pycom05g30950

transmembrane receptor protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
N/A
Physical Location & Seq
Reverse (-)
30867352 .. 30867933
582 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 537 bp
ATGTCTCTACCGGCGTTTGCAAAGAGCGTGGCCATCACAAACGTGGAGGCAGCACAACGCTGCCCTGATGGAAAAGAGGTTATCATATGGTACGACGAGTGCATGCATTCGGCGGGCGATTGGTATGGGGATAATAAACCAACCGGATATAGCCAGGCAGTCGCAACTAGTGTGCATGAGCTAACCACTGGGGCTGCCAATAAAGGGTCAAATGAGACTGTACAGCCTTGTGCAGTGCACGCAGGACCTCTCCGCTTCAGATTTCAAACGATGTCTAGCAAAAGCTGCAGAAGAATAGTTTCAACGGTATCCCGGGGGGACGATTTCTATATCCTAGTTGTAGTGTTCGGTTCGATGATGCACTCTTTTAAGCGATCAATTGGACAGCCGCACATCATCCTCCCACGCCAGAGGCTCTTCCTCCTCCTAGTACTCTACTACTATATTCACGTTCACCACCCAATGATGATACCTATAGGCAAAGTACCTTGTGCACATAAAAAAGTCATCATGCACTCTTCTCTACTACGAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr Stress-antifung

Protein Analysis

179

Amino Acids

19.92

Weight (kDa)

9.42

Isoelectric Point (pI)

55.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 113, 253, 389
AcoI YGGCCR 1 cut(s) 30
AcuI CTGAAG 1 cut(s) 241
AfaI GTAC 4 cut(s) 92, 222, 432, 486
AfiI CCNNNNNNNGG 1 cut(s) 204
AgsI TTSAA 2 cut(s) 266, 303
AhlI ACTAGT 1 cut(s) 167
AjnI CCWGG 1 cut(s) 153
AleI CACNNNNGTG 1 cut(s) 41
AluBI AGCT 2 cut(s) 181, 285
AluI AGCT 2 cut(s) 181, 285
Alw21I GWGCWC 2 cut(s) 240, 496
Alw26I GTCTC 2 cut(s) 9, 209
Alw44I GTGCAC 2 cut(s) 236, 492
Ama87I CYCGRG 1 cut(s) 312
AoxI GGCC 1 cut(s) 30
ApaLI GTGCAC 2 cut(s) 236, 492
ApeKI GCWGC 4 cut(s) 50, 60, 194, 285
Asp700I GAANNNNTTC 1 cut(s) 298
AspS9I GGNCC 1 cut(s) 245
AsuC2I CCSGG 2 cut(s) 313, 314
AsuHPI GGTGA 1 cut(s) 446
AvaI CYCGRG 1 cut(s) 312
AvaII GGWCC 1 cut(s) 245
BaeGI GKGCMC 2 cut(s) 240, 496
BalI TGGCCA 1 cut(s) 32
Bbv12I GWGCWC 2 cut(s) 240, 496
BbvI GCAGC 4 cut(s) 47, 62, 181, 272
BccI CCATC 2 cut(s) 41, 62
BciT130I CCWGG 1 cut(s) 155
BciVI GTATCC 1 cut(s) 319
BcnI CCSGG 2 cut(s) 313, 314
BcoDI GTCTC 2 cut(s) 9, 209
BcuI ACTAGT 1 cut(s) 167
BfaI CTAG 4 cut(s) 168, 276, 335, 428
BfmI CTRYAG 2 cut(s) 286, 474
BfuI GTATCC 1 cut(s) 319
BisI GCNGC 5 cut(s) 51, 61, 195, 286, 389
BlsI GCNGC 5 cut(s) 52, 62, 196, 287, 390
BmcAI AGTACT 1 cut(s) 432
Bme1390I CCNGG 3 cut(s) 155, 313, 314
Bme18I GGWCC 1 cut(s) 245
BmeT110I CYCGRG 1 cut(s) 312
BmgT120I GGNCC 1 cut(s) 245
BmrFI CCNGG 3 cut(s) 155, 313, 314
BmrI ACTGGG 1 cut(s) 198
BmsI GCATC 1 cut(s) 348
BmuI ACTGGG 1 cut(s) 198
BpuMI CCSGG 2 cut(s) 313, 314
BsaJI CCNNGG 2 cut(s) 312, 313
BsaWI WCCGGW 1 cut(s) 143
Bsc4I CCNNNNNNNGG 1 cut(s) 204
Bse118I RCCGGY 1 cut(s) 10
Bse1I ACTGG 1 cut(s) 193
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 2 cut(s) 312, 313
BseGI GGATG 1 cut(s) 396
BseLI CCNNNNNNNGG 1 cut(s) 204
BseNI ACTGG 1 cut(s) 193
BseRI GAGGAG 1 cut(s) 413
BseSI GKGCMC 2 cut(s) 240, 496
BseXI GCAGC 4 cut(s) 47, 62, 181, 272
BsgI GTGCAG 1 cut(s) 252
BshFI GGCC 1 cut(s) 32
BsiHKAI GWGCWC 2 cut(s) 240, 496
BsiHKCI CYCGRG 1 cut(s) 312
BsiSI CCGG 3 cut(s) 11, 144, 313
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 1 cut(s) 204
BsmAI GTCTC 2 cut(s) 9, 209
BsmFI GGGAC 1 cut(s) 332
BsmI GAATGC 1 cut(s) 106
BsnI GGCC 1 cut(s) 32
BsoBI CYCGRG 1 cut(s) 312
Bsp1286I GDGCHC 2 cut(s) 240, 496
Bsp1407I TGTACA 1 cut(s) 220
Bsp143I GATC 1 cut(s) 374
BspACI CCGC 3 cut(s) 113, 253, 389
BspANI GGCC 1 cut(s) 32
BspMAI CTGCAG 1 cut(s) 290
BspQI GCTCTTC 1 cut(s) 422
BsrFI RCCGGY 1 cut(s) 10
BsrGI TGTACA 1 cut(s) 220
BsrI ACTGG 1 cut(s) 193
BssAI RCCGGY 1 cut(s) 10
BssECI CCNNGG 2 cut(s) 312, 313
BssMI GATC 1 cut(s) 374
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 2 cut(s) 220, 307
Bst6I CTCTTC 2 cut(s) 422, 523
BstAPI GCANNNNNTGC 1 cut(s) 285
BstAUI TGTACA 1 cut(s) 220
BstC8I GCNNGC 3 cut(s) 104, 115, 240
BstF5I GGATG 1 cut(s) 396
BstKTI GATC 1 cut(s) 377
BstMAI GTCTC 2 cut(s) 9, 209
BstMBI GATC 1 cut(s) 374
BstMWI GCNNNNNNNGC 2 cut(s) 239, 285
BstNI CCWGG 1 cut(s) 155
BstNSI RCATGY 1 cut(s) 106
BstSCI CCNGG 3 cut(s) 153, 311, 312
BstSFI CTRYAG 2 cut(s) 286, 474
BstSLI GKGCMC 2 cut(s) 240, 496
BstV1I GCAGC 4 cut(s) 47, 62, 181, 272
BsuI GTATCC 1 cut(s) 319
BsuRI GGCC 1 cut(s) 32
BtsCI GGATG 1 cut(s) 396
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 2 cut(s) 186, 240
Cac8I GCNNGC 3 cut(s) 104, 115, 240
Cfr10I RCCGGY 1 cut(s) 10
Cfr13I GGNCC 1 cut(s) 245
Cfr9I CCCGGG 1 cut(s) 312
Csp6I GTAC 4 cut(s) 91, 221, 431, 485
CspCI CAANNNNNGTGG 2 cut(s) 9, 44
CviAII CATG 3 cut(s) 103, 176, 511
CviJI RGCY 8 cut(s) 32, 153, 181, 194, 226, 285, 388, 415
CviKI_1 RGCY 8 cut(s) 32, 153, 181, 194, 226, 285, 388, 415
CviQI GTAC 4 cut(s) 91, 221, 431, 485
DpnI GATC 1 cut(s) 376
DpnII GATC 1 cut(s) 374
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 2 cut(s) 422, 523
EarI CTCTTC 2 cut(s) 422, 523
Eco47I GGWCC 1 cut(s) 245
Eco57I CTGAAG 1 cut(s) 241
Eco88I CYCGRG 1 cut(s) 312
EcoO109I RGGNCCY 1 cut(s) 245
EcoRII CCWGG 1 cut(s) 153
EcoT22I ATGCAT 1 cut(s) 108
FaeI CATG 3 cut(s) 106, 179, 514
FaqI GGGAC 1 cut(s) 332
FatI CATG 3 cut(s) 102, 175, 510
FauI CCCGC 1 cut(s) 106
FauNDI CATATG 1 cut(s) 86
Fnu4HI GCNGC 5 cut(s) 51, 61, 195, 286, 389
FokI GGATG 1 cut(s) 383
Fsp4HI GCNGC 5 cut(s) 51, 61, 195, 286, 389
FspBI CTAG 4 cut(s) 168, 276, 335, 428
GluI GCNGC 5 cut(s) 51, 61, 195, 286, 389
HaeIII GGCC 1 cut(s) 32
HapII CCGG 3 cut(s) 11, 144, 313
Hin1II CATG 3 cut(s) 106, 179, 514
HpaII CCGG 3 cut(s) 11, 144, 313
HphI GGTGA 1 cut(s) 446
Hpy166II GTNNAC 3 cut(s) 238, 454, 494
Hpy188I TCNGA 1 cut(s) 260
Hpy8I GTNNAC 3 cut(s) 238, 454, 494
Hpy99I CGWCG 1 cut(s) 98
HpyCH4III ACNGT 2 cut(s) 220, 307
HpyCH4IV ACGT 2 cut(s) 42, 450
HpyF10VI GCNNNNNNNGC 2 cut(s) 239, 285
HpySE526I ACGT 2 cut(s) 42, 450
Hsp92II CATG 3 cut(s) 106, 179, 514
Kzo9I GATC 1 cut(s) 374
LguI GCTCTTC 1 cut(s) 422
LpnPI CCDG 9 cut(s) 24, 78, 140, 157, 167, 174, 228, 326, 422
Lsp1109I GCAGC 4 cut(s) 47, 62, 181, 272
LweI GCATC 1 cut(s) 348
MaeI CTAG 4 cut(s) 168, 276, 335, 428
MaeII ACGT 2 cut(s) 42, 450
MalI GATC 1 cut(s) 376
MboI GATC 1 cut(s) 374
MboII GAAGA 3 cut(s) 303, 409, 510
MfeI CAATTG 1 cut(s) 378
MhlI GDGCHC 2 cut(s) 240, 496
MlsI TGGCCA 1 cut(s) 32
MluCI AATT 1 cut(s) 378
MluNI TGGCCA 1 cut(s) 32
MnlI CCTC 7 cut(s) 40, 70, 258, 405, 410, 431, 434
Mox20I TGGCCA 1 cut(s) 32
Mph1103I ATGCAT 1 cut(s) 108
MroXI GAANNNNTTC 1 cut(s) 298
MscI TGGCCA 1 cut(s) 32
MseI TTAA 1 cut(s) 369
MslI CAYNNNNRTG 1 cut(s) 41
Msp20I TGGCCA 1 cut(s) 32
MspI CCGG 3 cut(s) 11, 144, 313
MspR9I CCNGG 3 cut(s) 155, 313, 314
MunI CAATTG 1 cut(s) 378
Mva1269I GAATGC 1 cut(s) 106
MvaI CCWGG 1 cut(s) 155
MwoI GCNNNNNNNGC 2 cut(s) 239, 285
NciI CCSGG 2 cut(s) 313, 314
NdeI CATATG 1 cut(s) 86
NdeII GATC 1 cut(s) 374
NlaIII CATG 3 cut(s) 106, 179, 514
NsiI ATGCAT 1 cut(s) 108
NspI RCATGY 1 cut(s) 106
OliI CACNNNNGTG 1 cut(s) 41
PaeI GCATGC 1 cut(s) 106
PciSI GCTCTTC 1 cut(s) 422
PctI GAATGC 1 cut(s) 106
PdmI GAANNNNTTC 1 cut(s) 298
PkrI GCNGC 5 cut(s) 52, 62, 196, 287, 390
PpuMI RGGWCCY 1 cut(s) 245
Psp5II RGGWCCY 1 cut(s) 245
Psp6I CCWGG 1 cut(s) 153
PspGI CCWGG 1 cut(s) 153
PspPI GGNCC 1 cut(s) 245
PspPPI RGGWCCY 1 cut(s) 245
PstI CTGCAG 1 cut(s) 290
RsaI GTAC 4 cut(s) 92, 222, 432, 486
RsaNI GTAC 4 cut(s) 91, 221, 431, 485
RseI CAYNNNNRTG 1 cut(s) 41
SapI GCTCTTC 1 cut(s) 422
SaqAI TTAA 1 cut(s) 369
SatI GCNGC 5 cut(s) 51, 61, 195, 286, 389
Sau3AI GATC 1 cut(s) 374
Sau96I GGNCC 1 cut(s) 245
ScaI AGTACT 1 cut(s) 432
ScrFI CCNGG 3 cut(s) 155, 313, 314
SduI GDGCHC 2 cut(s) 240, 496
SetI ASST 8 cut(s) 45, 81, 183, 250, 287, 453, 475, 490
SfaNI GCATC 1 cut(s) 348
SfcI CTRYAG 2 cut(s) 286, 474
SinI GGWCC 1 cut(s) 245
SmaI CCCGGG 1 cut(s) 314
SmiMI CAYNNNNRTG 1 cut(s) 41
SpeI ACTAGT 1 cut(s) 167
SphI GCATGC 1 cut(s) 106
Sse9I AATT 1 cut(s) 378
SsiI CCGC 3 cut(s) 113, 253, 389
SspMI CTAG 4 cut(s) 168, 276, 335, 428
StyD4I CCNGG 3 cut(s) 153, 311, 312
TaaI ACNGT 2 cut(s) 220, 307
TaiI ACGT 2 cut(s) 45, 453
TaqI TCGA 1 cut(s) 353
TasI AATT 1 cut(s) 378
TatI WGTACW 2 cut(s) 220, 430
TauI GCSGC 1 cut(s) 391
Tru1I TTAA 1 cut(s) 369
Tru9I TTAA 1 cut(s) 369
TscAI CASTG 2 cut(s) 193, 240
TseI GCWGC 4 cut(s) 50, 60, 194, 285
TspMI CCCGGG 1 cut(s) 312
TspRI CASTG 2 cut(s) 193, 240
VneI GTGCAC 2 cut(s) 236, 492
VpaK11BI GGWCC 1 cut(s) 245
XceI RCATGY 1 cut(s) 106
XcmI CCANNNNNNNNNTGG 1 cut(s) 40
XmaI CCCGGG 1 cut(s) 312
XmnI GAANNNNTTC 1 cut(s) 298
XspI CTAG 4 cut(s) 168, 276, 335, 428
ZrmI AGTACT 1 cut(s) 432
Zsp2I ATGCAT 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.