pycom05g09880

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
13161016 .. 13161392
377 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGACGTGGCAAGACCTTCTCAGCCGTCCTCATCGTTCTTCTCCTCAACCACCTCTTCCTCTCCCCACCTCTGCTCTTGACTTCCTTTTCAACTCCTTCTCTAACATCACCAATGCTACTGACCTCACTCTCACAATGACGTCTGACTCTATGCTGCCATTCGCCTCACAAATAACACCAACTAGTTCGCTATCAGTTGGGTCTTCTAGCCAACAAAAATTCCCATAA

Protein Analysis

76

Amino Acids

8.17

Weight (kDa)

5.34

Isoelectric Point (pI)

69.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 143
AcsI RAATTY 1 cut(s) 218
AcyI GRCGYC 1 cut(s) 140
AgsI TTSAA 1 cut(s) 91
AhlI ACTAGT 1 cut(s) 182
AjiI CACGTC 1 cut(s) 6
ApeKI GCWGC 1 cut(s) 154
ApoI RAATTY 1 cut(s) 218
AsuHPI GGTGA 1 cut(s) 100
BbsI GAAGAC 1 cut(s) 195
BbvI GCAGC 1 cut(s) 141
BceAI ACGGC 1 cut(s) 9
BcuI ACTAGT 1 cut(s) 182
BfaI CTAG 2 cut(s) 183, 207
BisI GCNGC 1 cut(s) 155
BlsI GCNGC 1 cut(s) 156
BmgBI CACGTC 1 cut(s) 6
BpiI GAAGAC 1 cut(s) 195
BsaHI GRCGYC 1 cut(s) 140
BseMII CTCAG 1 cut(s) 34
BseRI GAGGAG 1 cut(s) 33
BseXI GCAGC 1 cut(s) 141
BspCNI CTCAG 1 cut(s) 33
BssNI GRCGYC 1 cut(s) 140
Bst6I CTCTTC 1 cut(s) 60
BstACI GRCGYC 1 cut(s) 140
BstDEI CTNAG 1 cut(s) 20
BstV1I GCAGC 1 cut(s) 141
BstV2I GAAGAC 1 cut(s) 195
BtrI CACGTC 1 cut(s) 6
CviJI RGCY 2 cut(s) 24, 210
CviKI_1 RGCY 2 cut(s) 24, 210
DdeI CTNAG 1 cut(s) 20
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
FaiI YATR 2 cut(s) 152, 226
Fnu4HI GCNGC 1 cut(s) 155
Fsp4HI GCNGC 1 cut(s) 155
FspBI CTAG 2 cut(s) 183, 207
GluI GCNGC 1 cut(s) 155
Hin1I GRCGYC 1 cut(s) 140
HinfI GANTC 1 cut(s) 146
HphI GGTGA 1 cut(s) 100
Hpy188I TCNGA 1 cut(s) 145
Hpy188III TCNNGA 1 cut(s) 77
HpyAV CCTTC 2 cut(s) 26, 106
HpyCH4IV ACGT 2 cut(s) 5, 140
HpyF3I CTNAG 1 cut(s) 20
HpySE526I ACGT 2 cut(s) 5, 140
Hsp92I GRCGYC 1 cut(s) 140
Lsp1109I GCAGC 1 cut(s) 141
MaeI CTAG 2 cut(s) 183, 207
MaeII ACGT 2 cut(s) 5, 140
MboII GAAGA 3 cut(s) 30, 47, 195
MluCI AATT 1 cut(s) 218
MlyI GAGTC 1 cut(s) 140
MnlI CCTC 7 cut(s) 39, 54, 63, 69, 79, 134, 175
PkrI GCNGC 1 cut(s) 156
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
SatI GCNGC 1 cut(s) 155
SchI GAGTC 1 cut(s) 140
SetI ASST 6 cut(s) 8, 18, 55, 71, 126, 143
SgeI CNNG 5 cut(s) 18, 23, 89, 195, 219
SpeI ACTAGT 1 cut(s) 182
Sse9I AATT 1 cut(s) 218
SspMI CTAG 2 cut(s) 183, 207
TaiI ACGT 2 cut(s) 8, 143
TasI AATT 1 cut(s) 218
TseI GCWGC 1 cut(s) 154
XapI RAATTY 1 cut(s) 218
XspI CTAG 2 cut(s) 183, 207
ZraI GACGTC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.