pycom07g04300

UDP-glucose glycoprotein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
3719231 .. 3720834
1604 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 462 bp
ATGGCCAATCTGGGTTATTGGCAAATGAAATTGTCTCCTGGCGTTTGGTACTTGCAACTTGCTCCAGATAGAAGTTCTGAACTTTATTTTCTGAAAGAGGACGGCAACGAAAGTGGGAGCAAAACATTATCCAAACGTATCACCATAGACGATTTACGGGGTAAAGTAGTTCACATGGAAGTAGCAAAAAAAAAGGGAAAGGAGCATGAGAAATTGTTGGTTCCTGATGGCGAAGACAACTTACACGATAATAAGGAGGGAAGTAGCTGGAACTCCAACTTCTTGAAATGGGCTTCTGGTTTTATTGGTGGTGGTGAGCAATCTAAAAAGAGTGAAAGTACTTCAGCGGAGCAAGGAAAGGGTGGACGACATGGAAAAACGATTAATATTTTTTCTATTGCTTCTGGACACCTGATGTCATTCCACCTATGGCTCAAGAATATGGTATTGAGTATGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003980 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006011 GO:0006139 GO:0006457 GO:0006458 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006515 GO:0006725 GO:0006793 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008219 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009225 GO:0009626 GO:0009719 GO:0009725 GO:0009751 GO:0009812 GO:0009987 GO:0010033 GO:0010204 GO:0010243 GO:0010498 GO:0012501 GO:0012505 GO:0014070 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0023052 GO:0030163 GO:0030968 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0034620 GO:0034641 GO:0034645 GO:0034976 GO:0035251 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0042221 GO:0042440 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046527 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051084 GO:0051603 GO:0051716 GO:0051788 GO:0055086 GO:0065007 GO:0070085 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0080134 GO:0097359 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1901700
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

154

Amino Acids

17.1

Weight (kDa)

9.05

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDP-g_GGTase PF06427 1 - 73 1.2e-17 UDP-glucose:Glycoprotein Glucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 347
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 327
AfaI GTAC 2 cut(s) 50, 340
AgsI TTSAA 1 cut(s) 286
AjnI CCWGG 1 cut(s) 37
AluBI AGCT 1 cut(s) 267
AluI AGCT 1 cut(s) 267
Alw26I GTCTC 1 cut(s) 39
AoxI GGCC 1 cut(s) 3
AseI ATTAAT 1 cut(s) 384
AsuHPI GGTGA 2 cut(s) 133, 326
BalI TGGCCA 1 cut(s) 5
BarI GAAGNNNNNNTAC 2 cut(s) 225, 257
BbsI GAAGAC 1 cut(s) 240
BccI CCATC 1 cut(s) 221
BceAI ACGGC 1 cut(s) 118
BciT130I CCWGG 1 cut(s) 39
BcoDI GTCTC 1 cut(s) 39
BmcAI AGTACT 1 cut(s) 340
Bme1390I CCNGG 1 cut(s) 39
BmiI GGNNCC 1 cut(s) 222
BmrFI CCNGG 1 cut(s) 39
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 48
BpuEI CTTGAG 1 cut(s) 419
BseBI CCWGG 1 cut(s) 39
BshFI GGCC 1 cut(s) 5
BsmAI GTCTC 1 cut(s) 39
BsnI GGCC 1 cut(s) 5
BspACI CCGC 1 cut(s) 347
BspANI GGCC 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 222
Bst2UI CCWGG 1 cut(s) 39
BstMAI GTCTC 1 cut(s) 39
BstNI CCWGG 1 cut(s) 39
BstSCI CCNGG 1 cut(s) 37
BstV2I GAAGAC 1 cut(s) 240
BsuRI GGCC 1 cut(s) 5
Csp6I GTAC 2 cut(s) 49, 339
CspCI CAANNNNNGTGG 2 cut(s) 94, 129
CviAII CATG 3 cut(s) 175, 206, 371
CviJI RGCY 4 cut(s) 5, 267, 293, 433
CviKI_1 RGCY 4 cut(s) 5, 267, 293, 433
CviQI GTAC 2 cut(s) 49, 339
EaeI YGGCCR 1 cut(s) 3
Eco57I CTGAAG 1 cut(s) 327
EcoRII CCWGG 1 cut(s) 37
FaeI CATG 3 cut(s) 178, 209, 374
FaiI YATR 7 cut(s) 146, 176, 207, 372, 430, 443, 455
FatI CATG 3 cut(s) 174, 205, 370
GsuI CTGGAG 1 cut(s) 48
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 3 cut(s) 178, 209, 374
HphI GGTGA 2 cut(s) 133, 326
Hpy166II GTNNAC 2 cut(s) 172, 365
Hpy188I TCNGA 2 cut(s) 79, 93
Hpy188III TCNNGA 5 cut(s) 65, 224, 283, 405, 436
Hpy8I GTNNAC 2 cut(s) 172, 365
HpyCH4IV ACGT 1 cut(s) 136
HpyCH4V TGCA 1 cut(s) 55
HpySE526I ACGT 1 cut(s) 136
Hsp92II CATG 3 cut(s) 178, 209, 374
LmnI GCTCC 4 cut(s) 67, 117, 202, 349
LpnPI CCDG 8 cut(s) 24, 51, 78, 237, 253, 282, 390, 425
MaeII ACGT 1 cut(s) 136
MboII GAAGA 1 cut(s) 245
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 29, 212
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 300
MnlI CCTC 2 cut(s) 91, 250
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 384
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 347
MspR9I CCNGG 1 cut(s) 39
MvaI CCWGG 1 cut(s) 39
NlaIII CATG 3 cut(s) 178, 209, 374
NlaIV GGNNCC 1 cut(s) 222
PshBI ATTAAT 1 cut(s) 384
Psp6I CCWGG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 37
PspN4I GGNNCC 1 cut(s) 222
RsaI GTAC 2 cut(s) 50, 340
RsaNI GTAC 2 cut(s) 49, 339
SaqAI TTAA 1 cut(s) 384
ScaI AGTACT 1 cut(s) 340
ScrFI CCNGG 1 cut(s) 39
SetI ASST 4 cut(s) 139, 269, 414, 429
SmlI CTYRAG 1 cut(s) 434
SmoI CTYRAG 1 cut(s) 434
Sse9I AATT 2 cut(s) 29, 212
SsiI CCGC 1 cut(s) 347
SspI AATATT 1 cut(s) 388
StyD4I CCNGG 1 cut(s) 37
TaiI ACGT 1 cut(s) 139
TasI AATT 2 cut(s) 29, 212
TatI WGTACW 1 cut(s) 338
Tru1I TTAA 1 cut(s) 384
Tru9I TTAA 1 cut(s) 384
TspDTI ATGAA 1 cut(s) 41
VspI ATTAAT 1 cut(s) 384
ZrmI AGTACT 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.