pycom06g17600

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
N/A
Physical Location & Seq
Reverse (-)
21523482 .. 21524506
1025 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 420 bp
ATGGAACTAGTGGATGTGGCGAAGGAAATCTACCTCAGTGGAAAATCTCTTGACATATCTGAGGGCTTGTCCAAAGTCATTTCCAAACACGAAAACTTGCACCTTCGTCCCGAGATAGAGGCACTCCAAGAAGATGGGAAGGTATTATTTTTGGATGGTTCTTGGGTCATTGCAGACACTATCATATACTGCACTGGGTATTCATACACATTCCCCTTTCTTGACACCAAAGGAATAGTAACTGTGGATGATGACAGAGTGAGCCCTTTGTATGAGCACACCTTCCCTCCATCACTTGCTCCCTCTTTATCTTTTATAGGCATTCCTAGAAAGATAATAGGGTTCCCTTTCTTTGAGTCACAAGCAAAATGGATAGCTCAACTGCTCTCTGGGAAAATCAACATTGCCATCAAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

140

Amino Acids

15.47

Weight (kDa)

5.11

Isoelectric Point (pI)

33.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 33 - 135 1.9e-12 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AhlI ACTAGT 1 cut(s) 7
AluBI AGCT 1 cut(s) 377
AluI AGCT 1 cut(s) 377
Alw21I GWGCWC 1 cut(s) 279
Ama87I CYCGRG 1 cut(s) 110
AvaI CYCGRG 1 cut(s) 110
BanII GRGCYC 1 cut(s) 266
BarI GAAGNNNNNNTAC 2 cut(s) 14, 46
Bbv12I GWGCWC 1 cut(s) 279
BccI CCATC 4 cut(s) 128, 149, 298, 416
BcuI ACTAGT 1 cut(s) 7
BfaI CTAG 2 cut(s) 8, 327
BmeT110I CYCGRG 1 cut(s) 110
BmiI GGNNCC 1 cut(s) 344
BmrI ACTGGG 1 cut(s) 204
BmuI ACTGGG 1 cut(s) 204
BsaXI ACNNNNNCTCC 2 cut(s) 271, 301
Bse1I ACTGG 1 cut(s) 199
Bse3DI GCAATG 2 cut(s) 168, 402
BseGI GGATG 3 cut(s) 19, 160, 253
BseMI GCAATG 2 cut(s) 168, 402
BseMII CTCAG 2 cut(s) 49, 51
BseNI ACTGG 1 cut(s) 199
BsgI GTGCAG 1 cut(s) 175
BsiHKAI GWGCWC 1 cut(s) 279
BsiHKCI CYCGRG 1 cut(s) 110
BslFI GGGAC 1 cut(s) 93
BsmFI GGGAC 1 cut(s) 93
BsmI GAATGC 1 cut(s) 321
BsoBI CYCGRG 1 cut(s) 110
Bsp1286I GDGCHC 2 cut(s) 266, 279
BspCNI CTCAG 2 cut(s) 48, 52
BspLI GGNNCC 1 cut(s) 344
BsrDI GCAATG 2 cut(s) 168, 402
BsrI ACTGG 1 cut(s) 199
Bst4CI ACNGT 1 cut(s) 244
BstDEI CTNAG 2 cut(s) 35, 60
BstF5I GGATG 3 cut(s) 19, 160, 253
BstXI CCANNNNNNTGG 1 cut(s) 134
BtsCI GGATG 3 cut(s) 19, 160, 253
BtsIMutI CAGTG 2 cut(s) 43, 192
CviJI RGCY 3 cut(s) 66, 264, 377
CviKI_1 RGCY 3 cut(s) 66, 264, 377
DdeI CTNAG 2 cut(s) 35, 60
Eco24I GRGCYC 1 cut(s) 266
Eco88I CYCGRG 1 cut(s) 110
EcoT38I GRGCYC 1 cut(s) 266
FaiI YATR 6 cut(s) 56, 185, 187, 205, 273, 317
FaqI GGGAC 1 cut(s) 93
FokI GGATG 3 cut(s) 26, 167, 260
FriOI GRGCYC 1 cut(s) 266
FspBI CTAG 2 cut(s) 8, 327
HinfI GANTC 1 cut(s) 356
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 3 cut(s) 50, 110, 221
HpyAV CCTTC 4 cut(s) 16, 113, 133, 292
HpyCH4III ACNGT 1 cut(s) 244
HpyCH4V TGCA 3 cut(s) 100, 173, 192
HpyF3I CTNAG 2 cut(s) 35, 60
LmnI GCTCC 1 cut(s) 304
LpnPI CCDG 2 cut(s) 180, 375
MaeI CTAG 2 cut(s) 8, 327
MaeIII GTNAC 2 cut(s) 238, 357
MboII GAAGA 1 cut(s) 143
MhlI GDGCHC 2 cut(s) 266, 279
MlyI GAGTC 1 cut(s) 365
MnlI CCTC 5 cut(s) 44, 55, 112, 297, 313
Mva1269I GAATGC 1 cut(s) 321
NlaIV GGNNCC 1 cut(s) 344
NmuCI GTSAC 1 cut(s) 357
PctI GAATGC 1 cut(s) 321
PleI GAGTC 1 cut(s) 364
PpsI GAGTC 1 cut(s) 364
PspN4I GGNNCC 1 cut(s) 344
SchI GAGTC 1 cut(s) 365
SduI GDGCHC 2 cut(s) 266, 279
SetI ASST 5 cut(s) 36, 105, 144, 284, 379
SpeI ACTAGT 1 cut(s) 7
SspMI CTAG 2 cut(s) 8, 327
TaaI ACNGT 1 cut(s) 244
TscAI CASTG 2 cut(s) 43, 199
TseFI GTSAC 1 cut(s) 357
Tsp45I GTSAC 1 cut(s) 357
TspDTI ATGAA 1 cut(s) 192
TspRI CASTG 2 cut(s) 43, 199
XspI CTAG 2 cut(s) 8, 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.