pycom06g20980

Protein kinase domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
N/A
Physical Location & Seq
Forward (+)
23823239 .. 23823484
246 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
ATGGATGAAGAGGAGCTTAATTTAATGCGTTCAGAACCTGTCTGGCAGGGCTTTGTCACTCAGACCAATGAACTCATCATGTTAGGGGATGGGAAAGTTGTGAATGAGAATGGAAGGCCACGTCTGGAAGAGGTTTGTGTGGATGACGACCAGCTTGGTTCAGTAAGATCAATCTCTCACTCTGTACAGGTGTGGGAATCAATAGCGAAGCTGCTGATATCGGCAGTGAAGTACGGGAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

82

Amino Acids

9.12

Weight (kDa)

4.58

Isoelectric Point (pI)

26.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 186, 233
AjiI CACGTC 1 cut(s) 122
AluBI AGCT 3 cut(s) 16, 154, 211
AluI AGCT 3 cut(s) 16, 154, 211
AlwNI CAGNNNCTG 1 cut(s) 38
AoxI GGCC 1 cut(s) 116
ApeKI GCWGC 1 cut(s) 211
BbvI GCAGC 1 cut(s) 198
BccI CCATC 1 cut(s) 83
BisI GCNGC 1 cut(s) 212
BlsI GCNGC 1 cut(s) 213
BmgBI CACGTC 1 cut(s) 122
BseGI GGATG 3 cut(s) 10, 94, 148
BseMII CTCAG 1 cut(s) 74
BseRI GAGGAG 1 cut(s) 26
BseXI GCAGC 1 cut(s) 198
BshFI GGCC 1 cut(s) 118
BsnI GGCC 1 cut(s) 118
Bsp1407I TGTACA 1 cut(s) 184
Bsp143I GATC 1 cut(s) 167
BspANI GGCC 1 cut(s) 118
BspCNI CTCAG 1 cut(s) 73
BsrGI TGTACA 1 cut(s) 184
BssMI GATC 1 cut(s) 167
Bst6I CTCTTC 2 cut(s) 3, 123
BstAUI TGTACA 1 cut(s) 184
BstDEI CTNAG 1 cut(s) 60
BstF5I GGATG 3 cut(s) 10, 94, 148
BstKTI GATC 1 cut(s) 170
BstMBI GATC 1 cut(s) 167
BstV1I GCAGC 1 cut(s) 198
BsuRI GGCC 1 cut(s) 118
BtrI CACGTC 1 cut(s) 122
BtsCI GGATG 3 cut(s) 10, 94, 148
BtsI GCAGTG 1 cut(s) 231
BtsIMutI CAGTG 1 cut(s) 231
CaiI CAGNNNCTG 1 cut(s) 38
Csp6I GTAC 2 cut(s) 185, 232
CviAII CATG 1 cut(s) 79
CviJI RGCY 5 cut(s) 16, 51, 118, 154, 211
CviKI_1 RGCY 5 cut(s) 16, 51, 118, 154, 211
CviQI GTAC 2 cut(s) 185, 232
DdeI CTNAG 1 cut(s) 60
DpnI GATC 1 cut(s) 169
DpnII GATC 1 cut(s) 167
Eam1104I CTCTTC 2 cut(s) 3, 123
EarI CTCTTC 2 cut(s) 3, 123
Eco32I GATATC 1 cut(s) 219
EcoRV GATATC 1 cut(s) 219
FaeI CATG 1 cut(s) 82
FaiI YATR 1 cut(s) 80
FalI AAGNNNNNCTT 1 cut(s) 32
FatI CATG 1 cut(s) 78
Fnu4HI GCNGC 1 cut(s) 212
FokI GGATG 3 cut(s) 17, 101, 155
Fsp4HI GCNGC 1 cut(s) 212
GluI GCNGC 1 cut(s) 212
HaeIII GGCC 1 cut(s) 118
Hin1II CATG 1 cut(s) 82
HinfI GANTC 1 cut(s) 197
Hpy188I TCNGA 2 cut(s) 34, 63
Hpy188III TCNNGA 1 cut(s) 125
HpyAV CCTTC 1 cut(s) 108
HpyCH4IV ACGT 1 cut(s) 121
HpyF3I CTNAG 1 cut(s) 60
HpySE526I ACGT 1 cut(s) 121
Hsp92II CATG 1 cut(s) 82
Kzo9I GATC 1 cut(s) 167
LmnI GCTCC 1 cut(s) 13
LpnPI CCDG 6 cut(s) 28, 32, 51, 110, 164, 173
Lsp1109I GCAGC 1 cut(s) 198
MaeII ACGT 1 cut(s) 121
MaeIII GTNAC 1 cut(s) 55
MalI GATC 1 cut(s) 169
MboI GATC 1 cut(s) 167
MboII GAAGA 2 cut(s) 20, 140
MluCI AATT 1 cut(s) 19
MnlI CCTC 2 cut(s) 4, 124
MseI TTAA 2 cut(s) 18, 23
NdeII GATC 1 cut(s) 167
NlaIII CATG 1 cut(s) 82
NmuCI GTSAC 1 cut(s) 55
PfeI GAWTC 1 cut(s) 197
PkrI GCNGC 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 38
RsaI GTAC 2 cut(s) 186, 233
RsaNI GTAC 2 cut(s) 185, 232
SaqAI TTAA 2 cut(s) 18, 23
SatI GCNGC 1 cut(s) 212
Sau3AI GATC 1 cut(s) 167
SetI ASST 7 cut(s) 18, 40, 124, 135, 156, 192, 213
SgeI CNNG 9 cut(s) 50, 55, 59, 91, 132, 137, 163, 167, 200
Sse9I AATT 1 cut(s) 19
TaiI ACGT 1 cut(s) 124
TasI AATT 1 cut(s) 19
TatI WGTACW 1 cut(s) 184
TfiI GAWTC 1 cut(s) 197
Tru1I TTAA 2 cut(s) 18, 23
Tru9I TTAA 2 cut(s) 18, 23
TscAI CASTG 1 cut(s) 231
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 1 cut(s) 211
Tsp45I GTSAC 1 cut(s) 55
TspDTI ATGAA 2 cut(s) 21, 84
TspRI CASTG 1 cut(s) 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.