pycom05g08550

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
11139029 .. 11140555
1527 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1032 bp
ATGAAATACTGGCTGACGTATACAATTGAGGGAGACAAACTTTTCTCCTTCTTTTTCGCATATCACAAACAACGCCACCGTCACCGCAGCCCTATTGAAATCCCAATAATCATGGGTAGCGAAAACCGTGACTTCCACATCTATTTCTTCCCTTACATGGCTCATGGCCACTTGATACCGATCTCCGACATGGCCCCAACATTCTCCAAAGCCACCCAATCAAGTAAAACCAACTCCGATGGCATCGAAGTCAAAATCAAAACCATCAAGTTCCCTTCTTTAGAAGTTGGTCTGCTAGAAGGGTGTGAGAACCTCGACTCACTCCCCTCACTAGAATTAAGCACCAATTTTCTCAAAGCAATAAGCTTCTCCAAGAGCCGCTCGAGCAACTTCTGTTCGAAGAAAGTGTATTTGCAGCAATTTGATCTCAGAGAAGAAAAAATTGAGGGAAGAATGAGAGATAAAGAGAGAAATTTCATGACCGTTAGAAGGGAAGATAATCTAGGAGAGCCTATGTGCTCATCCAACCATTCATTACAAGACCCTATGAGATCTTGCCACTTGCTCACATTTGAGCCTAATCTTGCTAAAATGAAAGAAATCACATACTCCAAGCTTTTGCTCCTCACTTTTGTAGAATTGCTGATCAATTGTTCCTTCGTGGATTGCATCCATGATGAAATGAAACTTCTTCTTGATGTTGCAGATGTGTTGTCACACGTCAAAAGGGTTGGTTTAATCTGTTCTTCACCAAAATCATGCAGCACAAATCTCAACTATATGGCTCGAGTAGTAACTTCCGAAGCACTCATATACTCGGCCTCTACATTTGAGAGTGCAACACTTTCTAAAAACATAGCCAGAAGTAGATTTCATGTCATCTTCATCCCCACTCTAGTCACTATCACAGAAACCTATGAGCAAGGCTACATCTCCCTTCTTATACTTGATGAATCTAACCAAAACAAACATCAAAAGGAATTATTAAATTATGAATTCATAAGTAAACCTAAAATTAAAATAAATAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

344

Amino Acids

39.59

Weight (kDa)

8.49

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 381
AccI GTMKAC 1 cut(s) 20
AciI CCGC 2 cut(s) 85, 379
AcoI YGGCCR 1 cut(s) 166
AcsI RAATTY 2 cut(s) 472, 995
AfiI CCNNNNNNNGG 2 cut(s) 157, 489
AflIII ACRYGT 1 cut(s) 718
AgsI TTSAA 1 cut(s) 98
AjiI CACGTC 1 cut(s) 721
AluBI AGCT 2 cut(s) 366, 616
AluI AGCT 2 cut(s) 366, 616
Alw21I GWGCWC 1 cut(s) 521
Alw26I GTCTC 1 cut(s) 27
Ama87I CYCGRG 2 cut(s) 382, 786
AoxI GGCC 3 cut(s) 166, 192, 819
ApeKI GCWGC 3 cut(s) 87, 415, 762
ApoI RAATTY 2 cut(s) 472, 995
AspS9I GGNCC 1 cut(s) 193
AsuHPI GGTGA 2 cut(s) 74, 741
AsuII TTCGAA 1 cut(s) 398
AvaI CYCGRG 2 cut(s) 382, 786
BalI TGGCCA 1 cut(s) 168
Bbv12I GWGCWC 1 cut(s) 521
BbvI GCAGC 3 cut(s) 99, 427, 774
BccI CCATC 2 cut(s) 233, 272
BclI TGATCA 1 cut(s) 645
BcoDI GTCTC 1 cut(s) 27
BfaI CTAG 4 cut(s) 296, 332, 503, 896
BglII AGATCT 1 cut(s) 551
BisI GCNGC 4 cut(s) 88, 379, 416, 763
BlsI GCNGC 4 cut(s) 89, 380, 417, 764
BmeT110I CYCGRG 2 cut(s) 382, 786
BmgBI CACGTC 1 cut(s) 721
BmgT120I GGNCC 1 cut(s) 193
BmiI GGNNCC 1 cut(s) 195
BmsI GCATC 2 cut(s) 252, 678
Bpu14I TTCGAA 1 cut(s) 398
BsaBI GATNNNNATC 1 cut(s) 179
Bsc4I CCNNNNNNNGG 2 cut(s) 157, 489
Bse1I ACTGG 1 cut(s) 14
Bse8I GATNNNNATC 1 cut(s) 179
BseGI GGATG 3 cut(s) 521, 669, 885
BseJI GATNNNNATC 1 cut(s) 179
BseLI CCNNNNNNNGG 2 cut(s) 157, 489
BseMII CTCAG 1 cut(s) 442
BseNI ACTGG 1 cut(s) 14
BseRI GAGGAG 1 cut(s) 614
BseXI GCAGC 3 cut(s) 99, 427, 774
BshFI GGCC 3 cut(s) 168, 194, 821
BsiHKAI GWGCWC 1 cut(s) 521
BsiHKCI CYCGRG 2 cut(s) 382, 786
BslI CCNNNNNNNGG 2 cut(s) 157, 489
BsmAI GTCTC 1 cut(s) 27
BsnI GGCC 3 cut(s) 168, 194, 821
BsoBI CYCGRG 2 cut(s) 382, 786
Bsp119I TTCGAA 1 cut(s) 398
Bsp1286I GDGCHC 1 cut(s) 521
Bsp143I GATC 4 cut(s) 180, 424, 551, 645
BspACI CCGC 2 cut(s) 85, 379
BspANI GGCC 3 cut(s) 168, 194, 821
BspCNI CTCAG 1 cut(s) 441
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 1 cut(s) 195
BspT104I TTCGAA 1 cut(s) 398
BsrBI CCGCTC 1 cut(s) 381
BsrI ACTGG 1 cut(s) 14
BssMI GATC 4 cut(s) 180, 424, 551, 645
BssNAI GTATAC 1 cut(s) 21
Bst1107I GTATAC 1 cut(s) 21
Bst4CI ACNGT 3 cut(s) 80, 128, 484
BstBI TTCGAA 1 cut(s) 398
BstDEI CTNAG 1 cut(s) 428
BstF5I GGATG 3 cut(s) 521, 669, 885
BstKTI GATC 4 cut(s) 183, 427, 554, 648
BstMAI GTCTC 1 cut(s) 27
BstMBI GATC 4 cut(s) 180, 424, 551, 645
BstMWI GCNNNNNNNGC 1 cut(s) 384
BstV1I GCAGC 3 cut(s) 99, 427, 774
BstX2I RGATCY 1 cut(s) 551
BstYI RGATCY 1 cut(s) 551
BstZ17I GTATAC 1 cut(s) 21
BsuRI GGCC 3 cut(s) 168, 194, 821
BtrI CACGTC 1 cut(s) 721
BtsCI GGATG 3 cut(s) 521, 669, 885
CciI TCATGA 1 cut(s) 477
Cfr13I GGNCC 1 cut(s) 193
CviAII CATG 8 cut(s) 112, 157, 164, 190, 478, 674, 759, 875
DdeI CTNAG 1 cut(s) 428
DpnI GATC 4 cut(s) 182, 426, 553, 647
DpnII GATC 4 cut(s) 180, 424, 551, 645
EaeI YGGCCR 1 cut(s) 166
Eco88I CYCGRG 2 cut(s) 382, 786
EcoRI GAATTC 1 cut(s) 995
FaeI CATG 8 cut(s) 115, 160, 167, 193, 481, 677, 762, 878
FatI CATG 8 cut(s) 111, 156, 163, 189, 477, 673, 758, 874
FbaI TGATCA 1 cut(s) 645
FblI GTMKAC 1 cut(s) 20
Fnu4HI GCNGC 4 cut(s) 88, 379, 416, 763
FokI GGATG 3 cut(s) 508, 656, 872
Fsp4HI GCNGC 4 cut(s) 88, 379, 416, 763
FspBI CTAG 4 cut(s) 296, 332, 503, 896
GluI GCNGC 4 cut(s) 88, 379, 416, 763
HaeIII GGCC 3 cut(s) 168, 194, 821
Hin1II CATG 8 cut(s) 115, 160, 167, 193, 481, 677, 762, 878
HindIII AAGCTT 2 cut(s) 364, 614
HinfI GANTC 2 cut(s) 317, 953
HphI GGTGA 2 cut(s) 74, 741
Hpy166II GTNNAC 2 cut(s) 21, 1007
Hpy188I TCNGA 4 cut(s) 187, 238, 431, 802
Hpy188III TCNNGA 2 cut(s) 478, 695
Hpy8I GTNNAC 2 cut(s) 21, 1007
HpyAV CCTTC 6 cut(s) 58, 285, 293, 483, 667, 947
HpyCH4III ACNGT 3 cut(s) 80, 128, 484
HpyCH4IV ACGT 2 cut(s) 17, 720
HpyCH4V TGCA 5 cut(s) 415, 669, 704, 762, 839
HpyF10VI GCNNNNNNNGC 1 cut(s) 384
HpyF3I CTNAG 1 cut(s) 428
HpySE526I ACGT 2 cut(s) 17, 720
Hsp92II CATG 8 cut(s) 115, 160, 167, 193, 481, 677, 762, 878
Ksp22I TGATCA 1 cut(s) 645
Kzo9I GATC 4 cut(s) 180, 424, 551, 645
LmnI GCTCC 1 cut(s) 627
LpnPI CCDG 1 cut(s) 874
Lsp1109I GCAGC 3 cut(s) 99, 427, 774
LweI GCATC 2 cut(s) 252, 678
MaeI CTAG 4 cut(s) 296, 332, 503, 896
MaeII ACGT 2 cut(s) 17, 720
MaeIII GTNAC 5 cut(s) 80, 128, 714, 793, 898
MalI GATC 4 cut(s) 182, 426, 553, 647
MbiI CCGCTC 1 cut(s) 381
MboI GATC 4 cut(s) 180, 424, 551, 645
MboII GAAGA 8 cut(s) 139, 412, 446, 462, 506, 683, 738, 874
MfeI CAATTG 2 cut(s) 24, 649
MflI RGATCY 1 cut(s) 551
MhlI GDGCHC 1 cut(s) 521
MlsI TGGCCA 1 cut(s) 168
MluNI TGGCCA 1 cut(s) 168
MlyI GAGTC 1 cut(s) 311
MmeI TCCRAC 2 cut(s) 210, 549
MnlI CCTC 6 cut(s) 22, 323, 337, 439, 635, 832
Mox20I TGGCCA 1 cut(s) 168
MscI TGGCCA 1 cut(s) 168
MseI TTAA 4 cut(s) 338, 737, 986, 1017
Msp20I TGGCCA 1 cut(s) 168
MunI CAATTG 2 cut(s) 24, 649
MwoI GCNNNNNNNGC 1 cut(s) 384
NdeII GATC 4 cut(s) 180, 424, 551, 645
NlaIII CATG 8 cut(s) 115, 160, 167, 193, 481, 677, 762, 878
NlaIV GGNNCC 1 cut(s) 195
NmeAIII GCCGAG 1 cut(s) 797
NmuCI GTSAC 4 cut(s) 80, 128, 714, 898
NspV TTCGAA 1 cut(s) 398
PaeR7I CTCGAG 2 cut(s) 382, 786
PagI TCATGA 1 cut(s) 477
PfeI GAWTC 1 cut(s) 953
PkrI GCNGC 4 cut(s) 89, 380, 417, 764
PleI GAGTC 1 cut(s) 311
PpsI GAGTC 1 cut(s) 311
PspN4I GGNNCC 1 cut(s) 195
PspPI GGNCC 1 cut(s) 193
PspXI VCTCGAGB 2 cut(s) 382, 786
PsuI RGATCY 1 cut(s) 551
SaqAI TTAA 4 cut(s) 338, 737, 986, 1017
SatI GCNGC 4 cut(s) 88, 379, 416, 763
Sau3AI GATC 4 cut(s) 180, 424, 551, 645
Sau96I GGNCC 1 cut(s) 193
SchI GAGTC 1 cut(s) 311
SduI GDGCHC 1 cut(s) 521
SetI ASST 7 cut(s) 20, 315, 368, 618, 723, 917, 1012
SfaNI GCATC 2 cut(s) 252, 678
Sfr274I CTCGAG 2 cut(s) 382, 786
SfuI TTCGAA 1 cut(s) 398
SlaI CTCGAG 2 cut(s) 382, 786
SmlI CTYRAG 2 cut(s) 382, 786
SmoI CTYRAG 2 cut(s) 382, 786
SsiI CCGC 2 cut(s) 85, 379
SspMI CTAG 4 cut(s) 296, 332, 503, 896
TaaI ACNGT 3 cut(s) 80, 128, 484
TaiI ACGT 2 cut(s) 20, 723
TaqI TCGA 5 cut(s) 246, 315, 383, 398, 787
TauI GCSGC 1 cut(s) 381
TfiI GAWTC 1 cut(s) 953
Tru1I TTAA 4 cut(s) 338, 737, 986, 1017
Tru9I TTAA 4 cut(s) 338, 737, 986, 1017
TseFI GTSAC 4 cut(s) 80, 128, 714, 898
TseI GCWGC 3 cut(s) 87, 415, 762
Tsp45I GTSAC 4 cut(s) 80, 128, 714, 898
XapI RAATTY 2 cut(s) 472, 995
XhoI CTCGAG 2 cut(s) 382, 786
XmiI GTMKAC 1 cut(s) 20
XspI CTAG 4 cut(s) 296, 332, 503, 896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.