pycom07g00810

Tubulin-folding cofactor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
691448 .. 692213
766 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 354 bp
ATGAAAAAAGTCGATTTTTCAAAGTTGGGTTTTGCAGCTTCTTGTTTTTGTGTTTACCAAACACAAAAACAGCTCCCAGATTTTTTTTATAGCAGCTTTTTTCACAATCACCTCAGTATCAAACCAGGCTTATTGCTACCTTTGCTTACCTCTTTCTTATACATTTTCTTCTTCAGCTTTGTTGAATGGACACACGAAGTCCTCTCTTTTCTGACAGATGATGCCATCAATCATTTCCGGTTACTTGGAGCTACAGTAGCACTGGCTGCTATTTCAAGGGGAAAACAAGCTCTTTGGGAGAGAACAGAGCTTTGTCTGAATCTGAAAAAACTGGTCGATGCAATTATGCTTTAA

Protein Analysis

118

Amino Acids

13.47

Weight (kDa)

8.49

Isoelectric Point (pI)

17.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 157
AgsI TTSAA 3 cut(s) 21, 185, 276
AjnI CCWGG 1 cut(s) 124
AluBI AGCT 7 cut(s) 38, 73, 96, 177, 251, 290, 310
AluI AGCT 7 cut(s) 38, 73, 96, 177, 251, 290, 310
ApeKI GCWGC 3 cut(s) 35, 93, 266
AsuHPI GGTGA 1 cut(s) 101
BaeI ACNNNNGTAYC 2 cut(s) 100, 133
BbvI GCAGC 3 cut(s) 47, 105, 253
BccI CCATC 1 cut(s) 233
BciT130I CCWGG 1 cut(s) 126
BfmI CTRYAG 1 cut(s) 252
BisI GCNGC 3 cut(s) 36, 94, 267
BlsI GCNGC 3 cut(s) 37, 95, 268
Bme1390I CCNGG 1 cut(s) 126
BmrFI CCNGG 1 cut(s) 126
BmsI GCATC 2 cut(s) 211, 328
BsaWI WCCGGW 1 cut(s) 237
BsaXI ACNNNNNCTCC 2 cut(s) 240, 270
Bse1I ACTGG 2 cut(s) 267, 336
BseBI CCWGG 1 cut(s) 126
BseMII CTCAG 1 cut(s) 127
BseNI ACTGG 2 cut(s) 267, 336
BseXI GCAGC 3 cut(s) 47, 105, 253
BsiSI CCGG 1 cut(s) 238
BspCNI CTCAG 1 cut(s) 126
BsrI ACTGG 2 cut(s) 267, 336
Bst2UI CCWGG 1 cut(s) 126
Bst4CI ACNGT 1 cut(s) 256
BstAPI GCANNNNNTGC 1 cut(s) 266
BstDEI CTNAG 1 cut(s) 113
BstMWI GCNNNNNNNGC 3 cut(s) 142, 257, 266
BstNI CCWGG 1 cut(s) 126
BstSCI CCNGG 1 cut(s) 124
BstSFI CTRYAG 1 cut(s) 252
BstV1I GCAGC 3 cut(s) 47, 105, 253
BtsIMutI CAGTG 1 cut(s) 260
CviJI RGCY 9 cut(s) 38, 73, 96, 129, 177, 251, 266, 290, 310
CviKI_1 RGCY 9 cut(s) 38, 73, 96, 129, 177, 251, 266, 290, 310
DdeI CTNAG 1 cut(s) 113
Eco57I CTGAAG 1 cut(s) 157
EcoRII CCWGG 1 cut(s) 124
FaiI YATR 3 cut(s) 90, 160, 347
Fnu4HI GCNGC 3 cut(s) 36, 94, 267
Fsp4HI GCNGC 3 cut(s) 36, 94, 267
GluI GCNGC 3 cut(s) 36, 94, 267
HapII CCGG 1 cut(s) 238
HinfI GANTC 1 cut(s) 319
HpaII CCGG 1 cut(s) 238
HphI GGTGA 1 cut(s) 101
Hpy166II GTNNAC 1 cut(s) 55
Hpy188I TCNGA 3 cut(s) 213, 318, 324
Hpy8I GTNNAC 1 cut(s) 55
HpyCH4III ACNGT 1 cut(s) 256
HpyCH4V TGCA 2 cut(s) 35, 341
HpyF10VI GCNNNNNNNGC 3 cut(s) 142, 257, 266
HpyF3I CTNAG 1 cut(s) 113
LmnI GCTCC 2 cut(s) 78, 248
LpnPI CCDG 6 cut(s) 90, 111, 138, 248, 251, 317
Lsp1109I GCAGC 3 cut(s) 47, 105, 253
LweI GCATC 2 cut(s) 211, 328
MaeIII GTNAC 1 cut(s) 240
MboII GAAGA 2 cut(s) 160, 163
MluCI AATT 1 cut(s) 342
MnlI CCTC 3 cut(s) 122, 160, 212
MseI TTAA 1 cut(s) 352
MspI CCGG 1 cut(s) 238
MspR9I CCNGG 1 cut(s) 126
MvaI CCWGG 1 cut(s) 126
MwoI GCNNNNNNNGC 3 cut(s) 142, 257, 266
PfeI GAWTC 1 cut(s) 319
PkrI GCNGC 3 cut(s) 37, 95, 268
Psp6I CCWGG 1 cut(s) 124
PspGI CCWGG 1 cut(s) 124
SaqAI TTAA 1 cut(s) 352
SatI GCNGC 3 cut(s) 36, 94, 267
ScrFI CCNGG 1 cut(s) 126
SfaNI GCATC 2 cut(s) 211, 328
SfcI CTRYAG 1 cut(s) 252
Sse9I AATT 1 cut(s) 342
StyD4I CCNGG 1 cut(s) 124
TaaI ACNGT 1 cut(s) 256
TaqI TCGA 2 cut(s) 12, 336
TasI AATT 1 cut(s) 342
TfiI GAWTC 1 cut(s) 319
Tru1I TTAA 1 cut(s) 352
Tru9I TTAA 1 cut(s) 352
TscAI CASTG 1 cut(s) 267
TseI GCWGC 3 cut(s) 35, 93, 266
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.