Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

11008425 .. 11009596

Gene Structure 1172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 801 bp

ATGATCAAATTCAACAATAAGAAGAAAAAAAATTTAATGATTTCATGTGTTTCATATTCTTTCATAGTGTTCCACGATTTTAATTGTGTCAGTTTAGTAATTTTTCAATATTTATCAGAATCTAAATATTTTTATATTAAAATGTTCATAAAATTAAATTATGATAGTTTATATAATTATTTTTTTTTAAACCAAAAAAGTTGGAGCAAAAAAACTATTTATAAGTTAAAAATTTTAGATTTTAACTCAAGAGTAGGAGATGTAAATATTCGAGAATACCAAACAAAATTGGGTGTGTTAATTTTTTTTTTAATATTATTAATATCCATTCTACTGCAGATTGCCACCTGGTTTCTTTACAGGCTTGTGTGCAATGCTAGCTTTACTATCTCAAATATAGTTGGCCCGCAAGAAGAACTTGCACTTGGAGGCAACCCTGTAACTTACCTAAGAATTAATGCATCCAGCCTGCCCCAGGTATGTGTGTGTGTGTGTGCGCTTGTAATGCACTTGGTGAGCTATGTTGAAAGAGCAGACTTGCAAATTTTGGTGACCAAAGATATCATCCCTGACCCTGCATTTCTCCAGCTGCAGCCATCGGTAGAACCTAACAAGCACGACGTAACGTCTCTACGTTTAATGGAATGGATACAGCTTTACATCCCGTTAGCATGGACAAATTTTTCTATATTAACGTTTATTTGTGAACGTTTCCACTGGAAAACGCGGATTAATTGGTCGGTGGGTTTGAACCAGTCAGTGGCTAATCTAACATTTAATCTAACACAATCCATCGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009987 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0047196 GO:0071704 GO:0071944 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1298 WES_acyltransf

Protein Analysis

267

Amino Acids

31.04

Weight (kDa)

9.17

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WS_DGAT_C	PF06974	112 - 195	2.8e-15	WS/DGAT C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	222
AccB7I	CCANNNNNTGG	1 cut(s)	760
AccII	CGCG	1 cut(s)	727
AciI	CCGC	2 cut(s)	407, 727
AclI	AACGTT	2 cut(s)	695, 709
AcsI	RAATTY	5 cut(s)	8, 31, 231, 543, 679
AdeI	CACNNNGTG	1 cut(s)	514
AfiI	CCNNNNNNNGG	2 cut(s)	475, 760
AgsI	TTSAA	4 cut(s)	13, 107, 527, 751
AhdI	GACNNNNNGTC	1 cut(s)	625
AjnI	CCWGG	2 cut(s)	347, 474
AjuI	GAANNNNNNNTTGG	2 cut(s)	408, 440
AluBI	AGCT	4 cut(s)	381, 519, 589, 655
AluI	AGCT	4 cut(s)	381, 519, 589, 655
Alw26I	GTCTC	1 cut(s)	633
AoxI	GGCC	1 cut(s)	403
ApeKI	GCWGC	2 cut(s)	589, 592
ApoI	RAATTY	5 cut(s)	8, 31, 231, 543, 679
AseI	ATTAAT	3 cut(s)	320, 456, 732
AspLEI	GCGC	1 cut(s)	499
AspS9I	GGNCC	1 cut(s)	404
AsuHPI	GGTGA	2 cut(s)	526, 562
AsuNHI	GCTAGC	1 cut(s)	377
BbvI	GCAGC	2 cut(s)	576, 604
BccI	CCATC	2 cut(s)	604, 800
BciT130I	CCWGG	2 cut(s)	349, 476
BciVI	GTATCC	1 cut(s)	642
BclI	TGATCA	1 cut(s)	3
BcoDI	GTCTC	1 cut(s)	633
BfaI	CTAG	1 cut(s)	378
BfmI	CTRYAG	2 cut(s)	335, 590
BfuI	GTATCC	1 cut(s)	642
BisI	GCNGC	2 cut(s)	590, 593
BlsI	GCNGC	2 cut(s)	591, 594
Bme1390I	CCNGG	2 cut(s)	349, 476
BmeRI	GACNNNNNGTC	1 cut(s)	625
BmgT120I	GGNCC	1 cut(s)	404
BmrFI	CCNGG	2 cut(s)	349, 476
BmsI	GCATC	1 cut(s)	470
BmtI	GCTAGC	1 cut(s)	381
BpmI	CTGGAG	1 cut(s)	569
BpuEI	CTTGAG	1 cut(s)	232
BsaJI	CCNNGG	1 cut(s)	474
Bsc4I	CCNNNNNNNGG	2 cut(s)	475, 760
Bse1I	ACTGG	2 cut(s)	722, 754
Bse3DI	GCAATG	1 cut(s)	379
BseBI	CCWGG	2 cut(s)	349, 476
BseDI	CCNNGG	1 cut(s)	474
BseGI	GGATG	3 cut(s)	461, 564, 660
BseLI	CCNNNNNNNGG	2 cut(s)	475, 760
BseMI	GCAATG	1 cut(s)	379
BseNI	ACTGG	2 cut(s)	722, 754
BseXI	GCAGC	2 cut(s)	576, 604
Bsh1236I	CGCG	1 cut(s)	727
BshFI	GGCC	1 cut(s)	405
BslI	CCNNNNNNNGG	2 cut(s)	475, 760
BsmAI	GTCTC	1 cut(s)	633
BsmBI	CGTCTC	1 cut(s)	633
BsnI	GGCC	1 cut(s)	405
Bsp143I	GATC	1 cut(s)	3
BspACI	CCGC	2 cut(s)	407, 727
BspANI	GGCC	1 cut(s)	405
BspFNI	CGCG	1 cut(s)	727
BspMAI	CTGCAG	2 cut(s)	339, 594
BspOI	GCTAGC	1 cut(s)	381
BsrDI	GCAATG	1 cut(s)	379
BsrI	ACTGG	2 cut(s)	722, 754
BssECI	CCNNGG	1 cut(s)	474
BssMI	GATC	1 cut(s)	3
Bst2UI	CCWGG	2 cut(s)	349, 476
BstC8I	GCNNGC	3 cut(s)	379, 407, 470
BstDEI	CTNAG	1 cut(s)	449
BstEII	GGTNACC	1 cut(s)	550
BstENI	CCTNNNNNAGG	1 cut(s)	473
BstF5I	GGATG	3 cut(s)	461, 564, 660
BstFNI	CGCG	1 cut(s)	727
BstHHI	GCGC	1 cut(s)	499
BstKTI	GATC	1 cut(s)	6
BstMAI	GTCTC	1 cut(s)	633
BstMBI	GATC	1 cut(s)	3
BstMWI	GCNNNNNNNGC	2 cut(s)	378, 505
BstNI	CCWGG	2 cut(s)	349, 476
BstPI	GGTNACC	1 cut(s)	550
BstSCI	CCNGG	2 cut(s)	347, 474
BstSFI	CTRYAG	2 cut(s)	335, 590
BstUI	CGCG	1 cut(s)	727
BstV1I	GCAGC	2 cut(s)	576, 604
BsuI	GTATCC	1 cut(s)	642
BsuRI	GGCC	1 cut(s)	405
BtsCI	GGATG	3 cut(s)	461, 564, 660
BtsIMutI	CAGTG	2 cut(s)	715, 765
Cac8I	GCNNGC	3 cut(s)	379, 407, 470
CfoI	GCGC	1 cut(s)	499
Cfr13I	GGNCC	1 cut(s)	404
CsiI	ACCWGGT	1 cut(s)	347
CviAII	CATG	2 cut(s)	45, 672
CviJI	RGCY	9 cut(s)	364, 381, 405, 468, 519, 589, 595, 655, 764
CviKI_1	RGCY	9 cut(s)	364, 381, 405, 468, 519, 589, 595, 655, 764
DdeI	CTNAG	1 cut(s)	449
DpnI	GATC	1 cut(s)	5
DpnII	GATC	1 cut(s)	3
DraI	TTTAAA	1 cut(s)	189
DraIII	CACNNNGTG	1 cut(s)	514
DriI	GACNNNNNGTC	1 cut(s)	625
Eam1105I	GACNNNNNGTC	1 cut(s)	625
Eco32I	GATATC	1 cut(s)	562
Eco91I	GGTNACC	1 cut(s)	550
EcoNI	CCTNNNNNAGG	1 cut(s)	473
EcoO65I	GGTNACC	1 cut(s)	550
EcoRII	CCWGG	2 cut(s)	347, 474
EcoRV	GATATC	1 cut(s)	562
EcoT22I	ATGCAT	1 cut(s)	463
Esp3I	CGTCTC	1 cut(s)	633
FaeI	CATG	2 cut(s)	48, 675
FalI	AAGNNNNNCTT	2 cut(s)	402, 434
FatI	CATG	2 cut(s)	44, 671
FauI	CCCGC	1 cut(s)	414
FbaI	TGATCA	1 cut(s)	3
Fnu4HI	GCNGC	2 cut(s)	590, 593
FokI	GGATG	3 cut(s)	448, 551, 647
Fsp4HI	GCNGC	2 cut(s)	590, 593
FspBI	CTAG	1 cut(s)	378
GlaI	GCGC	1 cut(s)	498
GluI	GCNGC	2 cut(s)	590, 593
GsuI	CTGGAG	1 cut(s)	569
HaeIII	GGCC	1 cut(s)	405
HhaI	GCGC	1 cut(s)	499
Hin1II	CATG	2 cut(s)	48, 675
Hin6I	GCGC	1 cut(s)	497
HinP1I	GCGC	1 cut(s)	497
HinfI	GANTC	1 cut(s)	119
HphI	GGTGA	2 cut(s)	526, 562
Hpy166II	GTNNAC	1 cut(s)	707
Hpy188I	TCNGA	1 cut(s)	118
Hpy188III	TCNNGA	2 cut(s)	249, 272
Hpy8I	GTNNAC	1 cut(s)	707
Hpy99I	CGWCG	1 cut(s)	623
HpyCH4IV	ACGT	5 cut(s)	621, 626, 634, 695, 709
HpyCH4V	TGCA	8 cut(s)	337, 372, 422, 461, 508, 541, 578, 592
HpyF10VI	GCNNNNNNNGC	2 cut(s)	378, 505
HpyF3I	CTNAG	1 cut(s)	449
HpySE526I	ACGT	5 cut(s)	621, 626, 634, 695, 709
Hsp92II	CATG	2 cut(s)	48, 675
HspAI	GCGC	1 cut(s)	497
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	1 cut(s)	3
LmnI	GCTCC	1 cut(s)	204
Lsp1109I	GCAGC	2 cut(s)	576, 604
LweI	GCATC	1 cut(s)	470
MabI	ACCWGGT	1 cut(s)	347
MaeI	CTAG	1 cut(s)	378
MaeII	ACGT	5 cut(s)	621, 626, 634, 695, 709
MaeIII	GTNAC	3 cut(s)	439, 550, 622
MalI	GATC	1 cut(s)	5
MboI	GATC	1 cut(s)	3
MboII	GAAGA	2 cut(s)	34, 425
MmeI	TCCRAC	1 cut(s)	182
MnlI	CCTC	1 cut(s)	422
Mph1103I	ATGCAT	1 cut(s)	463
MspA1I	CMGCKG	1 cut(s)	589
MspR9I	CCNGG	2 cut(s)	349, 476
MvaI	CCWGG	2 cut(s)	349, 476
MvnI	CGCG	1 cut(s)	727
MwoI	GCNNNNNNNGC	2 cut(s)	378, 505
NdeII	GATC	1 cut(s)	3
NheI	GCTAGC	1 cut(s)	377
NlaIII	CATG	2 cut(s)	48, 675
NmuCI	GTSAC	1 cut(s)	550
NsiI	ATGCAT	1 cut(s)	463
PfeI	GAWTC	1 cut(s)	119
PflMI	CCANNNNNTGG	1 cut(s)	760
PkrI	GCNGC	2 cut(s)	591, 594
PshBI	ATTAAT	3 cut(s)	320, 456, 732
PsiI	TTATAA	1 cut(s)	222
Psp1406I	AACGTT	2 cut(s)	695, 709
Psp6I	CCWGG	2 cut(s)	347, 474
PspEI	GGTNACC	1 cut(s)	550
PspGI	CCWGG	2 cut(s)	347, 474
PspPI	GGNCC	1 cut(s)	404
PstI	CTGCAG	2 cut(s)	339, 594
PvuII	CAGCTG	1 cut(s)	589
SatI	GCNGC	2 cut(s)	590, 593
Sau3AI	GATC	1 cut(s)	3
Sau96I	GGNCC	1 cut(s)	404
ScrFI	CCNGG	2 cut(s)	349, 476
SexAI	ACCWGGT	1 cut(s)	347
SfaNI	GCATC	1 cut(s)	470
SfcI	CTRYAG	2 cut(s)	335, 590
SmlI	CTYRAG	1 cut(s)	247
SmoI	CTYRAG	1 cut(s)	247
SsiI	CCGC	2 cut(s)	407, 727
SspI	AATATT	4 cut(s)	110, 128, 268, 315
SspMI	CTAG	1 cut(s)	378
StyD4I	CCNGG	2 cut(s)	347, 474
TaiI	ACGT	5 cut(s)	624, 629, 637, 698, 712
TaqI	TCGA	1 cut(s)	271
TfiI	GAWTC	1 cut(s)	119
TscAI	CASTG	2 cut(s)	722, 765
TseFI	GTSAC	1 cut(s)	550
TseI	GCWGC	2 cut(s)	589, 592
Tsp45I	GTSAC	1 cut(s)	550
TspDTI	ATGAA	4 cut(s)	33, 42, 52, 136
TspRI	CASTG	2 cut(s)	722, 765
Van91I	CCANNNNNTGG	1 cut(s)	760
VspI	ATTAAT	3 cut(s)	320, 456, 732
XagI	CCTNNNNNAGG	1 cut(s)	473
XapI	RAATTY	5 cut(s)	8, 31, 231, 543, 679
XspI	CTAG	1 cut(s)	378
Zsp2I	ATGCAT	1 cut(s)	463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.