pycom05g13290

Mini-chromosome maintenance complex-binding

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
16867385 .. 16867653
269 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 216 bp
ATGGAGCCTGATGTCGACAGGGATTTGCTTCATTGTCTTATTAAGGTACCACGTCTCCATTGTTTTATTCACAGGAAACTTGCAGTTCACGACTTCCTTCCTTGTTCCCCTACAATCACAGGAAACTTGGACTTCTATGCCTGTCTGCGTGTGTATATGCAAACCTGGGATCGATCTAAATTTCCGCACTTCCGCATCCTTCCCTTAATTACTTAG

Protein Analysis

72

Amino Acids

8.46

Weight (kDa)

8.47

Isoelectric Point (pI)

47.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 46
AccB1I GGYRCC 1 cut(s) 46
AccI GTMKAC 1 cut(s) 15
AciI CCGC 2 cut(s) 185, 193
AclWI GGATC 1 cut(s) 177
AcsI RAATTY 1 cut(s) 179
AfaI GTAC 1 cut(s) 48
AjiI CACGTC 1 cut(s) 53
AjnI CCWGG 1 cut(s) 164
Alw26I GTCTC 1 cut(s) 59
AlwI GGATC 1 cut(s) 177
ApoI RAATTY 1 cut(s) 179
Asp718I GGTACC 1 cut(s) 46
BanI GGYRCC 1 cut(s) 46
BciT130I CCWGG 1 cut(s) 166
BcoDI GTCTC 1 cut(s) 59
Bme1390I CCNGG 1 cut(s) 166
BmgBI CACGTC 1 cut(s) 53
BmiI GGNNCC 2 cut(s) 6, 48
BmrFI CCNGG 1 cut(s) 166
BmsI GCATC 1 cut(s) 204
Bsa29I ATCGAT 1 cut(s) 172
BsaJI CCNNGG 1 cut(s) 165
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
BseBI CCWGG 1 cut(s) 166
BseCI ATCGAT 1 cut(s) 172
BseDI CCNNGG 1 cut(s) 165
BseGI GGATG 1 cut(s) 195
BshNI GGYRCC 1 cut(s) 46
BshVI ATCGAT 1 cut(s) 172
BsmAI GTCTC 1 cut(s) 59
BsmBI CGTCTC 1 cut(s) 59
Bsp143I GATC 2 cut(s) 169, 173
BspACI CCGC 2 cut(s) 185, 193
BspDI ATCGAT 1 cut(s) 172
BspLI GGNNCC 2 cut(s) 6, 48
BspPI GGATC 1 cut(s) 177
BspT107I GGYRCC 1 cut(s) 46
BssECI CCNNGG 1 cut(s) 165
BssMI GATC 2 cut(s) 169, 173
Bst2UI CCWGG 1 cut(s) 166
BstDEI CTNAG 1 cut(s) 213
BstF5I GGATG 1 cut(s) 195
BstKTI GATC 2 cut(s) 172, 176
BstMAI GTCTC 1 cut(s) 59
BstMBI GATC 2 cut(s) 169, 173
BstNI CCWGG 1 cut(s) 166
BstSCI CCNGG 1 cut(s) 164
Bsu15I ATCGAT 1 cut(s) 172
BsuTUI ATCGAT 1 cut(s) 172
BtrI CACGTC 1 cut(s) 53
BtsCI GGATG 1 cut(s) 195
ClaI ATCGAT 1 cut(s) 172
Csp6I GTAC 1 cut(s) 47
CviJI RGCY 1 cut(s) 7
CviKI_1 RGCY 1 cut(s) 7
CviQI GTAC 1 cut(s) 47
DdeI CTNAG 1 cut(s) 213
DpnI GATC 2 cut(s) 171, 175
DpnII GATC 2 cut(s) 169, 173
EcoRII CCWGG 1 cut(s) 164
Esp3I CGTCTC 1 cut(s) 59
FaiI YATR 3 cut(s) 138, 156, 158
FblI GTMKAC 1 cut(s) 15
FokI GGATG 1 cut(s) 182
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
Hpy166II GTNNAC 2 cut(s) 16, 88
Hpy188III TCNNGA 1 cut(s) 89
Hpy8I GTNNAC 2 cut(s) 16, 88
HpyAV CCTTC 2 cut(s) 107, 209
HpyCH4IV ACGT 1 cut(s) 52
HpyCH4V TGCA 2 cut(s) 83, 160
HpyF3I CTNAG 1 cut(s) 213
HpySE526I ACGT 1 cut(s) 52
KpnI GGTACC 1 cut(s) 50
Kzo9I GATC 2 cut(s) 169, 173
LmnI GCTCC 1 cut(s) 4
LpnPI CCDG 7 cut(s) 4, 21, 58, 105, 151, 154, 178
LweI GCATC 1 cut(s) 204
MaeII ACGT 1 cut(s) 52
MalI GATC 2 cut(s) 171, 175
MboI GATC 2 cut(s) 169, 173
MluCI AATT 2 cut(s) 179, 207
MseI TTAA 2 cut(s) 42, 206
MspR9I CCNGG 1 cut(s) 166
MvaI CCWGG 1 cut(s) 166
NdeII GATC 2 cut(s) 169, 173
NlaIV GGNNCC 2 cut(s) 6, 48
Psp6I CCWGG 1 cut(s) 164
PspGI CCWGG 1 cut(s) 164
PspN4I GGNNCC 2 cut(s) 6, 48
RsaI GTAC 1 cut(s) 48
RsaNI GTAC 1 cut(s) 47
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 2 cut(s) 42, 206
Sau3AI GATC 2 cut(s) 169, 173
ScrFI CCNGG 1 cut(s) 166
SetI ASST 3 cut(s) 48, 55, 167
SfaNI GCATC 1 cut(s) 204
Sse9I AATT 2 cut(s) 179, 207
SsiI CCGC 2 cut(s) 185, 193
StyD4I CCNGG 1 cut(s) 164
TaiI ACGT 1 cut(s) 55
TaqI TCGA 2 cut(s) 15, 172
TasI AATT 2 cut(s) 179, 207
Tru1I TTAA 2 cut(s) 42, 206
Tru9I TTAA 2 cut(s) 42, 206
TspDTI ATGAA 1 cut(s) 20
XapI RAATTY 1 cut(s) 179
XmiI GTMKAC 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.