pycom06g13740

3-oxoacyl- acyl-carrier-protein reductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
N/A
Physical Location & Seq
Forward (+)
18623470 .. 18624727
1258 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 531 bp
ATGATTAAGATGGTGGTTGATGCGTGGGGAACGGTTGATGTCTTGGTAAATAATGCAGGAATTACACGGGATGGCTTATTGATGAGAATGAAAAAATCCCAATGGCAGGAGGTTGTTGATTTGAATCTTACAGTTGTGTTTCTATGCACACAGGCTGCGGCAAAAATTATGATGAAACTGAGAAAGGGAAGAATAATCAATGTAGCATCTGTTGTTGGTCTTGTTGGCAATGTTGGACAAGCCAACTACAGTGCTGCAAAGGCGGGAGTTATTGGTTTCACGAAGAGTGTTGCAAAGGAATATTCGAGCAGGAATATTAATGTCAATGCTGTTGCCCCTGGTTTTATCGTATCTGATATGACTTCCAAGCTCGGAGAAGACATAGAAAAGAAGATCTTGGGGAGCATTCCCTTAGGGCGATATGGTCAACCTGAAGAAGTGGCTGGACTGGTGGAATTCTTGGTGCTTAATCCCGCTGCCAGCTACATTACTGGACAAGTCTTGACCATTGATGGAGGGATGGTGATGTGA

Protein Analysis

177

Amino Acids

18.79

Weight (kDa)

9.24

Isoelectric Point (pI)

20.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short_C2 PF13561 2 - 174 4.3e-48 Enoyl-(Acyl carrier protein) reductase
adh_short PF00106 2 - 127 4e-42 short chain dehydrogenase
KR PF08659 10 - 100 1.6e-07 KR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 158, 263, 474
AcsI RAATTY 1 cut(s) 455
AcuI CTGAAG 1 cut(s) 453
AfiI CCNNNNNNNGG 1 cut(s) 106
AgsI TTSAA 1 cut(s) 124
AjnI CCWGG 1 cut(s) 337
AluBI AGCT 2 cut(s) 370, 483
AluI AGCT 2 cut(s) 370, 483
ApeKI GCWGC 3 cut(s) 155, 254, 476
ApoI RAATTY 1 cut(s) 455
AseI ATTAAT 1 cut(s) 318
AxyI CCTNAGG 1 cut(s) 412
BbsI GAAGAC 1 cut(s) 384
BbvI GCAGC 3 cut(s) 142, 241, 463
BccI CCATC 4 cut(s) 4, 65, 506, 514
BciT130I CCWGG 1 cut(s) 339
BfmI CTRYAG 1 cut(s) 247
BglII AGATCT 1 cut(s) 393
BisI GCNGC 4 cut(s) 156, 159, 255, 477
BlsI GCNGC 4 cut(s) 157, 160, 256, 478
Bme1390I CCNGG 1 cut(s) 339
BmrFI CCNGG 1 cut(s) 339
BmsI GCATC 2 cut(s) 10, 215
BpiI GAAGAC 1 cut(s) 384
BsaBI GATNNNNATC 1 cut(s) 123
BsaJI CCNNGG 1 cut(s) 337
BsaXI ACNNNNNCTCC 1 cut(s) 507
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse1I ACTGG 2 cut(s) 453, 496
Bse21I CCTNAGG 1 cut(s) 412
Bse3DI GCAATG 1 cut(s) 235
Bse8I GATNNNNATC 1 cut(s) 123
BseBI CCWGG 1 cut(s) 339
BseDI CCNNGG 1 cut(s) 337
BseGI GGATG 2 cut(s) 76, 525
BseJI GATNNNNATC 1 cut(s) 123
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMI GCAATG 1 cut(s) 235
BseMII CTCAG 1 cut(s) 170
BseNI ACTGG 2 cut(s) 453, 496
BseXI GCAGC 3 cut(s) 142, 241, 463
BslI CCNNNNNNNGG 1 cut(s) 106
BsmI GAATGC 1 cut(s) 405
Bsp143I GATC 1 cut(s) 393
BspACI CCGC 3 cut(s) 158, 263, 474
BspCNI CTCAG 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 235
BsrI ACTGG 2 cut(s) 453, 496
BssECI CCNNGG 1 cut(s) 337
BssMI GATC 1 cut(s) 393
Bst2UI CCWGG 1 cut(s) 339
Bst4CI ACNGT 3 cut(s) 34, 133, 251
Bst6I CTCTTC 1 cut(s) 278
BstC8I GCNNGC 1 cut(s) 481
BstDEI CTNAG 2 cut(s) 179, 412
BstF5I GGATG 2 cut(s) 76, 525
BstKTI GATC 1 cut(s) 396
BstMBI GATC 1 cut(s) 393
BstMWI GCNNNNNNNGC 1 cut(s) 260
BstNI CCWGG 1 cut(s) 339
BstSCI CCNGG 1 cut(s) 337
BstSFI CTRYAG 1 cut(s) 247
BstV1I GCAGC 3 cut(s) 142, 241, 463
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 1 cut(s) 393
BstYI RGATCY 1 cut(s) 393
Bsu36I CCTNAGG 1 cut(s) 412
BtsCI GGATG 2 cut(s) 76, 525
BtsIMutI CAGTG 1 cut(s) 256
Cac8I GCNNGC 1 cut(s) 481
CviJI RGCY 6 cut(s) 75, 155, 242, 370, 443, 483
CviKI_1 RGCY 6 cut(s) 75, 155, 242, 370, 443, 483
DdeI CTNAG 2 cut(s) 179, 412
DpnI GATC 1 cut(s) 395
DpnII GATC 1 cut(s) 393
Eam1104I CTCTTC 1 cut(s) 278
EarI CTCTTC 1 cut(s) 278
Eco57I CTGAAG 1 cut(s) 453
Eco81I CCTNAGG 1 cut(s) 412
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 1 cut(s) 337
FaiI YATR 5 cut(s) 145, 170, 359, 383, 423
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FauI CCCGC 2 cut(s) 256, 481
Fnu4HI GCNGC 4 cut(s) 156, 159, 255, 477
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 4 cut(s) 156, 159, 255, 477
GluI GCNGC 4 cut(s) 156, 159, 255, 477
HincII GTYRAC 1 cut(s) 428
HindII GTYRAC 1 cut(s) 428
HinfI GANTC 1 cut(s) 124
Hpy166II GTNNAC 1 cut(s) 428
Hpy188I TCNGA 2 cut(s) 355, 374
Hpy188III TCNNGA 2 cut(s) 280, 502
Hpy8I GTNNAC 1 cut(s) 428
HpyCH4III ACNGT 3 cut(s) 34, 133, 251
HpyCH4V TGCA 4 cut(s) 56, 147, 257, 293
HpyF10VI GCNNNNNNNGC 1 cut(s) 260
HpyF3I CTNAG 2 cut(s) 179, 412
Kzo9I GATC 1 cut(s) 393
LmnI GCTCC 1 cut(s) 402
Lsp1109I GCAGC 3 cut(s) 142, 241, 463
LweI GCATC 2 cut(s) 10, 215
MalI GATC 1 cut(s) 395
MboI GATC 1 cut(s) 393
MboII GAAGA 5 cut(s) 201, 295, 389, 403, 446
MflI RGATCY 1 cut(s) 393
MluCI AATT 3 cut(s) 60, 165, 455
MmeI TCCRAC 1 cut(s) 214
MnlI CCTC 2 cut(s) 103, 509
MseI TTAA 3 cut(s) 6, 318, 468
MspA1I CMGCKG 1 cut(s) 476
MspR9I CCNGG 1 cut(s) 339
Mva1269I GAATGC 1 cut(s) 405
MvaI CCWGG 1 cut(s) 339
MwoI GCNNNNNNNGC 1 cut(s) 260
NdeII GATC 1 cut(s) 393
PctI GAATGC 1 cut(s) 405
PfeI GAWTC 1 cut(s) 124
PkrI GCNGC 4 cut(s) 157, 160, 256, 478
PshBI ATTAAT 1 cut(s) 318
Psp6I CCWGG 1 cut(s) 337
PspGI CCWGG 1 cut(s) 337
PsuI RGATCY 1 cut(s) 393
SaqAI TTAA 3 cut(s) 6, 318, 468
SatI GCNGC 4 cut(s) 156, 159, 255, 477
Sau3AI GATC 1 cut(s) 393
ScrFI CCNGG 1 cut(s) 339
SetI ASST 4 cut(s) 114, 372, 433, 485
SfaNI GCATC 2 cut(s) 10, 215
SfcI CTRYAG 1 cut(s) 247
Sse9I AATT 3 cut(s) 60, 165, 455
SsiI CCGC 3 cut(s) 158, 263, 474
SspI AATATT 2 cut(s) 302, 316
StyD4I CCNGG 1 cut(s) 337
TaaI ACNGT 3 cut(s) 34, 133, 251
TaqI TCGA 1 cut(s) 305
TasI AATT 3 cut(s) 60, 165, 455
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 1 cut(s) 124
Tru1I TTAA 3 cut(s) 6, 318, 468
Tru9I TTAA 3 cut(s) 6, 318, 468
TscAI CASTG 1 cut(s) 256
TseI GCWGC 3 cut(s) 155, 254, 476
TspDTI ATGAA 2 cut(s) 104, 188
TspRI CASTG 1 cut(s) 256
VspI ATTAAT 1 cut(s) 318
XapI RAATTY 1 cut(s) 455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.