pycom07g02050

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
1658798 .. 1659802
1005 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 240 bp
ATGCGTAAAGAAGAAGCCGTGTGTAACATAACTAATTCCGGATGGAGTTGGCAGGATGGTATACCTTATTGGGAAAAGCACTACTGCACGTTGGTGGGGTGTATACCGTGGTGGAAGGTAGTAGATGCCAAGAATTATCTGTATGGAAGTAGTATGGTACTCAATTGGAATGACTCGGCTGCTGAAGAGGCATTTCCAAAAAACGCTTTTGGCCGGCAGACATCAATGGCCTTCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

80

Amino Acids

9.1

Weight (kDa)

5.66

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 61, 103
AccIII TCCGGA 1 cut(s) 38
AcoI YGGCCR 1 cut(s) 211
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 1 cut(s) 159
AleI CACNNNNGTG 1 cut(s) 92
Aor13HI TCCGGA 1 cut(s) 38
AoxI GGCC 2 cut(s) 211, 228
ApeKI GCWGC 1 cut(s) 179
BbvI GCAGC 1 cut(s) 166
BccI CCATC 2 cut(s) 36, 50
BceAI ACGGC 1 cut(s) 2
BisI GCNGC 1 cut(s) 180
BlsI GCNGC 1 cut(s) 181
BmsI GCATC 1 cut(s) 115
BsaJI CCNNGG 1 cut(s) 107
BsaWI WCCGGW 1 cut(s) 38
Bse118I RCCGGY 1 cut(s) 213
BseAI TCCGGA 1 cut(s) 38
BseDI CCNNGG 1 cut(s) 107
BseGI GGATG 2 cut(s) 47, 61
BseXI GCAGC 1 cut(s) 166
BsgI GTGCAG 1 cut(s) 70
BshFI GGCC 2 cut(s) 213, 230
BsiSI CCGG 2 cut(s) 39, 214
BsnI GGCC 2 cut(s) 213, 230
Bsp13I TCCGGA 1 cut(s) 38
BspANI GGCC 2 cut(s) 213, 230
BspEI TCCGGA 1 cut(s) 38
BsrFI RCCGGY 1 cut(s) 213
BssAI RCCGGY 1 cut(s) 213
BssECI CCNNGG 1 cut(s) 107
BssNAI GTATAC 2 cut(s) 62, 104
Bst1107I GTATAC 2 cut(s) 62, 104
Bst4CI ACNGT 1 cut(s) 108
Bst6I CTCTTC 1 cut(s) 180
BstC8I GCNNGC 1 cut(s) 215
BstDSI CCRYGG 1 cut(s) 107
BstF5I GGATG 2 cut(s) 47, 61
BstMWI GCNNNNNNNGC 1 cut(s) 188
BstV1I GCAGC 1 cut(s) 166
BstZ17I GTATAC 2 cut(s) 62, 104
BsuRI GGCC 2 cut(s) 213, 230
BtgI CCRYGG 1 cut(s) 107
BtsCI GGATG 2 cut(s) 47, 61
Cac8I GCNNGC 1 cut(s) 215
Cfr10I RCCGGY 1 cut(s) 213
Csp6I GTAC 1 cut(s) 158
CviJI RGCY 4 cut(s) 17, 179, 213, 230
CviKI_1 RGCY 4 cut(s) 17, 179, 213, 230
CviQI GTAC 1 cut(s) 158
EaeI YGGCCR 1 cut(s) 211
Eam1104I CTCTTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 180
Eco57I CTGAAG 1 cut(s) 204
FaiI YATR 5 cut(s) 29, 62, 104, 144, 155
FblI GTMKAC 2 cut(s) 61, 103
Fnu4HI GCNGC 1 cut(s) 180
FokI GGATG 2 cut(s) 54, 68
Fsp4HI GCNGC 1 cut(s) 180
GluI GCNGC 1 cut(s) 180
HaeIII GGCC 2 cut(s) 213, 230
HapII CCGG 2 cut(s) 39, 214
HinfI GANTC 1 cut(s) 173
HpaII CCGG 2 cut(s) 39, 214
Hpy166II GTNNAC 2 cut(s) 62, 104
Hpy188III TCNNGA 1 cut(s) 39
Hpy8I GTNNAC 2 cut(s) 62, 104
HpyAV CCTTC 1 cut(s) 109
HpyCH4III ACNGT 1 cut(s) 108
HpyCH4IV ACGT 1 cut(s) 89
HpyCH4V TGCA 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 1 cut(s) 188
HpySE526I ACGT 1 cut(s) 89
Kpn2I TCCGGA 1 cut(s) 38
KroI GCCGGC 1 cut(s) 213
KroNI GCCGGC 1 cut(s) 215
LpnPI CCDG 3 cut(s) 38, 52, 227
Lsp1109I GCAGC 1 cut(s) 166
LweI GCATC 1 cut(s) 115
MaeII ACGT 1 cut(s) 89
MaeIII GTNAC 1 cut(s) 23
MboII GAAGA 2 cut(s) 23, 197
MfeI CAATTG 1 cut(s) 163
MluCI AATT 3 cut(s) 34, 133, 163
MlyI GAGTC 1 cut(s) 167
MnlI CCTC 1 cut(s) 181
MroI TCCGGA 1 cut(s) 38
MroNI GCCGGC 1 cut(s) 213
MslI CAYNNNNRTG 1 cut(s) 92
MspI CCGG 2 cut(s) 39, 214
MunI CAATTG 1 cut(s) 163
MwoI GCNNNNNNNGC 1 cut(s) 188
NaeI GCCGGC 1 cut(s) 215
NgoMIV GCCGGC 1 cut(s) 213
NmeAIII GCCGAG 1 cut(s) 155
OliI CACNNNNGTG 1 cut(s) 92
PdiI GCCGGC 1 cut(s) 215
PkrI GCNGC 1 cut(s) 181
PleI GAGTC 1 cut(s) 167
PpsI GAGTC 1 cut(s) 167
RsaI GTAC 1 cut(s) 159
RsaNI GTAC 1 cut(s) 158
RseI CAYNNNNRTG 1 cut(s) 92
SatI GCNGC 1 cut(s) 180
SchI GAGTC 1 cut(s) 167
SetI ASST 3 cut(s) 67, 92, 120
SfaNI GCATC 1 cut(s) 115
SgeI CNNG 8 cut(s) 31, 51, 65, 100, 120, 142, 187, 226
SmiMI CAYNNNNRTG 1 cut(s) 92
Sse9I AATT 3 cut(s) 34, 133, 163
TaaI ACNGT 1 cut(s) 108
TaiI ACGT 1 cut(s) 92
TasI AATT 3 cut(s) 34, 133, 163
TseI GCWGC 1 cut(s) 179
XmiI GTMKAC 2 cut(s) 61, 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.