pycom07g08630

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
7891618 .. 7891980
363 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 363 bp
ATGGAGCATTCAAAAATGGTAGTGCAACATAGCGGCGGACTTCCATTAGCTCTAAAAGTTTTAGGTTCTTCTTTATCAGGGGAAAGTATAGATGTATGGGAAAGTGCATTGGAGAAGCTAAAAGTTATCCCTAATGGTGAAATCATGAATAAACTAAGAATAAGTTATGACAATTTACAAGATGACCATGACCAGAAATTATTCCTCCACATTGCTTGTTTCCTAATAGGAAGGGACAAAAAAACTACATTGTTAGAATACTCGATGGATGTGATTTCTGTACAATTGTTGGCATTCAAAATCTCATTGATAGATGCTTGGAGACAATTGATGGATACAACAACGTGCAAATGCATGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.55

Weight (kDa)

6.04

Isoelectric Point (pI)

30.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 33, 36
AfaI GTAC 1 cut(s) 282
AgsI TTSAA 2 cut(s) 12, 298
AluBI AGCT 2 cut(s) 50, 118
AluI AGCT 2 cut(s) 50, 118
Alw26I GTCTC 1 cut(s) 316
Asp700I GAANNNNTTC 1 cut(s) 200
AsuHPI GGTGA 1 cut(s) 149
BccI CCATC 2 cut(s) 259, 325
BciVI GTATCC 1 cut(s) 328
BcoDI GTCTC 1 cut(s) 316
BfuI GTATCC 1 cut(s) 328
BisI GCNGC 1 cut(s) 34
BlsI GCNGC 1 cut(s) 35
BmsI GCATC 1 cut(s) 304
Bse3DI GCAATG 1 cut(s) 210
BseGI GGATG 1 cut(s) 274
BseMI GCAATG 1 cut(s) 210
BslFI GGGAC 1 cut(s) 248
BsmAI GTCTC 1 cut(s) 316
BsmFI GGGAC 1 cut(s) 248
BsmI GAATGC 2 cut(s) 7, 293
Bsp1407I TGTACA 1 cut(s) 280
BspACI CCGC 2 cut(s) 33, 36
BspHI TCATGA 1 cut(s) 144
BsrDI GCAATG 1 cut(s) 210
BsrGI TGTACA 1 cut(s) 280
BstAUI TGTACA 1 cut(s) 280
BstDEI CTNAG 1 cut(s) 155
BstF5I GGATG 1 cut(s) 274
BstMAI GTCTC 1 cut(s) 316
BsuI GTATCC 1 cut(s) 328
BtsCI GGATG 1 cut(s) 274
CciI TCATGA 1 cut(s) 144
Csp6I GTAC 1 cut(s) 281
CspCI CAANNNNNGTGG 2 cut(s) 197, 232
CviAII CATG 4 cut(s) 145, 188, 355, 360
CviJI RGCY 2 cut(s) 50, 118
CviKI_1 RGCY 2 cut(s) 50, 118
CviQI GTAC 1 cut(s) 281
DdeI CTNAG 1 cut(s) 155
EciI GGCGGA 1 cut(s) 51
EcoT22I ATGCAT 1 cut(s) 356
FaeI CATG 4 cut(s) 148, 191, 358, 363
FaiI YATR 8 cut(s) 30, 89, 97, 146, 168, 189, 356, 361
FaqI GGGAC 1 cut(s) 248
FatI CATG 4 cut(s) 144, 187, 354, 359
Fnu4HI GCNGC 1 cut(s) 34
FokI GGATG 1 cut(s) 281
Fsp4HI GCNGC 1 cut(s) 34
GluI GCNGC 1 cut(s) 34
Hin1II CATG 4 cut(s) 148, 191, 358, 363
HphI GGTGA 1 cut(s) 149
Hpy188III TCNNGA 1 cut(s) 145
HpyAV CCTTC 1 cut(s) 225
HpyCH4IV ACGT 1 cut(s) 344
HpyCH4V TGCA 4 cut(s) 25, 107, 348, 354
HpyF3I CTNAG 1 cut(s) 155
HpySE526I ACGT 1 cut(s) 344
Hsp92II CATG 4 cut(s) 148, 191, 358, 363
LmnI GCTCC 1 cut(s) 4
LpnPI CCDG 2 cut(s) 63, 206
LweI GCATC 1 cut(s) 304
MaeII ACGT 1 cut(s) 344
MboII GAAGA 1 cut(s) 60
MfeI CAATTG 2 cut(s) 284, 326
MluCI AATT 4 cut(s) 172, 197, 284, 326
MnlI CCTC 1 cut(s) 215
Mph1103I ATGCAT 1 cut(s) 356
MroXI GAANNNNTTC 1 cut(s) 200
MunI CAATTG 2 cut(s) 284, 326
Mva1269I GAATGC 2 cut(s) 7, 293
NlaIII CATG 4 cut(s) 148, 191, 358, 363
NsiI ATGCAT 1 cut(s) 356
PagI TCATGA 1 cut(s) 144
PctI GAATGC 2 cut(s) 7, 293
PdmI GAANNNNTTC 1 cut(s) 200
PkrI GCNGC 1 cut(s) 35
RsaI GTAC 1 cut(s) 282
RsaNI GTAC 1 cut(s) 281
SatI GCNGC 1 cut(s) 34
SetI ASST 4 cut(s) 52, 67, 120, 347
SfaNI GCATC 1 cut(s) 304
SgeI CNNG 9 cut(s) 90, 157, 191, 200, 205, 228, 274, 330, 357
Sse9I AATT 4 cut(s) 172, 197, 284, 326
SsiI CCGC 2 cut(s) 33, 36
TaiI ACGT 1 cut(s) 347
TaqI TCGA 1 cut(s) 263
TasI AATT 4 cut(s) 172, 197, 284, 326
TatI WGTACW 1 cut(s) 280
TauI GCSGC 1 cut(s) 36
TspDTI ATGAA 1 cut(s) 161
XmnI GAANNNNTTC 1 cut(s) 200
Zsp2I ATGCAT 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.