Protein ROOT HAIR DEFECTIVE 3 homolog
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Sey1_3HB | PF20428 | 6 - 165 | 3.7e-30 | Sey1 three-helix bundle domain |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 398 |
| AcsI | RAATTY | 2 cut(s) | 176, 447 |
| AcuI | CTGAAG | 1 cut(s) | 498 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 59, 498 |
| AflII | CTTAAG | 2 cut(s) | 104, 386 |
| AgsI | TTSAA | 4 cut(s) | 90, 166, 181, 443 |
| AhlI | ACTAGT | 1 cut(s) | 38 |
| AluBI | AGCT | 3 cut(s) | 109, 356, 375 |
| AluI | AGCT | 3 cut(s) | 109, 356, 375 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 53 |
| Ama87I | CYCGRG | 1 cut(s) | 493 |
| ApeKI | GCWGC | 1 cut(s) | 356 |
| ApoI | RAATTY | 2 cut(s) | 176, 447 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 41, 73 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 447 |
| AspA2I | CCTAGG | 1 cut(s) | 323 |
| AvaI | CYCGRG | 1 cut(s) | 493 |
| AvrII | CCTAGG | 1 cut(s) | 323 |
| BbsI | GAAGAC | 2 cut(s) | 289, 486 |
| BbvI | GCAGC | 1 cut(s) | 343 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BcuI | ACTAGT | 1 cut(s) | 38 |
| BfaI | CTAG | 2 cut(s) | 39, 324 |
| BfrI | CTTAAG | 2 cut(s) | 104, 386 |
| BisI | GCNGC | 1 cut(s) | 357 |
| BlnI | CCTAGG | 1 cut(s) | 323 |
| BlsI | GCNGC | 1 cut(s) | 358 |
| BmeT110I | CYCGRG | 1 cut(s) | 493 |
| BmsI | GCATC | 1 cut(s) | 38 |
| BpiI | GAAGAC | 2 cut(s) | 289, 486 |
| BpuEI | CTTGAG | 1 cut(s) | 131 |
| BsaJI | CCNNGG | 1 cut(s) | 323 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 59, 498 |
| Bse3DI | GCAATG | 2 cut(s) | 13, 192 |
| BseDI | CCNNGG | 1 cut(s) | 323 |
| BseGI | GGATG | 2 cut(s) | 29, 427 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 59, 498 |
| BseMI | GCAATG | 2 cut(s) | 13, 192 |
| BseMII | CTCAG | 1 cut(s) | 45 |
| BseXI | GCAGC | 1 cut(s) | 343 |
| BsiHKCI | CYCGRG | 1 cut(s) | 493 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 59, 498 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| BsoBI | CYCGRG | 1 cut(s) | 493 |
| BspACI | CCGC | 1 cut(s) | 398 |
| BspCNI | CTCAG | 1 cut(s) | 46 |
| BspTI | CTTAAG | 2 cut(s) | 104, 386 |
| BsrDI | GCAATG | 2 cut(s) | 13, 192 |
| BssECI | CCNNGG | 1 cut(s) | 323 |
| BssT1I | CCWWGG | 1 cut(s) | 323 |
| Bst6I | CTCTTC | 1 cut(s) | 492 |
| BstAFI | CTTAAG | 2 cut(s) | 104, 386 |
| BstC8I | GCNNGC | 1 cut(s) | 373 |
| BstDEI | CTNAG | 1 cut(s) | 54 |
| BstF5I | GGATG | 2 cut(s) | 29, 427 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 377, 404 |
| BstNSI | RCATGY | 1 cut(s) | 82 |
| BstV1I | GCAGC | 1 cut(s) | 343 |
| BstV2I | GAAGAC | 2 cut(s) | 289, 486 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 418 |
| BtsCI | GGATG | 2 cut(s) | 29, 427 |
| Cac8I | GCNNGC | 1 cut(s) | 373 |
| CaiI | CAGNNNCTG | 1 cut(s) | 53 |
| CviAII | CATG | 1 cut(s) | 79 |
| CviJI | RGCY | 6 cut(s) | 109, 322, 356, 371, 375, 407 |
| CviKI_1 | RGCY | 6 cut(s) | 109, 322, 356, 371, 375, 407 |
| DdeI | CTNAG | 1 cut(s) | 54 |
| Eam1104I | CTCTTC | 1 cut(s) | 492 |
| EarI | CTCTTC | 1 cut(s) | 492 |
| Eco130I | CCWWGG | 1 cut(s) | 323 |
| Eco57I | CTGAAG | 1 cut(s) | 498 |
| Eco88I | CYCGRG | 1 cut(s) | 493 |
| EcoRI | GAATTC | 2 cut(s) | 176, 447 |
| EcoT14I | CCWWGG | 1 cut(s) | 323 |
| ErhI | CCWWGG | 1 cut(s) | 323 |
| FaeI | CATG | 1 cut(s) | 82 |
| FaiI | YATR | 4 cut(s) | 80, 146, 404, 438 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 471, 503 |
| FatI | CATG | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 1 cut(s) | 357 |
| FokI | GGATG | 2 cut(s) | 16, 434 |
| Fsp4HI | GCNGC | 1 cut(s) | 357 |
| FspBI | CTAG | 2 cut(s) | 39, 324 |
| GluI | GCNGC | 1 cut(s) | 357 |
| Hin1II | CATG | 1 cut(s) | 82 |
| HindIII | AAGCTT | 1 cut(s) | 107 |
| HinfI | GANTC | 2 cut(s) | 100, 482 |
| HpyAV | CCTTC | 3 cut(s) | 68, 90, 437 |
| HpyCH4V | TGCA | 2 cut(s) | 29, 277 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 377, 404 |
| HpyF3I | CTNAG | 1 cut(s) | 54 |
| Hsp92II | CATG | 1 cut(s) | 82 |
| LpnPI | CCDG | 3 cut(s) | 66, 226, 385 |
| Lsp1109I | GCAGC | 1 cut(s) | 343 |
| LweI | GCATC | 1 cut(s) | 38 |
| MaeI | CTAG | 2 cut(s) | 39, 324 |
| MaeIII | GTNAC | 1 cut(s) | 302 |
| MboII | GAAGA | 4 cut(s) | 289, 352, 479, 491 |
| MluCI | AATT | 5 cut(s) | 176, 313, 433, 447, 516 |
| MlyI | GAGTC | 1 cut(s) | 476 |
| MnlI | CCTC | 3 cut(s) | 214, 276, 502 |
| MroXI | GAANNNNTTC | 1 cut(s) | 447 |
| MseI | TTAA | 8 cut(s) | 35, 105, 137, 159, 200, 387, 464, 520 |
| MspA1I | CMGCKG | 1 cut(s) | 356 |
| MspCI | CTTAAG | 2 cut(s) | 104, 386 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 377, 404 |
| NlaIII | CATG | 1 cut(s) | 82 |
| NspI | RCATGY | 1 cut(s) | 82 |
| PaeR7I | CTCGAG | 1 cut(s) | 493 |
| PdmI | GAANNNNTTC | 1 cut(s) | 447 |
| PfeI | GAWTC | 1 cut(s) | 100 |
| PkrI | GCNGC | 1 cut(s) | 358 |
| PleI | GAGTC | 1 cut(s) | 476 |
| PpsI | GAGTC | 1 cut(s) | 476 |
| PspXI | VCTCGAGB | 1 cut(s) | 493 |
| PstNI | CAGNNNCTG | 1 cut(s) | 53 |
| PvuII | CAGCTG | 1 cut(s) | 356 |
| SaqAI | TTAA | 8 cut(s) | 35, 105, 137, 159, 200, 387, 464, 520 |
| SatI | GCNGC | 1 cut(s) | 357 |
| SchI | GAGTC | 1 cut(s) | 476 |
| SetI | ASST | 7 cut(s) | 111, 137, 153, 225, 287, 358, 377 |
| SfaNI | GCATC | 1 cut(s) | 38 |
| Sfr274I | CTCGAG | 1 cut(s) | 493 |
| SlaI | CTCGAG | 1 cut(s) | 493 |
| SmlI | CTYRAG | 4 cut(s) | 104, 110, 386, 493 |
| SmoI | CTYRAG | 4 cut(s) | 104, 110, 386, 493 |
| SpeI | ACTAGT | 1 cut(s) | 38 |
| Sse9I | AATT | 5 cut(s) | 176, 313, 433, 447, 516 |
| SsiI | CCGC | 1 cut(s) | 398 |
| SspMI | CTAG | 2 cut(s) | 39, 324 |
| StyI | CCWWGG | 1 cut(s) | 323 |
| TaqI | TCGA | 1 cut(s) | 494 |
| TasI | AATT | 5 cut(s) | 176, 313, 433, 447, 516 |
| TfiI | GAWTC | 1 cut(s) | 100 |
| Tru1I | TTAA | 8 cut(s) | 35, 105, 137, 159, 200, 387, 464, 520 |
| Tru9I | TTAA | 8 cut(s) | 35, 105, 137, 159, 200, 387, 464, 520 |
| TseI | GCWGC | 1 cut(s) | 356 |
| Vha464I | CTTAAG | 2 cut(s) | 104, 386 |
| XapI | RAATTY | 2 cut(s) | 176, 447 |
| XceI | RCATGY | 1 cut(s) | 82 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 220 |
| XhoI | CTCGAG | 1 cut(s) | 493 |
| XmaJI | CCTAGG | 1 cut(s) | 323 |
| XmnI | GAANNNNTTC | 1 cut(s) | 447 |
| XspI | CTAG | 2 cut(s) | 39, 324 |