pycom07g03470
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
2847953 .. 2852514
4562 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 339 bp
ATGGTTAAAAATGATAGCACCAGGCAAACCGAAAACCCAAAAAGACTGAACGGAAGAACAGGAACGGTTTTGGGGGCGTTTCCAGCCAATTCAAAATTTGAAATTCATCATCTAACTATTGTGGACATGGTATCGCTCTCCAAATTGAAGGTCCTCGCCCTCCGATTGGGTTATTCTCAATCTTCCAGTTCCAGTATAGTTGCTTCCACATTCAAACGATTTGTCTCTGGAGATCCAAAACCCTCACATTTTCCTCTTCAACATCAGCTGCTACTCTGCAGACATTTCACCTCTGAAACTTCAGAAAACCACAACGATTTCACATCAATTACCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.46

Weight (kDa)

9.8

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 227
AcsI RAATTY 2 cut(s) 95, 102
AcuI CTGAAG 1 cut(s) 285
AfiI CCNNNNNNNGG 1 cut(s) 166
AgsI TTSAA 5 cut(s) 93, 101, 148, 214, 260
AjnI CCWGG 1 cut(s) 20
AluBI AGCT 1 cut(s) 268
AluI AGCT 1 cut(s) 268
Alw26I GTCTC 1 cut(s) 229
AlwI GGATC 1 cut(s) 227
ApeKI GCWGC 1 cut(s) 268
ApoI RAATTY 2 cut(s) 95, 102
ArsI GACNNNNNNTTYG 4 cut(s) 135, 167, 207, 239
AspS9I GGNCC 1 cut(s) 151
AsuHPI GGTGA 1 cut(s) 280
AvaII GGWCC 1 cut(s) 151
BarI GAAGNNNNNNTAC 2 cut(s) 187, 219
BbvI GCAGC 1 cut(s) 255
BciT130I CCWGG 1 cut(s) 22
BcoDI GTCTC 1 cut(s) 229
BfmI CTRYAG 1 cut(s) 277
BisI GCNGC 1 cut(s) 269
BlsI GCNGC 1 cut(s) 270
Bme1390I CCNGG 1 cut(s) 22
Bme18I GGWCC 1 cut(s) 151
BmgT120I GGNCC 1 cut(s) 151
BmrFI CCNGG 1 cut(s) 22
BpmI CTGGAG 1 cut(s) 249
Bsc4I CCNNNNNNNGG 1 cut(s) 166
Bse1I ACTGG 2 cut(s) 186, 192
BseBI CCWGG 1 cut(s) 22
BseLI CCNNNNNNNGG 1 cut(s) 166
BseNI ACTGG 2 cut(s) 186, 192
BseXI GCAGC 1 cut(s) 255
BslI CCNNNNNNNGG 1 cut(s) 166
BsmAI GTCTC 1 cut(s) 229
Bsp143I GATC 1 cut(s) 232
BspMAI CTGCAG 1 cut(s) 281
BspPI GGATC 1 cut(s) 227
BsrI ACTGG 2 cut(s) 186, 192
BssMI GATC 1 cut(s) 232
Bst2UI CCWGG 1 cut(s) 22
Bst4CI ACNGT 1 cut(s) 67
Bst6I CTCTTC 1 cut(s) 261
BstKTI GATC 1 cut(s) 235
BstMAI GTCTC 1 cut(s) 229
BstMBI GATC 1 cut(s) 232
BstMWI GCNNNNNNNGC 1 cut(s) 83
BstNI CCWGG 1 cut(s) 22
BstSCI CCNGG 1 cut(s) 20
BstSFI CTRYAG 1 cut(s) 277
BstV1I GCAGC 1 cut(s) 255
BstX2I RGATCY 1 cut(s) 232
BstYI RGATCY 1 cut(s) 232
Cfr13I GGNCC 1 cut(s) 151
CviAII CATG 1 cut(s) 127
CviJI RGCY 2 cut(s) 86, 268
CviKI_1 RGCY 2 cut(s) 86, 268
DpnI GATC 1 cut(s) 234
DpnII GATC 1 cut(s) 232
Eam1104I CTCTTC 1 cut(s) 261
EarI CTCTTC 1 cut(s) 261
Eco47I GGWCC 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 285
EcoO109I RGGNCCY 1 cut(s) 151
EcoRII CCWGG 1 cut(s) 20
FaeI CATG 1 cut(s) 130
FaiI YATR 3 cut(s) 128, 197, 337
FatI CATG 1 cut(s) 126
Fnu4HI GCNGC 1 cut(s) 269
Fsp4HI GCNGC 1 cut(s) 269
GluI GCNGC 1 cut(s) 269
GsuI CTGGAG 1 cut(s) 249
Hin1II CATG 1 cut(s) 130
HphI GGTGA 1 cut(s) 280
Hpy166II GTNNAC 1 cut(s) 124
Hpy188I TCNGA 3 cut(s) 164, 295, 304
Hpy188III TCNNGA 1 cut(s) 228
Hpy8I GTNNAC 1 cut(s) 124
HpyAV CCTTC 1 cut(s) 142
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4V TGCA 1 cut(s) 279
HpyF10VI GCNNNNNNNGC 1 cut(s) 83
Hsp92II CATG 1 cut(s) 130
Kzo9I GATC 1 cut(s) 232
LpnPI CCDG 7 cut(s) 7, 34, 45, 96, 199, 205, 213
Lsp1109I GCAGC 1 cut(s) 255
MalI GATC 1 cut(s) 234
MboI GATC 1 cut(s) 232
MboII GAAGA 3 cut(s) 66, 174, 248
MflI RGATCY 1 cut(s) 232
MluCI AATT 5 cut(s) 88, 95, 102, 143, 327
MnlI CCTC 5 cut(s) 164, 170, 253, 264, 301
MseI TTAA 1 cut(s) 6
MspA1I CMGCKG 1 cut(s) 268
MspR9I CCNGG 1 cut(s) 22
MvaI CCWGG 1 cut(s) 22
MwoI GCNNNNNNNGC 1 cut(s) 83
NdeII GATC 1 cut(s) 232
NlaIII CATG 1 cut(s) 130
PkrI GCNGC 1 cut(s) 270
PpuMI RGGWCCY 1 cut(s) 151
Psp5II RGGWCCY 1 cut(s) 151
Psp6I CCWGG 1 cut(s) 20
PspGI CCWGG 1 cut(s) 20
PspPI GGNCC 1 cut(s) 151
PspPPI RGGWCCY 1 cut(s) 151
PstI CTGCAG 1 cut(s) 281
PsuI RGATCY 1 cut(s) 232
PvuII CAGCTG 1 cut(s) 268
SaqAI TTAA 1 cut(s) 6
SatI GCNGC 1 cut(s) 269
Sau3AI GATC 1 cut(s) 232
Sau96I GGNCC 1 cut(s) 151
ScrFI CCNGG 1 cut(s) 22
SetI ASST 4 cut(s) 153, 270, 293, 335
SfcI CTRYAG 1 cut(s) 277
SgeI CNNG 9 cut(s) 33, 34, 72, 95, 139, 167, 198, 204, 240
SinI GGWCC 1 cut(s) 151
Sse9I AATT 5 cut(s) 88, 95, 102, 143, 327
StyD4I CCNGG 1 cut(s) 20
TaaI ACNGT 1 cut(s) 67
TasI AATT 5 cut(s) 88, 95, 102, 143, 327
Tru1I TTAA 1 cut(s) 6
Tru9I TTAA 1 cut(s) 6
TseI GCWGC 1 cut(s) 268
TspDTI ATGAA 1 cut(s) 95
TspGWI ACGGA 1 cut(s) 66
VpaK11BI GGWCC 1 cut(s) 151
XapI RAATTY 2 cut(s) 95, 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.