pycom07g07260

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
6576043 .. 6584805
8763 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGGGAATTTGGAATTACCATATCACTTTTTGCAACACTAAAGATTGGGTTATAATGGATATGCAGATCTTTGAGAGGATAAACACTACCCCCATGAGCTTAAATGATTTACACAAAACCTATGACCCTCACACTGCTGCAGAATATGGCATGGGACATGAAGTGTGGACACAAGGTGATGTGTACAGCTTTGGTATCCTCCTGTTGGAAATATTTACAGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

76

Amino Acids

8.79

Weight (kDa)

5.01

Isoelectric Point (pI)

21.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 53
AcsI RAATTY 1 cut(s) 6
AdeI CACNNNGTG 1 cut(s) 176
AfaI GTAC 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 205
AluBI AGCT 2 cut(s) 99, 189
AluI AGCT 2 cut(s) 99, 189
ApeKI GCWGC 1 cut(s) 137
ApoI RAATTY 1 cut(s) 6
AsuHPI GGTGA 1 cut(s) 188
BbvI GCAGC 1 cut(s) 124
BciVI GTATCC 1 cut(s) 206
BfmI CTRYAG 1 cut(s) 138
BfuI GTATCC 1 cut(s) 206
BglII AGATCT 1 cut(s) 66
BisI GCNGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 139
Bsc4I CCNNNNNNNGG 1 cut(s) 205
BseLI CCNNNNNNNGG 1 cut(s) 205
BseXI GCAGC 1 cut(s) 124
BslFI GGGAC 1 cut(s) 168
BslI CCNNNNNNNGG 1 cut(s) 205
BsmFI GGGAC 1 cut(s) 168
Bsp1407I TGTACA 1 cut(s) 183
Bsp143I GATC 1 cut(s) 66
BspMAI CTGCAG 1 cut(s) 142
BsrGI TGTACA 1 cut(s) 183
BssMI GATC 1 cut(s) 66
BstAUI TGTACA 1 cut(s) 183
BstKTI GATC 1 cut(s) 69
BstMBI GATC 1 cut(s) 66
BstSFI CTRYAG 1 cut(s) 138
BstV1I GCAGC 1 cut(s) 124
BstX2I RGATCY 1 cut(s) 66
BstYI RGATCY 1 cut(s) 66
BsuI GTATCC 1 cut(s) 206
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 1 cut(s) 132
Csp6I GTAC 1 cut(s) 184
CviAII CATG 3 cut(s) 94, 151, 158
CviJI RGCY 2 cut(s) 99, 189
CviKI_1 RGCY 2 cut(s) 99, 189
CviQI GTAC 1 cut(s) 184
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
DraIII CACNNNGTG 1 cut(s) 176
FaeI CATG 3 cut(s) 97, 154, 161
FaiI YATR 8 cut(s) 21, 53, 62, 95, 123, 147, 152, 159
FaqI GGGAC 1 cut(s) 168
FatI CATG 3 cut(s) 93, 150, 157
Fnu4HI GCNGC 1 cut(s) 138
Fsp4HI GCNGC 1 cut(s) 138
GluI GCNGC 1 cut(s) 138
Hin1II CATG 3 cut(s) 97, 154, 161
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 2 cut(s) 168, 184
Hpy8I GTNNAC 2 cut(s) 168, 184
HpyCH4V TGCA 3 cut(s) 33, 64, 140
Hsp92II CATG 3 cut(s) 97, 154, 161
Kzo9I GATC 1 cut(s) 66
LpnPI CCDG 2 cut(s) 204, 215
Lsp1109I GCAGC 1 cut(s) 124
MalI GATC 1 cut(s) 68
MboI GATC 1 cut(s) 66
MflI RGATCY 1 cut(s) 66
MluCI AATT 2 cut(s) 6, 13
MmeI TCCRAC 1 cut(s) 186
MnlI CCTC 3 cut(s) 69, 138, 209
MseI TTAA 1 cut(s) 101
NdeII GATC 1 cut(s) 66
NlaIII CATG 3 cut(s) 97, 154, 161
PkrI GCNGC 1 cut(s) 139
PsiI TTATAA 1 cut(s) 53
PstI CTGCAG 1 cut(s) 142
PsuI RGATCY 1 cut(s) 66
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
SaqAI TTAA 1 cut(s) 101
SatI GCNGC 1 cut(s) 138
Sau3AI GATC 1 cut(s) 66
SetI ASST 4 cut(s) 101, 122, 178, 191
SfcI CTRYAG 1 cut(s) 138
SgeI CNNG 5 cut(s) 106, 163, 170, 185, 214
Sse9I AATT 2 cut(s) 6, 13
SspI AATATT 1 cut(s) 213
TasI AATT 2 cut(s) 6, 13
TatI WGTACW 1 cut(s) 183
Tru1I TTAA 1 cut(s) 101
Tru9I TTAA 1 cut(s) 101
TscAI CASTG 1 cut(s) 139
TseI GCWGC 1 cut(s) 137
TspDTI ATGAA 1 cut(s) 174
TspRI CASTG 1 cut(s) 139
XapI RAATTY 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.