MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SRF-TF | PF00319 | 212 - 259 | 5.6e-23 | SRF-type transcription factor (DNA-binding and dimerisation domain) |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 490 |
| AcsI | RAATTY | 4 cut(s) | 116, 159, 427, 1177 |
| AfaI | GTAC | 2 cut(s) | 440, 776 |
| AgsI | TTSAA | 3 cut(s) | 166, 529, 964 |
| AjnI | CCWGG | 1 cut(s) | 369 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 534, 566 |
| AluBI | AGCT | 3 cut(s) | 220, 570, 709 |
| AluI | AGCT | 3 cut(s) | 220, 570, 709 |
| Alw21I | GWGCWC | 1 cut(s) | 1116 |
| AoxI | GGCC | 1 cut(s) | 736 |
| ApoI | RAATTY | 4 cut(s) | 116, 159, 427, 1177 |
| AseI | ATTAAT | 1 cut(s) | 903 |
| AspS9I | GGNCC | 1 cut(s) | 206 |
| AsuII | TTCGAA | 1 cut(s) | 157 |
| AvaII | GGWCC | 1 cut(s) | 206 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 581, 613 |
| BbsI | GAAGAC | 1 cut(s) | 704 |
| Bbv12I | GWGCWC | 1 cut(s) | 1116 |
| BccI | CCATC | 2 cut(s) | 562, 860 |
| BciT130I | CCWGG | 1 cut(s) | 371 |
| BclI | TGATCA | 2 cut(s) | 385, 690 |
| BfaI | CTAG | 1 cut(s) | 567 |
| BfmI | CTRYAG | 1 cut(s) | 778 |
| BmcAI | AGTACT | 1 cut(s) | 776 |
| Bme1390I | CCNGG | 1 cut(s) | 371 |
| Bme18I | GGWCC | 1 cut(s) | 206 |
| BmgT120I | GGNCC | 1 cut(s) | 206 |
| BmiI | GGNNCC | 1 cut(s) | 375 |
| BmrFI | CCNGG | 1 cut(s) | 371 |
| BmsI | GCATC | 1 cut(s) | 715 |
| BpiI | GAAGAC | 1 cut(s) | 704 |
| Bpu14I | TTCGAA | 1 cut(s) | 157 |
| BpuEI | CTTGAG | 1 cut(s) | 736 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 534, 564 |
| Bse1I | ACTGG | 2 cut(s) | 541, 763 |
| BseBI | CCWGG | 1 cut(s) | 371 |
| BseMII | CTCAG | 1 cut(s) | 1101 |
| BseNI | ACTGG | 2 cut(s) | 541, 763 |
| BseRI | GAGGAG | 2 cut(s) | 39, 1031 |
| BshFI | GGCC | 1 cut(s) | 738 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1116 |
| BsnI | GGCC | 1 cut(s) | 738 |
| Bsp119I | TTCGAA | 1 cut(s) | 157 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1116 |
| Bsp143I | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| BspACI | CCGC | 1 cut(s) | 490 |
| BspANI | GGCC | 1 cut(s) | 738 |
| BspCNI | CTCAG | 1 cut(s) | 1102 |
| BspHI | TCATGA | 2 cut(s) | 703, 877 |
| BspLI | GGNNCC | 1 cut(s) | 375 |
| BspMAI | CTGCAG | 1 cut(s) | 782 |
| BspT104I | TTCGAA | 1 cut(s) | 157 |
| BsrI | ACTGG | 2 cut(s) | 541, 763 |
| BssMI | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| Bst2UI | CCWGG | 1 cut(s) | 371 |
| Bst6I | CTCTTC | 2 cut(s) | 339, 982 |
| BstBI | TTCGAA | 1 cut(s) | 157 |
| BstDEI | CTNAG | 3 cut(s) | 221, 252, 1110 |
| BstKTI | GATC | 7 cut(s) | 388, 693, 735, 883, 932, 1008, 1128 |
| BstMBI | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 715 |
| BstNI | CCWGG | 1 cut(s) | 371 |
| BstNSI | RCATGY | 1 cut(s) | 502 |
| BstSCI | CCNGG | 1 cut(s) | 369 |
| BstSFI | CTRYAG | 1 cut(s) | 778 |
| BstV2I | GAAGAC | 1 cut(s) | 704 |
| BsuRI | GGCC | 1 cut(s) | 738 |
| BtsI | GCAGTG | 1 cut(s) | 787 |
| BtsIMutI | CAGTG | 4 cut(s) | 534, 756, 787, 1008 |
| CciI | TCATGA | 2 cut(s) | 703, 877 |
| Cfr13I | GGNCC | 1 cut(s) | 206 |
| CsiI | ACCWGGT | 1 cut(s) | 369 |
| Csp6I | GTAC | 2 cut(s) | 439, 775 |
| CviAII | CATG | 4 cut(s) | 142, 499, 704, 878 |
| CviJI | RGCY | 7 cut(s) | 220, 570, 688, 709, 738, 1161, 1169 |
| CviKI_1 | RGCY | 7 cut(s) | 220, 570, 688, 709, 738, 1161, 1169 |
| CviQI | GTAC | 2 cut(s) | 439, 775 |
| DdeI | CTNAG | 3 cut(s) | 221, 252, 1110 |
| DpnI | GATC | 7 cut(s) | 387, 692, 734, 882, 931, 1007, 1127 |
| DpnII | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| DraI | TTTAAA | 1 cut(s) | 1182 |
| Eam1104I | CTCTTC | 2 cut(s) | 339, 982 |
| EarI | CTCTTC | 2 cut(s) | 339, 982 |
| Eco47I | GGWCC | 1 cut(s) | 206 |
| EcoRII | CCWGG | 1 cut(s) | 369 |
| FaeI | CATG | 4 cut(s) | 145, 502, 707, 881 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 261, 293, 784, 816 |
| FatI | CATG | 4 cut(s) | 141, 498, 703, 877 |
| FbaI | TGATCA | 2 cut(s) | 385, 690 |
| FspBI | CTAG | 1 cut(s) | 567 |
| HaeIII | GGCC | 1 cut(s) | 738 |
| Hin1II | CATG | 4 cut(s) | 145, 502, 707, 881 |
| HinfI | GANTC | 4 cut(s) | 154, 543, 700, 785 |
| Hpy188I | TCNGA | 4 cut(s) | 385, 548, 852, 1111 |
| Hpy188III | TCNNGA | 4 cut(s) | 694, 704, 792, 878 |
| Hpy99I | CGWCG | 1 cut(s) | 681 |
| HpyAV | CCTTC | 2 cut(s) | 287, 606 |
| HpyCH4V | TGCA | 1 cut(s) | 780 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 715 |
| HpyF3I | CTNAG | 3 cut(s) | 221, 252, 1110 |
| Hsp92II | CATG | 4 cut(s) | 145, 502, 707, 881 |
| Ksp22I | TGATCA | 2 cut(s) | 385, 690 |
| Kzo9I | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| LweI | GCATC | 1 cut(s) | 715 |
| MabI | ACCWGGT | 1 cut(s) | 369 |
| MaeI | CTAG | 1 cut(s) | 567 |
| MaeIII | GTNAC | 3 cut(s) | 227, 661, 887 |
| MalI | GATC | 7 cut(s) | 387, 692, 734, 882, 931, 1007, 1127 |
| MboI | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| MboII | GAAGA | 5 cut(s) | 326, 555, 601, 709, 969 |
| MfeI | CAATTG | 2 cut(s) | 210, 1195 |
| MhlI | GDGCHC | 1 cut(s) | 1116 |
| MlyI | GAGTC | 3 cut(s) | 552, 694, 794 |
| MseI | TTAA | 7 cut(s) | 48, 62, 170, 423, 903, 1097, 1181 |
| MslI | CAYNNNNRTG | 2 cut(s) | 497, 605 |
| MspR9I | CCNGG | 1 cut(s) | 371 |
| MunI | CAATTG | 2 cut(s) | 210, 1195 |
| MvaI | CCWGG | 1 cut(s) | 371 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 715 |
| NdeII | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| NlaIII | CATG | 4 cut(s) | 145, 502, 707, 881 |
| NlaIV | GGNNCC | 1 cut(s) | 375 |
| NmuCI | GTSAC | 1 cut(s) | 661 |
| NspI | RCATGY | 1 cut(s) | 502 |
| NspV | TTCGAA | 1 cut(s) | 157 |
| PagI | TCATGA | 2 cut(s) | 703, 877 |
| PfeI | GAWTC | 1 cut(s) | 154 |
| PleI | GAGTC | 3 cut(s) | 551, 694, 793 |
| PpsI | GAGTC | 3 cut(s) | 551, 694, 793 |
| PshBI | ATTAAT | 1 cut(s) | 903 |
| Psp6I | CCWGG | 1 cut(s) | 369 |
| PspGI | CCWGG | 1 cut(s) | 369 |
| PspN4I | GGNNCC | 1 cut(s) | 375 |
| PspPI | GGNCC | 1 cut(s) | 206 |
| PstI | CTGCAG | 1 cut(s) | 782 |
| RsaI | GTAC | 2 cut(s) | 440, 776 |
| RsaNI | GTAC | 2 cut(s) | 439, 775 |
| RseI | CAYNNNNRTG | 2 cut(s) | 497, 605 |
| SaqAI | TTAA | 7 cut(s) | 48, 62, 170, 423, 903, 1097, 1181 |
| Sau3AI | GATC | 7 cut(s) | 385, 690, 732, 880, 929, 1005, 1125 |
| Sau96I | GGNCC | 1 cut(s) | 206 |
| ScaI | AGTACT | 1 cut(s) | 776 |
| SchI | GAGTC | 3 cut(s) | 552, 694, 794 |
| ScrFI | CCNGG | 1 cut(s) | 371 |
| SduI | GDGCHC | 1 cut(s) | 1116 |
| SetI | ASST | 6 cut(s) | 222, 375, 572, 599, 711, 1124 |
| SexAI | ACCWGGT | 1 cut(s) | 369 |
| SfaNI | GCATC | 1 cut(s) | 715 |
| SfcI | CTRYAG | 1 cut(s) | 778 |
| SfuI | TTCGAA | 1 cut(s) | 157 |
| SinI | GGWCC | 1 cut(s) | 206 |
| SmiI | ATTTAAAT | 1 cut(s) | 1182 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 497, 605 |
| SmlI | CTYRAG | 1 cut(s) | 751 |
| SmoI | CTYRAG | 1 cut(s) | 751 |
| SsiI | CCGC | 1 cut(s) | 490 |
| SspMI | CTAG | 1 cut(s) | 567 |
| StyD4I | CCNGG | 1 cut(s) | 369 |
| SwaI | ATTTAAAT | 1 cut(s) | 1182 |
| TaqI | TCGA | 2 cut(s) | 157, 632 |
| TatI | WGTACW | 1 cut(s) | 774 |
| TfiI | GAWTC | 1 cut(s) | 154 |
| Tru1I | TTAA | 7 cut(s) | 48, 62, 170, 423, 903, 1097, 1181 |
| Tru9I | TTAA | 7 cut(s) | 48, 62, 170, 423, 903, 1097, 1181 |
| TscAI | CASTG | 4 cut(s) | 541, 763, 787, 1008 |
| TseFI | GTSAC | 1 cut(s) | 661 |
| Tsp45I | GTSAC | 1 cut(s) | 661 |
| TspDTI | ATGAA | 4 cut(s) | 130, 408, 452, 906 |
| TspGWI | ACGGA | 1 cut(s) | 219 |
| TspRI | CASTG | 4 cut(s) | 541, 763, 787, 1008 |
| VpaK11BI | GGWCC | 1 cut(s) | 206 |
| VspI | ATTAAT | 1 cut(s) | 903 |
| XapI | RAATTY | 4 cut(s) | 116, 159, 427, 1177 |
| XceI | RCATGY | 1 cut(s) | 502 |
| XspI | CTAG | 1 cut(s) | 567 |
| ZrmI | AGTACT | 1 cut(s) | 776 |