pycom06g17900

magnesium ion export from mitochondrion

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
N/A
Physical Location & Seq
Reverse (-)
21803195 .. 21803874
680 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 270 bp
ATGTCCATGGCGACACAGAGCTCGAATTCTAGCGAACGGCATGCCCTACCGGATACGACTCACAAACACTTCTTCGAAATAATTCAACCAGCGACGGAAATCAAAGTTAAGAGGGAGTTTCTGTGGGGTGCTGTTGCTGGAGCATTTGGGGAAGGAATGACGCATCCGGTCGATGCCGTAAAAACACGCATTCAGAAAATAAACTTTAAAGTTTTGGGTTGGGCATTTTATTTTCGTGCTAAAATGTTTCATAGAAACCAAAGAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.24

Weight (kDa)

10.2

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 25
AgsI TTSAA 1 cut(s) 86
AluBI AGCT 1 cut(s) 21
AluI AGCT 1 cut(s) 21
Alw21I GWGCWC 1 cut(s) 23
ApoI RAATTY 1 cut(s) 25
Asp700I GAANNNNTTC 1 cut(s) 81
AsuII TTCGAA 1 cut(s) 75
BanII GRGCYC 1 cut(s) 23
Bbv12I GWGCWC 1 cut(s) 23
BceAI ACGGC 2 cut(s) 53, 161
BcgI CGANNNNNNTGC 2 cut(s) 23, 57
BciVI GTATCC 1 cut(s) 46
BfaI CTAG 1 cut(s) 30
BfuI GTATCC 1 cut(s) 46
BmsI GCATC 2 cut(s) 163, 172
BpmI CTGGAG 1 cut(s) 159
Bpu14I TTCGAA 1 cut(s) 75
BsaJI CCNNGG 1 cut(s) 6
BsaWI WCCGGW 2 cut(s) 49, 166
BsaXI ACNNNNNCTCC 2 cut(s) 107, 137
BseDI CCNNGG 1 cut(s) 6
BseGI GGATG 1 cut(s) 163
Bsh1285I CGRYCG 1 cut(s) 171
BsiEI CGRYCG 1 cut(s) 171
BsiHKAI GWGCWC 1 cut(s) 23
BsiSI CCGG 2 cut(s) 50, 167
BsmI GAATGC 1 cut(s) 189
Bsp119I TTCGAA 1 cut(s) 75
Bsp1286I GDGCHC 1 cut(s) 23
Bsp19I CCATGG 1 cut(s) 6
BspT104I TTCGAA 1 cut(s) 75
BssECI CCNNGG 1 cut(s) 6
BssT1I CCWWGG 1 cut(s) 6
BstBI TTCGAA 1 cut(s) 75
BstC8I GCNNGC 1 cut(s) 42
BstDSI CCRYGG 1 cut(s) 6
BstF5I GGATG 1 cut(s) 163
BstMCI CGRYCG 1 cut(s) 171
BstNSI RCATGY 1 cut(s) 44
BsuI GTATCC 1 cut(s) 46
BtgI CCRYGG 1 cut(s) 6
BtsCI GGATG 1 cut(s) 163
Cac8I GCNNGC 1 cut(s) 42
CseI GACGC 1 cut(s) 169
CviAII CATG 2 cut(s) 7, 41
CviJI RGCY 1 cut(s) 21
CviKI_1 RGCY 1 cut(s) 21
DraI TTTAAA 1 cut(s) 208
Ecl136II GAGCTC 1 cut(s) 21
Eco130I CCWWGG 1 cut(s) 6
Eco24I GRGCYC 1 cut(s) 23
Eco53kI GAGCTC 1 cut(s) 21
EcoICRI GAGCTC 1 cut(s) 21
EcoRI GAATTC 1 cut(s) 25
EcoT14I CCWWGG 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 23
ErhI CCWWGG 1 cut(s) 6
FaeI CATG 2 cut(s) 10, 44
FaiI YATR 4 cut(s) 8, 42, 252, 268
FatI CATG 2 cut(s) 6, 40
FokI GGATG 1 cut(s) 150
FriOI GRGCYC 1 cut(s) 23
FspBI CTAG 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 159
HapII CCGG 2 cut(s) 50, 167
HgaI GACGC 1 cut(s) 169
Hin1II CATG 2 cut(s) 10, 44
HinfI GANTC 1 cut(s) 58
HpaII CCGG 2 cut(s) 50, 167
Hpy188I TCNGA 1 cut(s) 195
Hpy99I CGWCG 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 146
Hsp92II CATG 2 cut(s) 10, 44
LmnI GCTCC 1 cut(s) 140
LpnPI CCDG 4 cut(s) 63, 102, 123, 180
LweI GCATC 2 cut(s) 163, 172
MaeI CTAG 1 cut(s) 30
MboII GAAGA 1 cut(s) 64
MhlI GDGCHC 1 cut(s) 23
MluCI AATT 2 cut(s) 25, 81
MlyI GAGTC 1 cut(s) 52
MnlI CCTC 1 cut(s) 105
MroXI GAANNNNTTC 1 cut(s) 81
MseI TTAA 2 cut(s) 108, 207
MspI CCGG 2 cut(s) 50, 167
Mva1269I GAATGC 1 cut(s) 189
NcoI CCATGG 1 cut(s) 6
NlaIII CATG 2 cut(s) 10, 44
NspI RCATGY 1 cut(s) 44
NspV TTCGAA 1 cut(s) 75
PaeI GCATGC 1 cut(s) 44
PctI GAATGC 1 cut(s) 189
PdmI GAANNNNTTC 1 cut(s) 81
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
Psp124BI GAGCTC 1 cut(s) 23
SacI GAGCTC 1 cut(s) 23
SaqAI TTAA 2 cut(s) 108, 207
SchI GAGTC 1 cut(s) 52
SduI GDGCHC 1 cut(s) 23
SetI ASST 1 cut(s) 23
SfaNI GCATC 2 cut(s) 163, 172
SfuI TTCGAA 1 cut(s) 75
SphI GCATGC 1 cut(s) 44
Sse9I AATT 2 cut(s) 25, 81
SspMI CTAG 1 cut(s) 30
SstI GAGCTC 1 cut(s) 23
StyI CCWWGG 1 cut(s) 6
TaqI TCGA 3 cut(s) 23, 75, 171
TasI AATT 2 cut(s) 25, 81
Tru1I TTAA 2 cut(s) 108, 207
Tru9I TTAA 2 cut(s) 108, 207
TspDTI ATGAA 1 cut(s) 239
TspGWI ACGGA 1 cut(s) 110
XapI RAATTY 1 cut(s) 25
XceI RCATGY 1 cut(s) 44
XmnI GAANNNNTTC 1 cut(s) 81
XspI CTAG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.