(s) 2093, 3294
Bpu14I TTCGAA 2 cut(s) 1077, 1430
BpuEI CTTGAG 1 cut(s) 3421
BpuMI CCSGG 1 cut(s) 1061
Bsa29I ATCGAT 1 cut(s) 1744
BsaAI YACGTR 2 cut(s) 2655, 2756
BsaBI GATNNNNATC 4 cut(s) 1515, 2627, 2804, 3753
BsaHI GRCGYC 1 cut(s) 3141
BsaI GGTCTC 1 cut(s) 1985
BsaJI CCNNGG 8 cut(s) 297, 601, 1068, 2470, 2527, 2542, 2587, 3347
BsaWI WCCGGW 4 cut(s) 815, 906, 1994, 2107
BsaXI ACNNNNNCTCC 2 cut(s) 2869, 2899
Bsc4I CCNNNNNNNGG 6 cut(s) 1003, 2471, 3018, 3473, 3666, 3667
Bse118I RCCGGY 2 cut(s) 1994, 2000
Bse1I ACTGG 4 cut(s) 1236, 1590, 2408, 2568
Bse21I CCTNAGG 1 cut(s) 3521
Bse3DI GCAATG 3 cut(s) 790, 1107, 3832
Bse8I GATNNNNATC 4 cut(s) 1515, 2627, 2804, 3753
BseAI TCCGGA 1 cut(s) 815
BseBI CCWGG 3 cut(s) 180, 979, 2544
BseCI ATCGAT 1 cut(s) 1744
BseDI CCNNGG 8 cut(s) 297, 601, 1068, 2470, 2527, 2542, 2587, 3347
BseGI GGATG 9 cut(s) 615, 1331, 1452, 2010, 2763, 2767, 2949, 3008, 3508
BseJI GATNNNNATC 4 cut(s) 1515, 2627, 2804, 3753
BseLI CCNNNNNNNGG 6 cut(s) 1003, 2471, 3018, 3473, 3666, 3667
BseMI GCAATG 3 cut(s) 790, 1107, 3832
BseMII CTCAG 5 cut(s) 1450, 1766, 1980, 2084, 2786
BseNI ACTGG 4 cut(s) 1236, 1590, 2408, 2568
BseRI GAGGAG 3 cut(s) 283, 2890, 2962
BseXI GCAGC 5 cut(s) 73, 82, 593, 1511, 2109
BsgI GTGCAG 3 cut(s) 182, 2405, 2496
Bsh1236I CGCG 3 cut(s) 1011, 1347, 1959
Bsh1285I CGRYCG 2 cut(s) 1802, 1957
BshFI GGCC 5 cut(s) 2464, 2923, 3036, 3325, 3518
BshNI GGYRCC 1 cut(s) 1997
BshTI ACCGGT 1 cut(s) 1994
BshVI ATCGAT 1 cut(s) 1744
BsiEI CGRYCG 2 cut(s) 1802, 1957
BsiHKAI GWGCWC 2 cut(s) 371, 1651
BsiHKCI CYCGRG 1 cut(s) 1336
BsiSI CCGG 6 cut(s) 816, 907, 1060, 1995, 2001, 2108
BslFI GGGAC 3 cut(s) 967, 1364, 1902
BslI CCNNNNNNNGG 6 cut(s) 1003, 2471, 3018, 3473, 3666, 3667
BsmAI GTCTC 6 cut(s) 758, 1183, 1799, 1811, 1985, 3333
BsmBI CGTCTC 3 cut(s) 1799, 1811, 3333
BsmFI GGGAC 3 cut(s) 967, 1364, 1902
BsmI GAATGC 2 cut(s) 3118, 3553
BsnI GGCC 5 cut(s) 2464, 2923, 3036, 3325, 3518
Bso31I GGTCTC 1 cut(s) 1985
BsoBI CYCGRG 1 cut(s) 1336
Bsp119I TTCGAA 2 cut(s) 1077, 1430
Bsp1286I GDGCHC 2 cut(s) 371, 1651
Bsp13I TCCGGA 1 cut(s) 815
Bsp19I CCATGG 3 cut(s) 1068, 2527, 3347
BspACI CCGC 9 cut(s) 361, 750, 985, 1543, 1758, 1798, 1902, 1959, 2136
BspANI GGCC 5 cut(s) 2464, 2923, 3036, 3325, 3518
BspCNI CTCAG 5 cut(s) 1449, 1767, 1981, 2085, 2785
BspDI ATCGAT 1 cut(s) 1744
BspEI TCCGGA 1 cut(s) 815
BspFNI CGCG 3 cut(s) 1011, 1347, 1959
BspLI GGNNCC 8 cut(s) 559, 747, 814, 983, 1843, 1999, 2121, 3832
BspPI GGATC 8 cut(s) 740, 753, 1293, 1524, 1836, 1849, 2317, 3458
BspQI GCTCTTC 3 cut(s) 1136, 1218, 3392
BspT104I TTCGAA 2 cut(s) 1077, 1430
BspT107I GGYRCC 1 cut(s) 1997
BspTI CTTAAG 1 cut(s) 1028
BspTNI GGTCTC 1 cut(s) 1985
BsrBI CCGCTC 1 cut(s) 752
BsrDI GCAATG 3 cut(s) 790, 1107, 3832
BsrFI RCCGGY 2 cut(s) 1994, 2000
BsrI ACTGG 4 cut(s) 1236, 1590, 2408, 2568
BssAI RCCGGY 2 cut(s) 1994, 2000
BssECI CCNNGG 8 cut(s) 297, 601, 1068, 2470, 2527, 2542, 2587, 3347
BssNI GRCGYC 1 cut(s) 3141
BssSI CACGAG 1 cut(s) 664
BssT1I CCWWGG 7 cut(s) 297, 601, 1068, 2470, 2527, 2587, 3347
Bst2BI CACGAG 1 cut(s) 664
Bst2UI CCWGG 3 cut(s) 180, 979, 2544
Bst4CI ACNGT 7 cut(s) 207, 968, 1241, 1463, 1951, 2047, 3043
Bst6I CTCTTC 6 cut(s) 642, 1136, 1218, 2207, 2933, 3392
BstACI GRCGYC 1 cut(s) 3141
BstAFI CTTAAG 1 cut(s) 1028
BstAPI GCANNNNNTGC 1 cut(s) 1118
BstBAI YACGTR 2 cut(s) 2655, 2756
BstBI TTCGAA 2 cut(s) 1077, 1430
BstDSI CCRYGG 3 cut(s) 1068, 2527, 3347
BstEII GGTNACC 2 cut(s) 1063, 1753
BstF5I GGATG 9 cut(s) 615, 1331, 1452, 2010, 2763, 2767, 2949, 3008, 3508
BstFNI CGCG 3 cut(s) 1011, 1347, 1959
BstH2I RGCGCY 1 cut(s) 1525
BstHHI GCGC 2 cut(s) 1524, 1548
BstMAI GTCTC 6 cut(s) 758, 1183, 1799, 1811, 1985, 3333
BstMCI CGRYCG 2 cut(s) 1802, 1957
BstNI CCWGG 3 cut(s) 180, 979, 2544
BstNSI RCATGY 7 cut(s) 75, 115, 836, 1086, 1203, 1552, 3688
BstPI GGTNACC 2 cut(s) 1063, 1753
BstSCI CCNGG 4 cut(s) 178, 977, 1059, 2542
BstSFI CTRYAG 2 cut(s) 964, 3030
BstUI CGCG 3 cut(s) 1011, 1347, 1959
BstV1I GCAGC 5 cut(s) 73, 82, 593, 1511, 2109
BstV2I GAAGAC 2 cut(s) 1313, 1777
BstX2I RGATCY 7 cut(s) 745, 1418, 1841, 2309, 2799, 3026, 3463
BstXI CCANNNNNNTGG 1 cut(s) 304
BstYI RGATCY 7 cut(s) 745, 1418, 1841, 2309, 2799, 3026, 3463
Bsu15I ATCGAT 1 cut(s) 1744
Bsu36I CCTNAGG 1 cut(s) 3521
BsuI GTATCC 1 cut(s) 3249
BsuRI GGCC 5 cut(s) 2464, 2923, 3036, 3325, 3518
BsuTUI ATCGAT 1 cut(s) 1744
BtgI CCRYGG 3 cut(s) 1068, 2527, 3347
BtrI CACGTC 1 cut(s) 975
BtsCI GGATG 9 cut(s) 615, 1331, 1452, 2010, 2763, 2767, 2949, 3008, 3508
BtsI GCAGTG 1 cut(s) 1119
BtsIMutI CAGTG 5 cut(s) 1119, 1159, 1468, 1720, 2575
CfoI GCGC 2 cut(s) 1524, 1548
Cfr10I RCCGGY 2 cut(s) 1994, 2000
Cfr13I GGNCC 7 cut(s) 338, 558, 981, 2317, 2922, 3035, 3517
ClaI ATCGAT 1 cut(s) 1744
CseI GACGC 4 cut(s) 1336, 1816, 2183, 2631
Csp6I GTAC 7 cut(s) 496, 645, 1500, 1702, 3569, 3646, 3675
CspAI ACCGGT 1 cut(s) 1994
CviQI GTAC 7 cut(s) 496, 645, 1500, 1702, 3569, 3646, 3675
DraIII CACNNNGTG 2 cut(s) 625, 2570
DrdI GACNNNNNNGTC 1 cut(s) 1949
DriI GACNNNNNGTC 1 cut(s) 1953
DseDI GACNNNNNNGTC 1 cut(s) 1949
Eam1104I CTCTTC 6 cut(s) 642, 1136, 1218, 2207, 2933, 3392
Eam1105I GACNNNNNGTC 1 cut(s) 1953
EarI CTCTTC 6 cut(s) 642, 1136, 1218, 2207, 2933, 3392
Eco130I CCWWGG 7 cut(s) 297, 601, 1068, 2470, 2527, 2587, 3347
Eco31I GGTCTC 1 cut(s) 1985
Eco32I GATATC 2 cut(s) 676, 1711
Eco47I GGWCC 4 cut(s) 338, 558, 981, 2317
Eco57I CTGAAG 1 cut(s) 1307
Eco72I CACGTG 2 cut(s) 2655, 2756
Eco81I CCTNAGG 1 cut(s) 3521
Eco88I CYCGRG 1 cut(s) 1336
Eco91I GGTNACC 2 cut(s) 1063, 1753
EcoO109I RGGNCCY 3 cut(s) 558, 981, 3517
EcoO65I GGTNACC 2 cut(s) 1063, 1753
EcoRII CCWGG 3 cut(s) 178, 977, 2542
EcoRV GATATC 2 cut(s) 676, 1711
EcoT14I CCWWGG 7 cut(s) 297, 601, 1068, 2470, 2527, 2587, 3347
EcoT22I ATGCAT 2 cut(s) 2164, 2497
ErhI CCWWGG 7 cut(s) 297, 601, 1068, 2470, 2527, 2587, 3347
Esp3I CGTCTC 3 cut(s) 1799, 1811, 3333
FalI AAGNNNNNCTT 4 cut(s) 1582, 1614, 3374, 3406
FaqI GGGAC 3 cut(s) 967, 1364, 1902
FauI CCCGC 4 cut(s) 354, 757, 992, 1895
FauNDI CATATG 3 cut(s) 808, 1479, 2647
FbaI TGATCA 1 cut(s) 3748
Fnu4HI GCNGC 7 cut(s) 87, 96, 607, 1525, 1544, 1960, 2098
FokI GGATG 9 cut(s) 602, 1318, 1439, 1997, 2750, 2754, 2956, 2995, 3495
Fsp4HI GCNGC 7 cut(s) 87, 96, 607, 1525, 1544, 1960, 2098
GlaI GCGC 2 cut(s) 1523, 1547
GluI GCNGC 7 cut(s) 87, 96, 607, 1525, 1544, 1960, 2098
HaeII RGCGCY 1 cut(s) 1525
HaeIII GGCC 5 cut(s) 2464, 2923, 3036, 3325, 3518
HapII CCGG 6 cut(s) 816, 907, 1060, 1995, 2001, 2108
HgaI GACGC 4 cut(s) 1336, 1816, 2183, 2631
HhaI GCGC 2 cut(s) 1524, 1548
Hin1I GRCGYC 1 cut(s) 3141
Hin6I GCGC 2 cut(s) 1522, 1546
HinP1I GCGC 2 cut(s) 1522, 1546
HincII GTYRAC 1 cut(s) 3618
HindII GTYRAC 1 cut(s) 3618
HindIII AAGCTT 1 cut(s) 3554
HpaII CCGG 6 cut(s) 816, 907, 1060, 1995, 2001, 2108
HphI GGTGA 8 cut(s) 765, 1247, 1747, 2478, 2556, 2828, 3293, 3649
Hpy166II GTNNAC 5 cut(s) 1229, 2317, 2573, 3618, 3648
Hpy8I GTNNAC 5 cut(s) 1229, 2317, 2573, 3618, 3648
Hpy99I CGWCG 4 cut(s) 557, 1955, 1967, 3146
HpyCH4III ACNGT 7 cut(s) 207, 968, 1241, 1463, 1951, 2047, 3043
HpyCH4IV ACGT 4 cut(s) 974, 2654, 2755, 3141
HpySE526I ACGT 4 cut(s) 974, 2654, 2755, 3141
Hsp92I GRCGYC 1 cut(s) 3141
HspAI GCGC 2 cut(s) 1522, 1546
Kpn2I TCCGGA 1 cut(s) 815
KroI GCCGGC 1 cut(s) 2000
KroNI GCCGGC 1 cut(s) 2002
Ksp22I TGATCA 1 cut(s) 3748
LguI GCTCTTC 3 cut(s) 1136, 1218, 3392
Lsp1109I GCAGC 5 cut(s) 73, 82, 593, 1511, 2109
LweI GCATC 5 cut(s) 996, 1045, 2147, 2171, 2399
MaeII ACGT 4 cut(s) 974, 2654, 2755, 3141
MbiI CCGCTC 1 cut(s) 752
MfeI CAATTG 1 cut(s) 2576
MflI RGATCY 7 cut(s) 745, 1418, 1841, 2309, 2799, 3026, 3463
MhlI GDGCHC 2 cut(s) 371, 1651
MlyI GAGTC 4 cut(s) 411, 3635, 3639, 3712
MmeI TCCRAC 4 cut(s) 1782, 1819, 3464, 3491
Mph1103I ATGCAT 2 cut(s) 2164, 2497
MroI TCCGGA 1 cut(s) 815
MroNI GCCGGC 1 cut(s) 2000
MroXI GAANNNNTTC 2 cut(s) 1130, 2537
MslI CAYNNNNRTG 9 cut(s) 70, 72, 463, 1112, 1461, 1482, 2261, 3352, 3717
MspCI CTTAAG 1 cut(s) 1028
MspI CCGG 6 cut(s) 816, 907, 1060, 1995, 2001, 2108
MspR9I CCNGG 4 cut(s) 180, 979, 1061, 2544
MunI CAATTG 1 cut(s) 2576
Mva1269I GAATGC 2 cut(s) 3118, 3553
MvaI CCWGG 3 cut(s) 180, 979, 2544
MvnI CGCG 3 cut(s) 1011, 1347, 1959
NaeI GCCGGC 1 cut(s) 2002
NciI CCSGG 1 cut(s) 1061
NcoI CCATGG 3 cut(s) 1068, 2527, 3347
NdeI CATATG 3 cut(s) 808, 1479, 2647
NgoMIV GCCGGC 1 cut(s) 2000
NlaIV GGNNCC 8 cut(s) 559, 747, 814, 983, 1843, 1999, 2121, 3832
NmuCI GTSAC 6 cut(s) 182, 1235, 1753, 1905, 2254, 3638
NsiI ATGCAT 2 cut(s) 2164, 2497
NspI RCATGY 7 cut(s) 75, 115, 836, 1086, 1203, 1552, 3688
NspV TTCGAA 2 cut(s) 1077, 1430
OliI CACNNNNGTG 1 cut(s) 72
PaeI GCATGC 1 cut(s) 3688
PaeR7I CTCGAG 1 cut(s) 1336
PciI ACATGT 2 cut(s) 832, 1082
PciSI GCTCTTC 3 cut(s) 1136, 1218, 3392
PcsI WCGNNNNNNNCGW 3 cut(s) 75, 1947, 1959
PctI GAATGC 2 cut(s) 3118, 3553
PdiI GCCGGC 1 cut(s) 2002
PdmI GAANNNNTTC 2 cut(s) 1130, 2537
PfeI GAWTC 8 cut(s) 422, 819, 1432, 1741, 1928, 2673, 3491, 3499
PflFI GACNNNGTC 1 cut(s) 2057
PflMI CCANNNNNTGG 1 cut(s) 3018
PinAI ACCGGT 1 cut(s) 1994
PkrI GCNGC 7 cut(s) 88, 97, 608, 1526, 1545, 1961, 2099
PleI GAGTC 4 cut(s) 411, 3635, 3638, 3711
PmaCI CACGTG 2 cut(s) 2655, 2756
PmlI CACGTG 2 cut(s) 2655, 2756
PpsI GAGTC 4 cut(s) 411, 3635, 3638, 3711
Ppu21I YACGTR 2 cut(s) 2655, 2756
PpuMI RGGWCCY 2 cut(s) 558, 981
PscI ACATGT 2 cut(s) 832, 1082
PsiI TTATAA 2 cut(s) 705, 1425
Psp5II RGGWCCY 2 cut(s) 558, 981
Psp6I CCWGG 3 cut(s) 178, 977, 2542
PspCI CACGTG 2 cut(s) 2655, 2756
PspEI GGTNACC 2 cut(s) 1063, 1753
PspGI CCWGG 3 cut(s) 178, 977, 2542
PspN4I GGNNCC 8 cut(s) 559, 747, 814, 983, 1843, 1999, 2121, 3832
PspPI GGNCC 7 cut(s) 338, 558, 981, 2317, 2922, 3035, 3517
PspPPI RGGWCCY 2 cut(s) 558, 981
PspXI VCTCGAGB 1 cut(s) 1336
PsrI GAACNNNNNNTAC 2 cut(s) 2057, 2089
PsuI RGATCY 7 cut(s) 745, 1418, 1841, 2309, 2799, 3026, 3463
PsyI GACNNNGTC 1 cut(s) 2057
RsaI GTAC 7 cut(s) 497, 646, 1501, 1703, 3570, 3647, 3676
RsaNI GTAC 7 cut(s) 496, 645, 1500, 1702, 3569, 3646, 3675
RseI CAYNNNNRTG 9 cut(s) 70, 72, 463, 1112, 1461, 1482, 2261, 3352, 3717
SapI GCTCTTC 3 cut(s) 1136, 1218, 3392
SatI GCNGC 7 cut(s) 87, 96, 607, 1525, 1544, 1960, 2098
Sau96I GGNCC 7 cut(s) 338, 558, 981, 2317, 2922, 3035, 3517
ScaI AGTACT 1 cut(s) 497
SchI GAGTC 4 cut(s) 411, 3635, 3639, 3712
ScrFI CCNGG 4 cut(s) 180, 979, 1061, 2544
SduI GDGCHC 2 cut(s) 371, 1651
SfaNI GCATC 5 cut(s) 996, 1045, 2147, 2171, 2399
SfcI CTRYAG 2 cut(s) 964, 3030
Sfr274I CTCGAG 1 cut(s) 1336
SfuI TTCGAA 2 cut(s) 1077, 1430
SinI GGWCC 4 cut(s) 338, 558, 981, 2317
SlaI CTCGAG 1 cut(s) 1336
SmiMI CAYNNNNRTG 9 cut(s) 70, 72, 463, 1112, 1461, 1482, 2261, 3352, 3717
SmlI CTYRAG 3 cut(s) 1028, 1336, 3436
SmoI CTYRAG 3 cut(s) 1028, 1336, 3436
SphI GCATGC 1 cut(s) 3688
SsiI CCGC 9 cut(s) 361, 750, 985, 1543, 1758, 1798, 1902, 1959, 2136
SspI AATATT 1 cut(s) 535
StyD4I CCNGG 4 cut(s) 178, 977, 1059, 2542
StyI CCWWGG 7 cut(s) 297, 601, 1068, 2470, 2527, 2587, 3347
TaaI ACNGT 7 cut(s) 207, 968, 1241, 1463, 1951, 2047, 3043
TaiI ACGT 4 cut(s) 977, 2657, 2758, 3144
TaqII GACCGA 3 cut(s) 1879, 1943, 3474
TatI WGTACW 3 cut(s) 495, 1701, 3674
TauI GCSGC 2 cut(s) 1546, 1962
TfiI GAWTC 8 cut(s) 422, 819, 1432, 1741, 1928, 2673, 3491, 3499
TscAI CASTG 5 cut(s) 1119, 1159, 1468, 1720, 2575
TseFI GTSAC 6 cut(s) 182, 1235, 1753, 1905, 2254, 3638
TseI GCWGC 5 cut(s) 86, 95, 606, 1524, 2097
Tsp45I GTSAC 6 cut(s) 182, 1235, 1753, 1905, 2254, 3638
TspGWI ACGGA 2 cut(s) 1136, 3097
TspRI CASTG 5 cut(s) 1119, 1159, 1468, 1720, 2575
Tth111I GACNNNGTC 1 cut(s) 2057
Van91I CCANNNNNTGG 1 cut(s) 3018
Vha464I CTTAAG 1 cut(s) 1028
VpaK11BI GGWCC 4 cut(s) 338, 558, 981, 2317
XapI RAATTY 5 cut(s) 479, 505, 1848, 2598, 3169
XbaI TCTAGA 2 cut(s) 670, 2035
XceI RCATGY 7 cut(s) 75, 115, 836, 1086, 1203, 1552, 3688
XcmI CCANNNNNNNNNTGG 1 cut(s) 2327
XhoI CTCGAG 1 cut(s) 1336
XmaJI CCTAGG 1 cut(s) 601
XmnI GAANNNNTTC 2 cut(s) 1130, 2537
ZraI GACGTC 1 cut(s) 3142
ZrmI AGTACT 1 cut(s) 497
Zsp2I ATGCAT 2 cut(s) 2164, 2497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.