pycom05g25990

Hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Reverse (-)
27275035 .. 27275250
216 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 216 bp
ATGCAACTTGTTGTGCCTGCTGTACCTTTGAATAGCATTGCAGTGAAATTTCCTTACTTGGTTAAGAAAAAACTTGCTGAAGGACAAGAAGTGAGACGGGTAGCACAACTTGACTGGAGGATAATTGAGGAGAGTATTGAAACACCGTTTCTTGCGTCAGGCCTACAATTTGCTCCTTTGCCAGTTACGCTCATCAAACCTTTCTTAGTCTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

7.96

Weight (kDa)

8.98

Isoelectric Point (pI)

61.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 47
AcuI CTGAAG 1 cut(s) 99
AfaI GTAC 1 cut(s) 24
AgsI TTSAA 2 cut(s) 31, 140
Alw26I GTCTC 1 cut(s) 88
AoxI GGCC 1 cut(s) 160
ApoI RAATTY 1 cut(s) 47
BcoDI GTCTC 1 cut(s) 88
BpmI CTGGAG 1 cut(s) 136
Bse1I ACTGG 2 cut(s) 119, 182
Bse3DI GCAATG 1 cut(s) 36
BseMI GCAATG 1 cut(s) 36
BseNI ACTGG 2 cut(s) 119, 182
BseRI GAGGAG 1 cut(s) 143
BshFI GGCC 1 cut(s) 162
BsmAI GTCTC 1 cut(s) 88
BsmBI CGTCTC 1 cut(s) 88
BsnI GGCC 1 cut(s) 162
BspANI GGCC 1 cut(s) 162
BsrDI GCAATG 1 cut(s) 36
BsrI ACTGG 2 cut(s) 119, 182
Bst4CI ACNGT 1 cut(s) 147
BstC8I GCNNGC 1 cut(s) 18
BstDEI CTNAG 1 cut(s) 205
BstMAI GTCTC 1 cut(s) 88
BstMWI GCNNNNNNNGC 1 cut(s) 187
BsuRI GGCC 1 cut(s) 162
BtsI GCAGTG 1 cut(s) 48
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 18
CseI GACGC 1 cut(s) 144
Csp6I GTAC 1 cut(s) 23
CviJI RGCY 1 cut(s) 162
CviKI_1 RGCY 1 cut(s) 162
CviQI GTAC 1 cut(s) 23
DdeI CTNAG 1 cut(s) 205
Eco147I AGGCCT 1 cut(s) 162
Eco57I CTGAAG 1 cut(s) 99
Esp3I CGTCTC 1 cut(s) 88
GsuI CTGGAG 1 cut(s) 136
HaeIII GGCC 1 cut(s) 162
HgaI GACGC 1 cut(s) 144
HpyAV CCTTC 1 cut(s) 74
HpyCH4III ACNGT 1 cut(s) 147
HpyCH4V TGCA 2 cut(s) 4, 41
HpyF10VI GCNNNNNNNGC 1 cut(s) 187
HpyF3I CTNAG 1 cut(s) 205
LmnI GCTCC 1 cut(s) 178
LpnPI CCDG 4 cut(s) 30, 100, 144, 195
MaeIII GTNAC 1 cut(s) 184
MluCI AATT 3 cut(s) 47, 123, 167
MnlI CCTC 2 cut(s) 111, 121
MseI TTAA 1 cut(s) 63
MslI CAYNNNNRTG 1 cut(s) 41
MwoI GCNNNNNNNGC 1 cut(s) 187
PceI AGGCCT 1 cut(s) 162
RsaI GTAC 1 cut(s) 24
RsaNI GTAC 1 cut(s) 23
RseI CAYNNNNRTG 1 cut(s) 41
SaqAI TTAA 1 cut(s) 63
SetI ASST 2 cut(s) 28, 202
SmiMI CAYNNNNRTG 1 cut(s) 41
Sse9I AATT 3 cut(s) 47, 123, 167
SseBI AGGCCT 1 cut(s) 162
StuI AGGCCT 1 cut(s) 162
TaaI ACNGT 1 cut(s) 147
TasI AATT 3 cut(s) 47, 123, 167
Tru1I TTAA 1 cut(s) 63
Tru9I TTAA 1 cut(s) 63
TscAI CASTG 1 cut(s) 48
TspRI CASTG 1 cut(s) 48
XapI RAATTY 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.