pycom07g07270
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
6596421 .. 6596760
340 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 258 bp
ATGCTTAATTTTAACGCAGTGGAGGGATTTGATTTACCTTTCATTTTGTCGATCCGAGTTCTTGCAGCCATCTTTGCTGTGTGTACGGCACCTTCAATTGTGAGCCATTGCTTCTTGCAGTTCCTATTCCCCTTGGCCTTACTCGGATCCCCAAGTCCACATACAGAAAACATACATATATTGCCAAGTGGAGACCATAATCGCAGAGAGAATGAGAGATCTTTACCTCGGTTTTCGCAGAGGAATGCACGATGGTGA

Protein Analysis

86

Amino Acids

9.62

Weight (kDa)

7.92

Isoelectric Point (pI)

88.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 88
AclWI GGATC 3 cut(s) 46, 141, 154
AfaI GTAC 1 cut(s) 85
AgsI TTSAA 1 cut(s) 96
AleI CACNNNNGTG 1 cut(s) 253
Alw26I GTCTC 1 cut(s) 186
AlwI GGATC 3 cut(s) 46, 141, 154
AoxI GGCC 1 cut(s) 135
ApeKI GCWGC 1 cut(s) 65
BamHI GGATCC 1 cut(s) 146
BanI GGYRCC 1 cut(s) 88
BarI GAAGNNNNNNTAC 2 cut(s) 76, 108
BbvI GCAGC 1 cut(s) 77
BccI CCATC 2 cut(s) 77, 246
BceAI ACGGC 1 cut(s) 102
BcoDI GTCTC 1 cut(s) 186
BglII AGATCT 1 cut(s) 218
BisI GCNGC 1 cut(s) 66
BlsI GCNGC 1 cut(s) 67
BmiI GGNNCC 2 cut(s) 90, 148
BsaI GGTCTC 1 cut(s) 186
BsaJI CCNNGG 2 cut(s) 132, 227
Bse3DI GCAATG 1 cut(s) 106
BseDI CCNNGG 2 cut(s) 132, 227
BseMI GCAATG 1 cut(s) 106
BseXI GCAGC 1 cut(s) 77
BshFI GGCC 1 cut(s) 137
BshNI GGYRCC 1 cut(s) 88
BsmAI GTCTC 1 cut(s) 186
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 1 cut(s) 137
Bso31I GGTCTC 1 cut(s) 186
Bsp143I GATC 3 cut(s) 51, 146, 218
BspANI GGCC 1 cut(s) 137
BspLI GGNNCC 2 cut(s) 90, 148
BspPI GGATC 3 cut(s) 46, 141, 154
BspT107I GGYRCC 1 cut(s) 88
BspTNI GGTCTC 1 cut(s) 186
BsrDI GCAATG 1 cut(s) 106
BssECI CCNNGG 2 cut(s) 132, 227
BssMI GATC 3 cut(s) 51, 146, 218
BssT1I CCWWGG 1 cut(s) 132
BstKTI GATC 3 cut(s) 54, 149, 221
BstMAI GTCTC 1 cut(s) 186
BstMBI GATC 3 cut(s) 51, 146, 218
BstMWI GCNNNNNNNGC 1 cut(s) 74
BstV1I GCAGC 1 cut(s) 77
BstX2I RGATCY 2 cut(s) 146, 218
BstYI RGATCY 2 cut(s) 146, 218
BsuRI GGCC 1 cut(s) 137
BtsI GCAGTG 1 cut(s) 24
BtsIMutI CAGTG 1 cut(s) 24
Csp6I GTAC 1 cut(s) 84
CviJI RGCY 3 cut(s) 68, 105, 137
CviKI_1 RGCY 3 cut(s) 68, 105, 137
CviQI GTAC 1 cut(s) 84
DpnI GATC 3 cut(s) 53, 148, 220
DpnII GATC 3 cut(s) 51, 146, 218
Eco130I CCWWGG 1 cut(s) 132
Eco31I GGTCTC 1 cut(s) 186
EcoT14I CCWWGG 1 cut(s) 132
ErhI CCWWGG 1 cut(s) 132
FaiI YATR 5 cut(s) 162, 173, 177, 179, 198
Fnu4HI GCNGC 1 cut(s) 66
Fsp4HI GCNGC 1 cut(s) 66
GluI GCNGC 1 cut(s) 66
HaeIII GGCC 1 cut(s) 137
Hpy166II GTNNAC 2 cut(s) 84, 158
Hpy188I TCNGA 2 cut(s) 56, 146
Hpy8I GTNNAC 2 cut(s) 84, 158
HpyAV CCTTC 1 cut(s) 102
HpyCH4V TGCA 3 cut(s) 65, 118, 248
HpyF10VI GCNNNNNNNGC 1 cut(s) 74
Kzo9I GATC 3 cut(s) 51, 146, 218
Lsp1109I GCAGC 1 cut(s) 77
MalI GATC 3 cut(s) 53, 148, 220
MboI GATC 3 cut(s) 51, 146, 218
MfeI CAATTG 1 cut(s) 96
MflI RGATCY 2 cut(s) 146, 218
MluCI AATT 2 cut(s) 7, 96
MnlI CCTC 3 cut(s) 16, 234, 237
MseI TTAA 2 cut(s) 6, 12
MslI CAYNNNNRTG 1 cut(s) 253
MunI CAATTG 1 cut(s) 96
Mva1269I GAATGC 1 cut(s) 250
MwoI GCNNNNNNNGC 1 cut(s) 74
NdeII GATC 3 cut(s) 51, 146, 218
NlaIV GGNNCC 2 cut(s) 90, 148
OliI CACNNNNGTG 1 cut(s) 253
PctI GAATGC 1 cut(s) 250
PkrI GCNGC 1 cut(s) 67
PspN4I GGNNCC 2 cut(s) 90, 148
PsuI RGATCY 2 cut(s) 146, 218
RsaI GTAC 1 cut(s) 85
RsaNI GTAC 1 cut(s) 84
RseI CAYNNNNRTG 1 cut(s) 253
SaqAI TTAA 2 cut(s) 6, 12
SatI GCNGC 1 cut(s) 66
Sau3AI GATC 3 cut(s) 51, 146, 218
SetI ASST 3 cut(s) 40, 94, 229
SgeI CNNG 8 cut(s) 68, 74, 127, 145, 155, 165, 198, 240
SmiMI CAYNNNNRTG 1 cut(s) 253
Sse9I AATT 2 cut(s) 7, 96
StyI CCWWGG 1 cut(s) 132
TaqI TCGA 1 cut(s) 50
TasI AATT 2 cut(s) 7, 96
Tru1I TTAA 2 cut(s) 6, 12
Tru9I TTAA 2 cut(s) 6, 12
TscAI CASTG 1 cut(s) 24
TseI GCWGC 1 cut(s) 65
TspDTI ATGAA 1 cut(s) 31
TspRI CASTG 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.