pycom07g05340

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
4615296 .. 4615550
255 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 255 bp
ATGAGTTACAGAGGAGGAAGAGAAAGATGGTTAATTATAACCACATTATCGTGTATTCAAACGAAACCAAGTGATCGCCCTTCGATGTACAAAGTCATCGAAATGCTTGGAAGAGATGTTGAATGTCTGCAATTGCTTCTCAGGCCTTCTCTGTGCCCACAAGAGGCGTCTGTGACTGTAGGTGATATTAAAGAAAATAAATCGAACCCAATGTGTTCTAACATCGAGCTAACATGTTCATCATCAACTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

85

Amino Acids

9.47

Weight (kDa)

8.35

Isoelectric Point (pI)

76.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 38
AcyI GRCGYC 1 cut(s) 167
AfaI GTAC 1 cut(s) 89
AfiI CCNNNNNNNGG 1 cut(s) 163
AflIII ACRYGT 1 cut(s) 233
AgsI TTSAA 2 cut(s) 59, 122
AluBI AGCT 1 cut(s) 229
AluI AGCT 1 cut(s) 229
AoxI GGCC 1 cut(s) 143
AsuHPI GGTGA 1 cut(s) 194
BaeGI GKGCMC 1 cut(s) 158
BccI CCATC 1 cut(s) 21
BfaI CTAG 1 cut(s) 249
BfmI CTRYAG 1 cut(s) 177
BsaHI GRCGYC 1 cut(s) 167
Bsc4I CCNNNNNNNGG 1 cut(s) 163
BseLI CCNNNNNNNGG 1 cut(s) 163
BseMII CTCAG 1 cut(s) 154
BseRI GAGGAG 1 cut(s) 27
BseSI GKGCMC 1 cut(s) 158
BshFI GGCC 1 cut(s) 145
BslI CCNNNNNNNGG 1 cut(s) 163
BsnI GGCC 1 cut(s) 145
Bsp1286I GDGCHC 1 cut(s) 158
Bsp1407I TGTACA 1 cut(s) 87
Bsp143I GATC 1 cut(s) 73
BspANI GGCC 1 cut(s) 145
BspCNI CTCAG 1 cut(s) 153
BsrGI TGTACA 1 cut(s) 87
BssMI GATC 1 cut(s) 73
BssNI GRCGYC 1 cut(s) 167
Bst4CI ACNGT 1 cut(s) 178
Bst6I CTCTTC 2 cut(s) 13, 106
BstACI GRCGYC 1 cut(s) 167
BstAUI TGTACA 1 cut(s) 87
BstDEI CTNAG 1 cut(s) 140
BstKTI GATC 1 cut(s) 76
BstMBI GATC 1 cut(s) 73
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstNSI RCATGY 1 cut(s) 237
BstSFI CTRYAG 1 cut(s) 177
BstSLI GKGCMC 1 cut(s) 158
BsuRI GGCC 1 cut(s) 145
CseI GACGC 1 cut(s) 156
Csp6I GTAC 1 cut(s) 88
CviAII CATG 1 cut(s) 234
CviJI RGCY 2 cut(s) 145, 229
CviKI_1 RGCY 2 cut(s) 145, 229
CviQI GTAC 1 cut(s) 88
DdeI CTNAG 1 cut(s) 140
DpnI GATC 1 cut(s) 75
DpnII GATC 1 cut(s) 73
Eam1104I CTCTTC 2 cut(s) 13, 106
EarI CTCTTC 2 cut(s) 13, 106
Eco147I AGGCCT 1 cut(s) 145
FaeI CATG 1 cut(s) 237
FaiI YATR 2 cut(s) 38, 235
FatI CATG 1 cut(s) 233
FspBI CTAG 1 cut(s) 249
HaeIII GGCC 1 cut(s) 145
HgaI GACGC 1 cut(s) 156
Hin1I GRCGYC 1 cut(s) 167
Hin1II CATG 1 cut(s) 237
HphI GGTGA 1 cut(s) 194
HpyAV CCTTC 2 cut(s) 90, 156
HpyCH4III ACNGT 1 cut(s) 178
HpyCH4V TGCA 1 cut(s) 130
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
HpyF3I CTNAG 1 cut(s) 140
Hsp92I GRCGYC 1 cut(s) 167
Hsp92II CATG 1 cut(s) 237
Kzo9I GATC 1 cut(s) 73
LpnPI CCDG 1 cut(s) 127
MaeI CTAG 1 cut(s) 249
MaeIII GTNAC 2 cut(s) 5, 172
MalI GATC 1 cut(s) 75
MboI GATC 1 cut(s) 73
MboII GAAGA 2 cut(s) 30, 123
MfeI CAATTG 1 cut(s) 131
MhlI GDGCHC 1 cut(s) 158
MluCI AATT 2 cut(s) 33, 131
MnlI CCTC 3 cut(s) 5, 8, 157
MseI TTAA 2 cut(s) 32, 189
MslI CAYNNNNRTG 2 cut(s) 49, 101
MunI CAATTG 1 cut(s) 131
MwoI GCNNNNNNNGC 1 cut(s) 142
NdeII GATC 1 cut(s) 73
NlaIII CATG 1 cut(s) 237
NmuCI GTSAC 1 cut(s) 172
NspI RCATGY 1 cut(s) 237
PceI AGGCCT 1 cut(s) 145
PciI ACATGT 1 cut(s) 233
PscI ACATGT 1 cut(s) 233
PsiI TTATAA 1 cut(s) 38
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
RseI CAYNNNNRTG 2 cut(s) 49, 101
SaqAI TTAA 2 cut(s) 32, 189
Sau3AI GATC 1 cut(s) 73
SduI GDGCHC 1 cut(s) 158
SetI ASST 3 cut(s) 184, 231, 254
SfcI CTRYAG 1 cut(s) 177
SgeI CNNG 7 cut(s) 63, 81, 119, 154, 173, 238, 246
SmiMI CAYNNNNRTG 2 cut(s) 49, 101
Sse9I AATT 2 cut(s) 33, 131
SseBI AGGCCT 1 cut(s) 145
SspMI CTAG 1 cut(s) 249
StuI AGGCCT 1 cut(s) 145
TaaI ACNGT 1 cut(s) 178
TaqI TCGA 4 cut(s) 83, 99, 203, 225
TasI AATT 2 cut(s) 33, 131
TatI WGTACW 1 cut(s) 87
Tru1I TTAA 2 cut(s) 32, 189
Tru9I TTAA 2 cut(s) 32, 189
TseFI GTSAC 1 cut(s) 172
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 1 cut(s) 228
XceI RCATGY 1 cut(s) 237
XspI CTAG 1 cut(s) 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.