pycom07g08820

Apoptosis antagonizing transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
8057699 .. 8059258
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 387 bp
ATGGCGATGAAGGCTCTTGACAGTGACAGTGAGTTCGGGGACAATGGCGATTTCAACAGCAATGAGTTGAATATGGAGCAGGAAGAGGATGACTTTGATGATGAGCACGACGGCGAGGAGAAGGAAGAAGATGGAGAAGAAGTTGGGGAAGAGGAAAATGGCGATGGGCAAAATGATAATAAAGATGCCGAGATGGAAGAACTCGAGAAAGAATACATGAACCTTCGTCATCAGGAGCAGTTGCATGCTAAGAAGAAGAAAATTGTTTCTAATAGTTGCAAGATAAGGTATAATGTTTATGAGAAGATAGTAAATTTCATGGCTCCAGAGACCATGGTCAATAATTTGTTCGGGTTGAAGAAGCAGAAACCAGCTTCCGTAGTGTAG

Protein Analysis

129

Amino Acids

14.77

Weight (kDa)

4.31

Isoelectric Point (pI)

47.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TRAUB PF08164 62 - 111 5.2e-07 Apoptosis-antagonizing transcription factor, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 313
AgsI TTSAA 3 cut(s) 55, 70, 358
AluBI AGCT 1 cut(s) 374
AluI AGCT 1 cut(s) 374
Alw21I GWGCWC 1 cut(s) 108
Alw26I GTCTC 1 cut(s) 323
Ama87I CYCGRG 1 cut(s) 203
ApoI RAATTY 1 cut(s) 313
ArsI GACNNNNNNTTYG 2 cut(s) 17, 49
AvaI CYCGRG 1 cut(s) 203
Bbv12I GWGCWC 1 cut(s) 108
BccI CCATC 3 cut(s) 125, 158, 187
BceAI ACGGC 1 cut(s) 127
BcoDI GTCTC 1 cut(s) 323
BmeT110I CYCGRG 1 cut(s) 203
BmiI GGNNCC 1 cut(s) 324
BmsI GCATC 1 cut(s) 175
BoxI GACNNNNGTC 1 cut(s) 335
BpmI CTGGAG 1 cut(s) 309
BsaI GGTCTC 1 cut(s) 323
BsaJI CCNNGG 1 cut(s) 333
BsaXI ACNNNNNCTCC 2 cut(s) 126, 156
Bse3DI GCAATG 1 cut(s) 67
BseDI CCNNGG 1 cut(s) 333
BseGI GGATG 1 cut(s) 94
BseMI GCAATG 1 cut(s) 67
BseRI GAGGAG 1 cut(s) 131
BsiHKAI GWGCWC 1 cut(s) 108
BsiHKCI CYCGRG 1 cut(s) 203
BslFI GGGAC 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 323
BsmFI GGGAC 1 cut(s) 53
Bso31I GGTCTC 1 cut(s) 323
BsoBI CYCGRG 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 108
Bsp19I CCATGG 1 cut(s) 333
BspLI GGNNCC 1 cut(s) 324
BspTNI GGTCTC 1 cut(s) 323
BsrDI GCAATG 1 cut(s) 67
BssECI CCNNGG 1 cut(s) 333
BssT1I CCWWGG 1 cut(s) 333
Bst4CI ACNGT 2 cut(s) 23, 29
Bst6I CTCTTC 2 cut(s) 78, 144
BstC8I GCNNGC 1 cut(s) 246
BstDEI CTNAG 1 cut(s) 249
BstDSI CCRYGG 1 cut(s) 333
BstF5I GGATG 1 cut(s) 94
BstMAI GTCTC 1 cut(s) 323
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstNSI RCATGY 1 cut(s) 248
BstPAI GACNNNNGTC 1 cut(s) 335
BtgI CCRYGG 1 cut(s) 333
BtgZI GCGATG 2 cut(s) 20, 177
BtsCI GGATG 1 cut(s) 94
BtsIMutI CAGTG 2 cut(s) 28, 34
Cac8I GCNNGC 1 cut(s) 246
CviAII CATG 4 cut(s) 217, 245, 319, 334
CviJI RGCY 3 cut(s) 14, 323, 374
CviKI_1 RGCY 3 cut(s) 14, 323, 374
DdeI CTNAG 1 cut(s) 249
Eam1104I CTCTTC 2 cut(s) 78, 144
EarI CTCTTC 2 cut(s) 78, 144
Eco130I CCWWGG 1 cut(s) 333
Eco31I GGTCTC 1 cut(s) 323
Eco88I CYCGRG 1 cut(s) 203
EcoT14I CCWWGG 1 cut(s) 333
ErhI CCWWGG 1 cut(s) 333
FaeI CATG 4 cut(s) 220, 248, 322, 337
FaiI YATR 7 cut(s) 74, 218, 246, 291, 300, 320, 335
FaqI GGGAC 1 cut(s) 53
FatI CATG 4 cut(s) 216, 244, 318, 333
FokI GGATG 1 cut(s) 101
GsuI CTGGAG 1 cut(s) 309
Hin1II CATG 4 cut(s) 220, 248, 322, 337
Hpy188III TCNNGA 4 cut(s) 17, 205, 233, 326
Hpy99I CGWCG 1 cut(s) 113
HpyAV CCTTC 3 cut(s) 4, 115, 233
HpyCH4III ACNGT 2 cut(s) 23, 29
HpyCH4V TGCA 2 cut(s) 244, 279
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 1 cut(s) 249
Hsp92II CATG 4 cut(s) 220, 248, 322, 337
LmnI GCTCC 3 cut(s) 76, 235, 328
LpnPI CCDG 3 cut(s) 65, 218, 339
LweI GCATC 1 cut(s) 175
MaeIII GTNAC 1 cut(s) 23
MhlI GDGCHC 1 cut(s) 108
MluCI AATT 3 cut(s) 261, 313, 343
MnlI CCTC 3 cut(s) 79, 109, 145
MwoI GCNNNNNNNGC 1 cut(s) 11
NcoI CCATGG 1 cut(s) 333
NlaIII CATG 4 cut(s) 220, 248, 322, 337
NlaIV GGNNCC 1 cut(s) 324
NmeAIII GCCGAG 1 cut(s) 214
NmuCI GTSAC 1 cut(s) 23
NspI RCATGY 1 cut(s) 248
PaeI GCATGC 1 cut(s) 248
PaeR7I CTCGAG 1 cut(s) 203
PshAI GACNNNNGTC 1 cut(s) 335
PspN4I GGNNCC 1 cut(s) 324
SduI GDGCHC 1 cut(s) 108
SetI ASST 3 cut(s) 225, 290, 376
SfaNI GCATC 1 cut(s) 175
Sfr274I CTCGAG 1 cut(s) 203
SlaI CTCGAG 1 cut(s) 203
SmlI CTYRAG 1 cut(s) 203
SmoI CTYRAG 1 cut(s) 203
SphI GCATGC 1 cut(s) 248
Sse9I AATT 3 cut(s) 261, 313, 343
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 2 cut(s) 23, 29
TaqI TCGA 1 cut(s) 204
TasI AATT 3 cut(s) 261, 313, 343
TscAI CASTG 2 cut(s) 28, 34
TseFI GTSAC 1 cut(s) 23
Tsp45I GTSAC 1 cut(s) 23
TspDTI ATGAA 3 cut(s) 23, 233, 307
TspGWI ACGGA 1 cut(s) 367
TspRI CASTG 2 cut(s) 28, 34
XapI RAATTY 1 cut(s) 313
XceI RCATGY 1 cut(s) 248
XhoI CTCGAG 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.