pycom06g15210

Belongs to the GDA1 CD39 NTPase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
N/A
Physical Location & Seq
Reverse (-)
19793215 .. 19794033
819 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 819 bp
ATGCACTTTGACTCGACTCATTCAGTTAAACAAAGTCTTTCCTTTGTCGAAAAGTCACATACTTTCGCGGAGAAATATATCTCAGAAAAAATTTTCGTTCATTTGGGTGAAAGGCGGGTCTCAGTTTGGCTGTTTGCATGCCCAAGTTCGAATTCCCCTTTTTTCGTTCATTACATCGTTATAACTCTATTTGCATTACTCTGTTTACTTTCTTTTTCCTTCTCATTGAAGTTGATTTTGAGGATTCATATCACAGTTGTAATTGATTCCCTGCTCATTGTCACAGGCAGTGAAATGGTCAATTTGACAGCCGTTGTTCACCCCACAGCTCGCTTTCACGCCTTATCTGGATTTTTCGCTGTTTATGACAAGTTGAATTTGAGTGGCCGAGCCACCTTGCCCAAGATATGGGAGAAAGGCCAGCAACTATGCTCCAAATCACGGTCTGACCAAACCAGCATCTCACAAAATGGTTATTTTGCTTGGCAATATTGTTTTCGGGTACCTTACATGGCATCACTCGTTGAGGATGCTCTGTGTCTTGGTGACAAAACAATCGTTTTTGGTCCTCCAGACGTTACTTGGACATTAGGAGCTGCCCTGGTCGAAGGAGAGTATTTATGGTCGAGTACAATTCGATCTCGGACTAGCATTTTGACCCTAAACATGGAGGTTGCATCCTCTCCCATTTTTGTACTTGTTTTACTTCTTTTTCTTCTGTTGGTTGTGTATTGTAGTCAAGTCAAGCTGCCCATGATCGGCAAGAAGGGTGCAGCTAGGGCATCTTTGCCAGTAAGAGAACAGAAGATGATGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0003006 GO:0003674 GO:0003824 GO:0004382 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006152 GO:0006163 GO:0006195 GO:0006213 GO:0006220 GO:0006244 GO:0006256 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007548 GO:0008150 GO:0008152 GO:0008406 GO:0009056 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009125 GO:0009126 GO:0009128 GO:0009132 GO:0009134 GO:0009135 GO:0009137 GO:0009138 GO:0009140 GO:0009150 GO:0009154 GO:0009158 GO:0009161 GO:0009164 GO:0009166 GO:0009167 GO:0009169 GO:0009179 GO:0009181 GO:0009185 GO:0009191 GO:0009193 GO:0009195 GO:0009218 GO:0009222 GO:0009259 GO:0009261 GO:0009653 GO:0009887 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010559 GO:0010560 GO:0010604 GO:0012505 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017110 GO:0018130 GO:0019222 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0022414 GO:0030173 GO:0030334 GO:0031090 GO:0031224 GO:0031228 GO:0031300 GO:0031301 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0031984 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032879 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0034656 GO:0035262 GO:0040012 GO:0042278 GO:0042454 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043262 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045134 GO:0045137 GO:0046031 GO:0046032 GO:0046048 GO:0046128 GO:0046130 GO:0046131 GO:0046133 GO:0046135 GO:0046434 GO:0046483 GO:0046700 GO:0046710 GO:0046712 GO:0048513 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051270 GO:0055086 GO:0060049 GO:0060050 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0072521 GO:0072523 GO:0072527 GO:0072529 GO:0080090 GO:0098588 GO:0098791 GO:1901068 GO:1901069 GO:1901135 GO:1901136 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901657 GO:1901658 GO:1903018 GO:1903020 GO:2000112 GO:2000145
Pfam Domains
Protein Families

Protein Analysis

273

Amino Acids

30.53

Weight (kDa)

9.0

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 182
Acc65I GGTACC 1 cut(s) 502
AccB1I GGYRCC 1 cut(s) 502
AccB7I CCANNNNNTGG 1 cut(s) 408
AccII CGCG 1 cut(s) 68
AciI CCGC 2 cut(s) 68, 115
AcoI YGGCCR 1 cut(s) 385
AcsI RAATTY 3 cut(s) 90, 151, 376
AfaI GTAC 3 cut(s) 504, 631, 696
AfiI CCNNNNNNNGG 4 cut(s) 408, 441, 667, 758
AgsI TTSAA 2 cut(s) 229, 376
AjnI CCWGG 1 cut(s) 600
AjuI GAANNNNNNNTTGG 2 cut(s) 136, 168
AluBI AGCT 4 cut(s) 329, 596, 748, 776
AluI AGCT 4 cut(s) 329, 596, 748, 776
Alw26I GTCTC 1 cut(s) 124
AoxI GGCC 2 cut(s) 385, 418
ApeKI GCWGC 3 cut(s) 596, 748, 773
ApoI RAATTY 3 cut(s) 90, 151, 376
ArsI GACNNNNNNTTYG 2 cut(s) 637, 669
Asp718I GGTACC 1 cut(s) 502
AspS9I GGNCC 1 cut(s) 566
AsuHPI GGTGA 3 cut(s) 119, 311, 557
AsuII TTCGAA 1 cut(s) 149
AvaII GGWCC 1 cut(s) 566
BanI GGYRCC 1 cut(s) 502
BbvI GCAGC 3 cut(s) 583, 735, 785
BccI CCATC 1 cut(s) 805
BceAI ACGGC 1 cut(s) 296
BciT130I CCWGG 1 cut(s) 602
BcoDI GTCTC 1 cut(s) 124
BfaI CTAG 2 cut(s) 648, 777
BisI GCNGC 3 cut(s) 597, 749, 774
BlsI GCNGC 3 cut(s) 598, 750, 775
Bme1390I CCNGG 1 cut(s) 602
Bme18I GGWCC 1 cut(s) 566
BmgT120I GGNCC 1 cut(s) 566
BmiI GGNNCC 1 cut(s) 504
BmrFI CCNGG 1 cut(s) 602
BmsI GCATC 5 cut(s) 468, 520, 524, 686, 791
BpmI CTGGAG 1 cut(s) 555
Bpu14I TTCGAA 1 cut(s) 149
BsaBI GATNNNNATC 1 cut(s) 248
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 1 cut(s) 600
Bsc4I CCNNNNNNNGG 4 cut(s) 408, 441, 667, 758
Bse1I ACTGG 1 cut(s) 791
Bse8I GATNNNNATC 1 cut(s) 248
BseBI CCWGG 1 cut(s) 602
BseDI CCNNGG 1 cut(s) 600
BseGI GGATG 2 cut(s) 535, 677
BseJI GATNNNNATC 1 cut(s) 248
BseLI CCNNNNNNNGG 4 cut(s) 408, 441, 667, 758
BseMII CTCAG 2 cut(s) 96, 135
BseNI ACTGG 1 cut(s) 791
BseXI GCAGC 3 cut(s) 583, 735, 785
BsgI GTGCAG 1 cut(s) 792
Bsh1236I CGCG 1 cut(s) 68
BshFI GGCC 2 cut(s) 387, 420
BshNI GGYRCC 1 cut(s) 502
BslI CCNNNNNNNGG 4 cut(s) 408, 441, 667, 758
BsmAI GTCTC 1 cut(s) 124
BsnI GGCC 2 cut(s) 387, 420
Bso31I GGTCTC 1 cut(s) 124
Bsp119I TTCGAA 1 cut(s) 149
Bsp143I GATC 2 cut(s) 638, 756
BspACI CCGC 2 cut(s) 68, 115
BspANI GGCC 2 cut(s) 387, 420
BspCNI CTCAG 2 cut(s) 95, 134
BspFNI CGCG 1 cut(s) 68
BspLI GGNNCC 1 cut(s) 504
BspT104I TTCGAA 1 cut(s) 149
BspT107I GGYRCC 1 cut(s) 502
BspTNI GGTCTC 1 cut(s) 124
BsrI ACTGG 1 cut(s) 791
BssECI CCNNGG 1 cut(s) 600
BssMI GATC 2 cut(s) 638, 756
Bst2UI CCWGG 1 cut(s) 602
Bst4CI ACNGT 2 cut(s) 256, 444
BstBI TTCGAA 1 cut(s) 149
BstC8I GCNNGC 3 cut(s) 139, 331, 422
BstDEI CTNAG 2 cut(s) 82, 121
BstF5I GGATG 2 cut(s) 535, 677
BstFNI CGCG 1 cut(s) 68
BstKTI GATC 2 cut(s) 641, 759
BstMAI GTCTC 1 cut(s) 124
BstMBI GATC 2 cut(s) 638, 756
BstMWI GCNNNNNNNGC 1 cut(s) 779
BstNI CCWGG 1 cut(s) 602
BstNSI RCATGY 1 cut(s) 141
BstSCI CCNGG 1 cut(s) 600
BstUI CGCG 1 cut(s) 68
BstV1I GCAGC 3 cut(s) 583, 735, 785
BsuRI GGCC 2 cut(s) 387, 420
BtsCI GGATG 2 cut(s) 535, 677
BtsI GCAGTG 1 cut(s) 295
BtsIMutI CAGTG 1 cut(s) 295
Cac8I GCNNGC 3 cut(s) 139, 331, 422
Cfr13I GGNCC 1 cut(s) 566
Csp6I GTAC 3 cut(s) 503, 630, 695
CviAII CATG 4 cut(s) 138, 511, 667, 754
CviJI RGCY 9 cut(s) 130, 311, 329, 387, 392, 420, 596, 748, 776
CviKI_1 RGCY 9 cut(s) 130, 311, 329, 387, 392, 420, 596, 748, 776
CviQI GTAC 3 cut(s) 503, 630, 695
DdeI CTNAG 2 cut(s) 82, 121
DpnI GATC 2 cut(s) 640, 758
DpnII GATC 2 cut(s) 638, 756
EaeI YGGCCR 1 cut(s) 385
Eco31I GGTCTC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 566
EcoRI GAATTC 1 cut(s) 151
EcoRII CCWGG 1 cut(s) 600
FaeI CATG 4 cut(s) 141, 514, 670, 757
FatI CATG 4 cut(s) 137, 510, 666, 753
FauI CCCGC 1 cut(s) 108
Fnu4HI GCNGC 3 cut(s) 597, 749, 774
FokI GGATG 2 cut(s) 542, 664
Fsp4HI GCNGC 3 cut(s) 597, 749, 774
FspBI CTAG 2 cut(s) 648, 777
GluI GCNGC 3 cut(s) 597, 749, 774
GsuI CTGGAG 1 cut(s) 555
HaeIII GGCC 2 cut(s) 387, 420
Hin1II CATG 4 cut(s) 141, 514, 670, 757
HinfI GANTC 4 cut(s) 11, 16, 244, 266
HphI GGTGA 3 cut(s) 119, 311, 557
Hpy166II GTNNAC 2 cut(s) 206, 319
Hpy188I TCNGA 3 cut(s) 85, 448, 645
Hpy188III TCNNGA 2 cut(s) 348, 572
Hpy8I GTNNAC 2 cut(s) 206, 319
HpyAV CCTTC 3 cut(s) 229, 602, 760
HpyCH4III ACNGT 2 cut(s) 256, 444
HpyCH4IV ACGT 1 cut(s) 576
HpyCH4V TGCA 5 cut(s) 4, 137, 194, 677, 773
HpyF10VI GCNNNNNNNGC 1 cut(s) 779
HpyF3I CTNAG 2 cut(s) 82, 121
HpySE526I ACGT 1 cut(s) 576
Hsp92II CATG 4 cut(s) 141, 514, 670, 757
KpnI GGTACC 1 cut(s) 506
Kzo9I GATC 2 cut(s) 638, 756
LmnI GCTCC 2 cut(s) 437, 593
LpnPI CCDG 9 cut(s) 270, 284, 333, 434, 469, 585, 587, 614, 804
Lsp1109I GCAGC 3 cut(s) 583, 735, 785
LweI GCATC 5 cut(s) 468, 520, 524, 686, 791
MaeI CTAG 2 cut(s) 648, 777
MaeII ACGT 1 cut(s) 576
MaeIII GTNAC 4 cut(s) 54, 280, 545, 577
MalI GATC 2 cut(s) 640, 758
MboI GATC 2 cut(s) 638, 756
MboII GAAGA 2 cut(s) 707, 817
MluCI AATT 6 cut(s) 90, 151, 261, 301, 376, 633
MlyI GAGTC 2 cut(s) 5, 10
MnlI CCTC 5 cut(s) 234, 520, 579, 664, 691
MseI TTAA 1 cut(s) 27
MslI CAYNNNNRTG 1 cut(s) 105
MspR9I CCNGG 1 cut(s) 602
MvaI CCWGG 1 cut(s) 602
MvnI CGCG 1 cut(s) 68
MwoI GCNNNNNNNGC 1 cut(s) 779
NdeII GATC 2 cut(s) 638, 756
NlaIII CATG 4 cut(s) 141, 514, 670, 757
NlaIV GGNNCC 1 cut(s) 504
NmeAIII GCCGAG 1 cut(s) 413
NmuCI GTSAC 3 cut(s) 54, 280, 545
NspI RCATGY 1 cut(s) 141
NspV TTCGAA 1 cut(s) 149
PaeI GCATGC 1 cut(s) 141
PfeI GAWTC 2 cut(s) 244, 266
PflMI CCANNNNNTGG 1 cut(s) 408
PkrI GCNGC 3 cut(s) 598, 750, 775
PleI GAGTC 2 cut(s) 5, 10
PpsI GAGTC 2 cut(s) 5, 10
PsiI TTATAA 1 cut(s) 182
Psp6I CCWGG 1 cut(s) 600
PspGI CCWGG 1 cut(s) 600
PspN4I GGNNCC 1 cut(s) 504
PspPI GGNCC 1 cut(s) 566
RsaI GTAC 3 cut(s) 504, 631, 696
RsaNI GTAC 3 cut(s) 503, 630, 695
RseI CAYNNNNRTG 1 cut(s) 105
SaqAI TTAA 1 cut(s) 27
SatI GCNGC 3 cut(s) 597, 749, 774
Sau3AI GATC 2 cut(s) 638, 756
Sau96I GGNCC 1 cut(s) 566
SchI GAGTC 2 cut(s) 5, 10
ScrFI CCNGG 1 cut(s) 602
SetI ASST 8 cut(s) 331, 398, 508, 579, 598, 675, 750, 778
SfaNI GCATC 5 cut(s) 468, 520, 524, 686, 791
SfuI TTCGAA 1 cut(s) 149
SinI GGWCC 1 cut(s) 566
SmiMI CAYNNNNRTG 1 cut(s) 105
SphI GCATGC 1 cut(s) 141
Sse9I AATT 6 cut(s) 90, 151, 261, 301, 376, 633
SsiI CCGC 2 cut(s) 68, 115
SspI AATATT 1 cut(s) 491
SspMI CTAG 2 cut(s) 648, 777
StyD4I CCNGG 1 cut(s) 600
TaaI ACNGT 2 cut(s) 256, 444
TaiI ACGT 1 cut(s) 579
TaqI TCGA 6 cut(s) 14, 48, 149, 606, 626, 637
TasI AATT 6 cut(s) 90, 151, 261, 301, 376, 633
TatI WGTACW 2 cut(s) 629, 694
TfiI GAWTC 2 cut(s) 244, 266
Tru1I TTAA 1 cut(s) 27
Tru9I TTAA 1 cut(s) 27
TscAI CASTG 1 cut(s) 295
TseFI GTSAC 3 cut(s) 54, 280, 545
TseI GCWGC 3 cut(s) 596, 748, 773
Tsp45I GTSAC 3 cut(s) 54, 280, 545
TspDTI ATGAA 3 cut(s) 89, 158, 236
TspRI CASTG 1 cut(s) 295
Van91I CCANNNNNTGG 1 cut(s) 408
VpaK11BI GGWCC 1 cut(s) 566
XapI RAATTY 3 cut(s) 90, 151, 376
XceI RCATGY 1 cut(s) 141
XcmI CCANNNNNNNNNTGG 1 cut(s) 579
XspI CTAG 2 cut(s) 648, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.