pycom05g19950

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Forward (+)
22902224 .. 22902523
300 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 300 bp
ATGGCTCTGCAAGAAGAACCCCAAGAGCTCCAAAACCCTCCAATGGCGTTCGATCCTTCATTATTTTGCGAAGAAGGATTTGAGGAAGATTTGGGAGACAATGGTAGTGAGGAGGAGAGCGAGAACTGTGATGGGTTTTCAAAAAAGCAATCGTCTTTCCCTTTGATTTTCCTGGAAAGTGATATATTCTGGGAAAATGATGAACTTTCCTCTCTAATCTCCAAAGAGGAACAAACCCCTATGTTTCAGTGGAGAAATCTCAGATGGGTCTTTGATGGCGGCTCGGAAGGAGGTGGTTGA

Protein Analysis

100

Amino Acids

11.29

Weight (kDa)

4.05

Isoelectric Point (pI)

89.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 279
AclWI GGATC 1 cut(s) 47
AfiI CCNNNNNNNGG 1 cut(s) 43
AgsI TTSAA 1 cut(s) 141
AjnI CCWGG 1 cut(s) 171
AluBI AGCT 1 cut(s) 28
AluI AGCT 1 cut(s) 28
Alw21I GWGCWC 1 cut(s) 30
Alw26I GTCTC 1 cut(s) 90
AlwI GGATC 1 cut(s) 47
BanII GRGCYC 1 cut(s) 30
Bbv12I GWGCWC 1 cut(s) 30
BccI CCATC 3 cut(s) 125, 258, 269
BciT130I CCWGG 1 cut(s) 173
BcoDI GTCTC 1 cut(s) 90
BisI GCNGC 1 cut(s) 280
BlsI GCNGC 1 cut(s) 281
Bme1390I CCNGG 1 cut(s) 173
BmrFI CCNGG 1 cut(s) 173
Bsc4I CCNNNNNNNGG 1 cut(s) 43
BseBI CCWGG 1 cut(s) 173
BseLI CCNNNNNNNGG 1 cut(s) 43
BseMII CTCAG 1 cut(s) 274
BseRI GAGGAG 2 cut(s) 125, 128
BsiHKAI GWGCWC 1 cut(s) 30
BslI CCNNNNNNNGG 1 cut(s) 43
BsmAI GTCTC 1 cut(s) 90
Bsp1286I GDGCHC 1 cut(s) 30
Bsp143I GATC 1 cut(s) 52
BspACI CCGC 1 cut(s) 279
BspCNI CTCAG 1 cut(s) 273
BspPI GGATC 1 cut(s) 47
BssMI GATC 1 cut(s) 52
Bst2UI CCWGG 1 cut(s) 173
Bst4CI ACNGT 1 cut(s) 128
BstDEI CTNAG 1 cut(s) 260
BstKTI GATC 1 cut(s) 55
BstMAI GTCTC 1 cut(s) 90
BstMBI GATC 1 cut(s) 52
BstNI CCWGG 1 cut(s) 173
BstSCI CCNGG 1 cut(s) 171
BtsIMutI CAGTG 1 cut(s) 254
CviJI RGCY 3 cut(s) 5, 28, 282
CviKI_1 RGCY 3 cut(s) 5, 28, 282
DdeI CTNAG 1 cut(s) 260
DpnI GATC 1 cut(s) 54
DpnII GATC 1 cut(s) 52
Ecl136II GAGCTC 1 cut(s) 28
Eco24I GRGCYC 1 cut(s) 30
Eco53kI GAGCTC 1 cut(s) 28
EcoICRI GAGCTC 1 cut(s) 28
EcoRII CCWGG 1 cut(s) 171
EcoT38I GRGCYC 1 cut(s) 30
FaiI YATR 2 cut(s) 185, 242
Fnu4HI GCNGC 1 cut(s) 280
FriOI GRGCYC 1 cut(s) 30
Fsp4HI GCNGC 1 cut(s) 280
GluI GCNGC 1 cut(s) 280
Hpy188I TCNGA 2 cut(s) 263, 286
HpyAV CCTTC 3 cut(s) 66, 68, 281
HpyCH4III ACNGT 1 cut(s) 128
HpyCH4V TGCA 1 cut(s) 10
HpyF3I CTNAG 1 cut(s) 260
Kzo9I GATC 1 cut(s) 52
LmnI GCTCC 1 cut(s) 33
LpnPI CCDG 3 cut(s) 158, 175, 185
MalI GATC 1 cut(s) 54
MboI GATC 1 cut(s) 52
MboII GAAGA 3 cut(s) 26, 83, 98
MhlI GDGCHC 1 cut(s) 30
MnlI CCTC 7 cut(s) 48, 76, 103, 106, 220, 220, 284
MspR9I CCNGG 1 cut(s) 173
MvaI CCWGG 1 cut(s) 173
NdeII GATC 1 cut(s) 52
PfoI TCCNGGA 1 cut(s) 171
PkrI GCNGC 1 cut(s) 281
Psp124BI GAGCTC 1 cut(s) 30
Psp6I CCWGG 1 cut(s) 171
PspGI CCWGG 1 cut(s) 171
SacI GAGCTC 1 cut(s) 30
SatI GCNGC 1 cut(s) 280
Sau3AI GATC 1 cut(s) 52
ScrFI CCNGG 1 cut(s) 173
SduI GDGCHC 1 cut(s) 30
SetI ASST 2 cut(s) 30, 295
SgeI CNNG 7 cut(s) 23, 35, 133, 184, 185, 202, 295
SsiI CCGC 1 cut(s) 279
SstI GAGCTC 1 cut(s) 30
StyD4I CCNGG 1 cut(s) 171
TaaI ACNGT 1 cut(s) 128
TaqI TCGA 1 cut(s) 51
TauI GCSGC 1 cut(s) 282
TscAI CASTG 1 cut(s) 254
TspDTI ATGAA 2 cut(s) 48, 216
TspRI CASTG 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.