pycom07g03060

Microtubule-associated protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
2510192 .. 2510664
473 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 408 bp
ATGTCAATAAGGTTCCCACGCCCTTCCTTCTCCCTCCTTTCTCTCCTCTGCACCCACCTAACCCTTATCTCCTCTTCAACTCCCCACACCGATTCACAAGTAACGGACACCGCCGCCATACCTCACCCCCCAACCCTCCCTCCATTCTCCCTCCTTTATCTCCTATGCACCCACCTAACCCTCATCTCCTATTTGATTCCCCGCACTGGTTCACGGGTAATGGACACTTCCGCCGCCGGTATAATTTCAGTATCGTTCAATGAGGGGAAGAGCTCATCACGGAGGAGAGGATTCAGGAGGCCTAGTATGGACAGCGACGAGCTCATAAACCTCTTGCACCGCTCGGATTCGGTCAAGGTCGAGCTCAATCGACTCGAGAATGAAGTCGGAGATGCGAATGCGGCTTGA

Protein Analysis

136

Amino Acids

14.83

Weight (kDa)

7.89

Isoelectric Point (pI)

51.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP70 PF07058 106 - 132 5.8e-06 Microtubule-associated protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 342
AciI CCGC 7 cut(s) 111, 114, 202, 231, 234, 340, 401
AfiI CCNNNNNNNGG 1 cut(s) 206
AgsI TTSAA 2 cut(s) 78, 259
AluBI AGCT 3 cut(s) 273, 322, 364
AluI AGCT 3 cut(s) 273, 322, 364
Alw21I GWGCWC 3 cut(s) 275, 324, 366
Ama87I CYCGRG 1 cut(s) 374
AoxI GGCC 1 cut(s) 299
AsuHPI GGTGA 1 cut(s) 116
AvaI CYCGRG 1 cut(s) 374
BanII GRGCYC 3 cut(s) 275, 324, 366
Bbv12I GWGCWC 3 cut(s) 275, 324, 366
BfaI CTAG 1 cut(s) 303
BisI GCNGC 3 cut(s) 114, 234, 402
BlsI GCNGC 3 cut(s) 115, 235, 403
BmeT110I CYCGRG 1 cut(s) 374
BmiI GGNNCC 1 cut(s) 14
BmsI GCATC 1 cut(s) 382
BsaXI ACNNNNNCTCC 4 cut(s) 124, 154, 289, 319
Bsc4I CCNNNNNNNGG 1 cut(s) 206
Bse118I RCCGGY 1 cut(s) 236
Bse1I ACTGG 1 cut(s) 211
BseLI CCNNNNNNNGG 1 cut(s) 206
BseNI ACTGG 1 cut(s) 211
BseRI GAGGAG 3 cut(s) 35, 61, 298
BsgI GTGCAG 1 cut(s) 34
BshFI GGCC 1 cut(s) 301
BsiHKAI GWGCWC 3 cut(s) 275, 324, 366
BsiHKCI CYCGRG 1 cut(s) 374
BsiSI CCGG 1 cut(s) 237
BslI CCNNNNNNNGG 1 cut(s) 206
BsmI GAATGC 1 cut(s) 403
BsnI GGCC 1 cut(s) 301
BsoBI CYCGRG 1 cut(s) 374
Bsp1286I GDGCHC 3 cut(s) 275, 324, 366
BspACI CCGC 7 cut(s) 111, 114, 202, 231, 234, 340, 401
BspANI GGCC 1 cut(s) 301
BspLI GGNNCC 1 cut(s) 14
BspQI GCTCTTC 1 cut(s) 263
BsrBI CCGCTC 1 cut(s) 342
BsrFI RCCGGY 1 cut(s) 236
BsrI ACTGG 1 cut(s) 211
BssAI RCCGGY 1 cut(s) 236
Bst6I CTCTTC 2 cut(s) 79, 263
BstMWI GCNNNNNNNGC 1 cut(s) 401
BsuRI GGCC 1 cut(s) 301
BtsIMutI CAGTG 1 cut(s) 204
Cfr10I RCCGGY 1 cut(s) 236
CviJI RGCY 5 cut(s) 273, 301, 322, 364, 404
CviKI_1 RGCY 5 cut(s) 273, 301, 322, 364, 404
Eam1104I CTCTTC 2 cut(s) 79, 263
EarI CTCTTC 2 cut(s) 79, 263
EciI GGCGGA 1 cut(s) 220
Ecl136II GAGCTC 3 cut(s) 273, 322, 364
Eco147I AGGCCT 1 cut(s) 301
Eco24I GRGCYC 3 cut(s) 275, 324, 366
Eco53kI GAGCTC 3 cut(s) 273, 322, 364
Eco88I CYCGRG 1 cut(s) 374
EcoICRI GAGCTC 3 cut(s) 273, 322, 364
EcoT38I GRGCYC 3 cut(s) 275, 324, 366
FaiI YATR 5 cut(s) 119, 166, 242, 308, 326
FauI CCCGC 1 cut(s) 209
Fnu4HI GCNGC 3 cut(s) 114, 234, 402
FriOI GRGCYC 3 cut(s) 275, 324, 366
Fsp4HI GCNGC 3 cut(s) 114, 234, 402
FspBI CTAG 1 cut(s) 303
GluI GCNGC 3 cut(s) 114, 234, 402
HaeIII GGCC 1 cut(s) 301
HapII CCGG 1 cut(s) 237
HinfI GANTC 5 cut(s) 92, 196, 291, 347, 372
HpaII CCGG 1 cut(s) 237
HphI GGTGA 1 cut(s) 116
Hpy166II GTNNAC 1 cut(s) 212
Hpy188I TCNGA 2 cut(s) 346, 389
Hpy188III TCNNGA 2 cut(s) 295, 376
Hpy8I GTNNAC 1 cut(s) 212
Hpy99I CGWCG 1 cut(s) 320
HpyAV CCTTC 2 cut(s) 33, 37
HpyCH4V TGCA 3 cut(s) 51, 168, 337
HpyF10VI GCNNNNNNNGC 1 cut(s) 401
LguI GCTCTTC 1 cut(s) 263
LpnPI CCDG 3 cut(s) 192, 250, 280
LweI GCATC 1 cut(s) 382
MaeI CTAG 1 cut(s) 303
MaeIII GTNAC 1 cut(s) 100
MbiI CCGCTC 1 cut(s) 342
MboII GAAGA 2 cut(s) 66, 280
MhlI GDGCHC 3 cut(s) 275, 324, 366
MluCI AATT 1 cut(s) 243
MlyI GAGTC 1 cut(s) 366
MmeI TCCRAC 1 cut(s) 367
MspI CCGG 1 cut(s) 237
Mva1269I GAATGC 1 cut(s) 403
MwoI GCNNNNNNNGC 1 cut(s) 401
NlaIV GGNNCC 1 cut(s) 14
PaeR7I CTCGAG 1 cut(s) 374
PceI AGGCCT 1 cut(s) 301
PciSI GCTCTTC 1 cut(s) 263
PctI GAATGC 1 cut(s) 403
PfeI GAWTC 4 cut(s) 92, 196, 291, 347
PkrI GCNGC 3 cut(s) 115, 235, 403
PleI GAGTC 1 cut(s) 366
PpsI GAGTC 1 cut(s) 366
Psp124BI GAGCTC 3 cut(s) 275, 324, 366
PspN4I GGNNCC 1 cut(s) 14
SacI GAGCTC 3 cut(s) 275, 324, 366
SapI GCTCTTC 1 cut(s) 263
SatI GCNGC 3 cut(s) 114, 234, 402
SchI GAGTC 1 cut(s) 366
SduI GDGCHC 3 cut(s) 275, 324, 366
SetI ASST 9 cut(s) 14, 60, 124, 177, 275, 324, 333, 360, 366
SfaNI GCATC 1 cut(s) 382
Sfr274I CTCGAG 1 cut(s) 374
SlaI CTCGAG 1 cut(s) 374
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 1 cut(s) 243
SseBI AGGCCT 1 cut(s) 301
SsiI CCGC 7 cut(s) 111, 114, 202, 231, 234, 340, 401
SspMI CTAG 1 cut(s) 303
SstI GAGCTC 3 cut(s) 275, 324, 366
StuI AGGCCT 1 cut(s) 301
TaqI TCGA 3 cut(s) 360, 370, 375
TaqII GACCGA 1 cut(s) 340
TasI AATT 1 cut(s) 243
TauI GCSGC 3 cut(s) 116, 236, 404
TfiI GAWTC 4 cut(s) 92, 196, 291, 347
TscAI CASTG 1 cut(s) 211
TspDTI ATGAA 1 cut(s) 396
TspGWI ACGGA 2 cut(s) 119, 295
TspRI CASTG 1 cut(s) 211
XhoI CTCGAG 1 cut(s) 374
XspI CTAG 1 cut(s) 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.