pycom05g10000
MYB Family

Telomere repeat-binding factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Reverse (-)
13274642 .. 13275853
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 219 bp
ATGGCGTCCCTAAAATTTGACAATGATGAGGCTATCCTGAAGAAAGCCCAAATTGATTTGGAGCTTGCGAAGATGAGGACTATGACCCCCAAAGAAGCTGCTTTAGCTGCTGCTCAAGCAGTGAAAGATGCAGAAGCGAAAGAGGCAAACAGGGAGGTTGATGCAGCTATGAAGACGCTAAAAGGAAGAAATGCTGCAAAGATGATGAAACGTCCCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

7.89

Weight (kDa)

9.57

Isoelectric Point (pI)

24.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 14
AcuI CTGAAG 1 cut(s) 59
AcyI GRCGYC 1 cut(s) 5
AluBI AGCT 4 cut(s) 64, 98, 107, 167
AluI AGCT 4 cut(s) 64, 98, 107, 167
ApeKI GCWGC 5 cut(s) 98, 107, 110, 164, 194
ApoI RAATTY 1 cut(s) 14
BbsI GAAGAC 1 cut(s) 179
BbvI GCAGC 5 cut(s) 85, 94, 97, 176, 181
BisI GCNGC 5 cut(s) 99, 108, 111, 165, 195
BlsI GCNGC 5 cut(s) 100, 109, 112, 166, 196
BmsI GCATC 2 cut(s) 118, 151
BpiI GAAGAC 1 cut(s) 179
BpuEI CTTGAG 1 cut(s) 99
BsaHI GRCGYC 1 cut(s) 5
BseXI GCAGC 5 cut(s) 85, 94, 97, 176, 181
BslFI GGGAC 1 cut(s) 198
BsmFI GGGAC 1 cut(s) 198
BssNI GRCGYC 1 cut(s) 5
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 1 cut(s) 66
BstMWI GCNNNNNNNGC 4 cut(s) 104, 107, 116, 143
BstV1I GCAGC 5 cut(s) 85, 94, 97, 176, 181
BstV2I GAAGAC 1 cut(s) 179
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 1 cut(s) 126
Cac8I GCNNGC 1 cut(s) 66
CseI GACGC 1 cut(s) 184
CviJI RGCY 6 cut(s) 32, 47, 64, 98, 107, 167
CviKI_1 RGCY 6 cut(s) 32, 47, 64, 98, 107, 167
Eco57I CTGAAG 1 cut(s) 59
FaiI YATR 2 cut(s) 83, 170
FaqI GGGAC 1 cut(s) 198
Fnu4HI GCNGC 5 cut(s) 99, 108, 111, 165, 195
Fsp4HI GCNGC 5 cut(s) 99, 108, 111, 165, 195
GluI GCNGC 5 cut(s) 99, 108, 111, 165, 195
HgaI GACGC 1 cut(s) 184
Hin1I GRCGYC 1 cut(s) 5
Hpy188III TCNNGA 1 cut(s) 37
HpyCH4IV ACGT 1 cut(s) 211
HpyCH4V TGCA 3 cut(s) 131, 164, 197
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 107, 116, 143
HpySE526I ACGT 1 cut(s) 211
Hsp92I GRCGYC 1 cut(s) 5
LmnI GCTCC 1 cut(s) 61
LpnPI CCDG 2 cut(s) 50, 136
Lsp1109I GCAGC 5 cut(s) 85, 94, 97, 176, 181
LweI GCATC 2 cut(s) 118, 151
MaeII ACGT 1 cut(s) 211
MboII GAAGA 4 cut(s) 52, 82, 184, 198
MluCI AATT 2 cut(s) 14, 51
MnlI CCTC 4 cut(s) 22, 69, 136, 148
MwoI GCNNNNNNNGC 4 cut(s) 104, 107, 116, 143
PkrI GCNGC 5 cut(s) 100, 109, 112, 166, 196
SatI GCNGC 5 cut(s) 99, 108, 111, 165, 195
SetI ASST 6 cut(s) 66, 100, 109, 159, 169, 214
SfaNI GCATC 2 cut(s) 118, 151
SgeI CNNG 4 cut(s) 49, 77, 128, 163
SmlI CTYRAG 1 cut(s) 114
SmoI CTYRAG 1 cut(s) 114
Sse9I AATT 2 cut(s) 14, 51
TaiI ACGT 1 cut(s) 214
TasI AATT 2 cut(s) 14, 51
TscAI CASTG 1 cut(s) 126
TseI GCWGC 5 cut(s) 98, 107, 110, 164, 194
TspDTI ATGAA 1 cut(s) 185
TspRI CASTG 1 cut(s) 126
XapI RAATTY 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.