pycom07g04280

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
3704257 .. 3704589
333 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 333 bp
ATGTCTAGTTTGTTGGGGTTGTACTTTTGGTATGATAGGTGGTGGAGGAACAAAAGGATTATAGGGTCTCGAATGGAATCCGGTTTTGACTTGGATGAACGAGATGCTAGGATTAGAGTGAGACCAAACACCAGTTCAATTTGGTTTAAAATTCAGGACCTTGAGAAGGCAACTAATAACTTTTCGCAGAAGAATTTTATCGGTCGAGGTGGGTTCGGTGTTGTTTACAAGGGTGTGTTGCAGGACGGGACTATGGTTGCTGTTAAGAAAGTTATAGAATCTGATTTTCAAGGGGATGCTGAATTTTGCAATGAGGTTGAGATTATTATTTGA

Protein Analysis

111

Amino Acids

12.81

Weight (kDa)

7.83

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 3 cut(s) 150, 193, 302
AfaI GTAC 1 cut(s) 23
AfiI CCNNNNNNNGG 1 cut(s) 166
AgsI TTSAA 2 cut(s) 138, 290
AjuI GAANNNNNNNTTGG 2 cut(s) 118, 150
Alw26I GTCTC 2 cut(s) 72, 115
ApoI RAATTY 3 cut(s) 150, 193, 302
AspS9I GGNCC 1 cut(s) 157
AvaII GGWCC 1 cut(s) 157
BcoDI GTCTC 2 cut(s) 72, 115
BfaI CTAG 2 cut(s) 6, 108
Bme18I GGWCC 1 cut(s) 157
BmgT120I GGNCC 1 cut(s) 157
BmsI GCATC 2 cut(s) 94, 286
BpuEI CTTGAG 1 cut(s) 182
BsaI GGTCTC 2 cut(s) 72, 115
BsaWI WCCGGW 1 cut(s) 80
Bsc4I CCNNNNNNNGG 1 cut(s) 166
Bse1I ACTGG 1 cut(s) 132
Bse3DI GCAATG 1 cut(s) 316
BseGI GGATG 2 cut(s) 100, 301
BseLI CCNNNNNNNGG 1 cut(s) 166
BseMI GCAATG 1 cut(s) 316
BseNI ACTGG 1 cut(s) 132
Bsh1285I CGRYCG 1 cut(s) 205
BsiEI CGRYCG 1 cut(s) 205
BsiSI CCGG 1 cut(s) 81
BslFI GGGAC 1 cut(s) 262
BslI CCNNNNNNNGG 1 cut(s) 166
BsmAI GTCTC 2 cut(s) 72, 115
BsmFI GGGAC 1 cut(s) 262
Bso31I GGTCTC 2 cut(s) 72, 115
BspTNI GGTCTC 2 cut(s) 72, 115
BsrDI GCAATG 1 cut(s) 316
BsrI ACTGG 1 cut(s) 132
BstENI CCTNNNNNAGG 1 cut(s) 164
BstF5I GGATG 2 cut(s) 100, 301
BstMAI GTCTC 2 cut(s) 72, 115
BstMCI CGRYCG 1 cut(s) 205
BtsCI GGATG 2 cut(s) 100, 301
Cfr13I GGNCC 1 cut(s) 157
Csp6I GTAC 1 cut(s) 22
CviQI GTAC 1 cut(s) 22
DraI TTTAAA 1 cut(s) 148
Eco31I GGTCTC 2 cut(s) 72, 115
Eco47I GGWCC 1 cut(s) 157
EcoNI CCTNNNNNAGG 1 cut(s) 164
EcoO109I RGGNCCY 1 cut(s) 157
FaiI YATR 4 cut(s) 33, 62, 254, 275
FaqI GGGAC 1 cut(s) 262
FokI GGATG 2 cut(s) 107, 308
FspBI CTAG 2 cut(s) 6, 108
HapII CCGG 1 cut(s) 81
HinfI GANTC 2 cut(s) 77, 278
HpaII CCGG 1 cut(s) 81
Hpy166II GTNNAC 1 cut(s) 226
Hpy188I TCNGA 1 cut(s) 283
Hpy188III TCNNGA 2 cut(s) 69, 155
Hpy8I GTNNAC 1 cut(s) 226
HpyAV CCTTC 1 cut(s) 160
HpyCH4V TGCA 2 cut(s) 241, 309
LpnPI CCDG 4 cut(s) 94, 140, 145, 227
LweI GCATC 2 cut(s) 94, 286
MaeI CTAG 2 cut(s) 6, 108
MboII GAAGA 1 cut(s) 202
MluCI AATT 4 cut(s) 138, 150, 193, 302
MnlI CCTC 3 cut(s) 39, 200, 307
MseI TTAA 2 cut(s) 147, 264
MspI CCGG 1 cut(s) 81
PfeI GAWTC 2 cut(s) 77, 278
PpuMI RGGWCCY 1 cut(s) 157
Psp5II RGGWCCY 1 cut(s) 157
PspPI GGNCC 1 cut(s) 157
PspPPI RGGWCCY 1 cut(s) 157
RsaI GTAC 1 cut(s) 23
RsaNI GTAC 1 cut(s) 22
SaqAI TTAA 2 cut(s) 147, 264
Sau96I GGNCC 1 cut(s) 157
SetI ASST 4 cut(s) 41, 162, 211, 318
SfaNI GCATC 2 cut(s) 94, 286
SinI GGWCC 1 cut(s) 157
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 4 cut(s) 138, 150, 193, 302
SspMI CTAG 2 cut(s) 6, 108
TaqI TCGA 2 cut(s) 70, 205
TaqII GACCGA 1 cut(s) 191
TasI AATT 4 cut(s) 138, 150, 193, 302
TatI WGTACW 1 cut(s) 21
TfiI GAWTC 2 cut(s) 77, 278
Tru1I TTAA 2 cut(s) 147, 264
Tru9I TTAA 2 cut(s) 147, 264
TspDTI ATGAA 1 cut(s) 111
VpaK11BI GGWCC 1 cut(s) 157
XagI CCTNNNNNAGG 1 cut(s) 164
XapI RAATTY 3 cut(s) 150, 193, 302
XspI CTAG 2 cut(s) 6, 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.