Domain of unknown function (DUF4378)
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g08700 pycom07g08850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1227 |
| AatII | GACGTC | 1 cut(s) | 987 |
| Acc36I | ACCTGC | 1 cut(s) | 214 |
| Acc65I | GGTACC | 1 cut(s) | 367 |
| AccB1I | GGYRCC | 1 cut(s) | 367 |
| AccI | GTMKAC | 2 cut(s) | 239, 683 |
| AciI | CCGC | 1 cut(s) | 741 |
| AclWI | GGATC | 1 cut(s) | 13 |
| AcoI | YGGCCR | 1 cut(s) | 927 |
| AcyI | GRCGYC | 1 cut(s) | 984 |
| AfaI | GTAC | 2 cut(s) | 324, 369 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 319 |
| AflIII | ACRYGT | 3 cut(s) | 572, 734, 899 |
| AgsI | TTSAA | 7 cut(s) | 37, 307, 426, 1002, 1069, 1175, 1303 |
| AlwI | GGATC | 1 cut(s) | 13 |
| AoxI | GGCC | 3 cut(s) | 927, 990, 1138 |
| ApaI | GGGCCC | 1 cut(s) | 994 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 665, 681, 697, 713 |
| AseI | ATTAAT | 1 cut(s) | 1106 |
| Asp718I | GGTACC | 1 cut(s) | 367 |
| AspS9I | GGNCC | 3 cut(s) | 990, 991, 1139 |
| BaeGI | GKGCMC | 2 cut(s) | 994, 1262 |
| BanI | GGYRCC | 1 cut(s) | 367 |
| BanII | GRGCYC | 1 cut(s) | 994 |
| BauI | CACGAG | 1 cut(s) | 961 |
| BceAI | ACGGC | 2 cut(s) | 914, 1057 |
| BclI | TGATCA | 1 cut(s) | 73 |
| BfaI | CTAG | 3 cut(s) | 296, 1136, 1205 |
| BfuAI | ACCTGC | 1 cut(s) | 214 |
| BmgT120I | GGNCC | 3 cut(s) | 990, 991, 1139 |
| BmiI | GGNNCC | 3 cut(s) | 369, 992, 993 |
| BmsI | GCATC | 1 cut(s) | 646 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 955, 987 |
| BsaHI | GRCGYC | 1 cut(s) | 984 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 632, 662 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 319 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 319 |
| BseRI | GAGGAG | 1 cut(s) | 104 |
| BseSI | GKGCMC | 2 cut(s) | 994, 1262 |
| BseX3I | CGGCCG | 1 cut(s) | 927 |
| Bsh1285I | CGRYCG | 1 cut(s) | 930 |
| BshFI | GGCC | 3 cut(s) | 929, 992, 1140 |
| BshNI | GGYRCC | 1 cut(s) | 367 |
| BsiEI | CGRYCG | 1 cut(s) | 930 |
| BsiSI | CCGG | 1 cut(s) | 926 |
| BslFI | GGGAC | 4 cut(s) | 366, 683, 758, 1074 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 319 |
| BsmFI | GGGAC | 4 cut(s) | 366, 683, 758, 1074 |
| BsnI | GGCC | 3 cut(s) | 929, 992, 1140 |
| Bsp120I | GGGCCC | 1 cut(s) | 990 |
| Bsp1286I | GDGCHC | 2 cut(s) | 994, 1262 |
| Bsp143I | GATC | 2 cut(s) | 5, 73 |
| BspACI | CCGC | 1 cut(s) | 741 |
| BspANI | GGCC | 3 cut(s) | 929, 992, 1140 |
| BspLI | GGNNCC | 3 cut(s) | 369, 992, 993 |
| BspMI | ACCTGC | 1 cut(s) | 214 |
| BspPI | GGATC | 1 cut(s) | 13 |
| BspT107I | GGYRCC | 1 cut(s) | 367 |
| BssMI | GATC | 2 cut(s) | 5, 73 |
| BssNI | GRCGYC | 1 cut(s) | 984 |
| BssSI | CACGAG | 1 cut(s) | 961 |
| Bst2BI | CACGAG | 1 cut(s) | 961 |
| Bst4CI | ACNGT | 3 cut(s) | 217, 322, 958 |
| BstACI | GRCGYC | 1 cut(s) | 984 |
| BstC8I | GCNNGC | 1 cut(s) | 211 |
| BstDEI | CTNAG | 1 cut(s) | 89 |
| BstKTI | GATC | 2 cut(s) | 8, 76 |
| BstMBI | GATC | 2 cut(s) | 5, 73 |
| BstMCI | CGRYCG | 1 cut(s) | 930 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1257 |
| BstNSI | RCATGY | 5 cut(s) | 213, 576, 738, 903, 918 |
| BstSLI | GKGCMC | 2 cut(s) | 994, 1262 |
| BstZI | CGGCCG | 1 cut(s) | 927 |
| BsuRI | GGCC | 3 cut(s) | 929, 992, 1140 |
| BtsIMutI | CAGTG | 1 cut(s) | 954 |
| BveI | ACCTGC | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 1 cut(s) | 211 |
| Cfr13I | GGNCC | 3 cut(s) | 990, 991, 1139 |
| CseI | GACGC | 1 cut(s) | 583 |
| Csp6I | GTAC | 2 cut(s) | 323, 368 |
| CviAII | CATG | 5 cut(s) | 210, 573, 735, 900, 915 |
| CviJI | RGCY | 8 cut(s) | 226, 929, 966, 992, 1072, 1135, 1140, 1251 |
| CviKI_1 | RGCY | 8 cut(s) | 226, 929, 966, 992, 1072, 1135, 1140, 1251 |
| CviQI | GTAC | 2 cut(s) | 323, 368 |
| DdeI | CTNAG | 1 cut(s) | 89 |
| DpnI | GATC | 2 cut(s) | 7, 75 |
| DpnII | GATC | 2 cut(s) | 5, 73 |
| EaeI | YGGCCR | 1 cut(s) | 927 |
| EagI | CGGCCG | 1 cut(s) | 927 |
| EclXI | CGGCCG | 1 cut(s) | 927 |
| Eco24I | GRGCYC | 1 cut(s) | 994 |
| Eco32I | GATATC | 1 cut(s) | 715 |
| Eco52I | CGGCCG | 1 cut(s) | 927 |
| EcoO109I | RGGNCCY | 1 cut(s) | 991 |
| EcoRV | GATATC | 1 cut(s) | 715 |
| EcoT22I | ATGCAT | 1 cut(s) | 639 |
| EcoT38I | GRGCYC | 1 cut(s) | 994 |
| FaeI | CATG | 5 cut(s) | 213, 576, 738, 903, 918 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1283 |
| FaqI | GGGAC | 4 cut(s) | 366, 683, 758, 1074 |
| FatI | CATG | 5 cut(s) | 209, 572, 734, 899, 914 |
| FauI | CCCGC | 1 cut(s) | 734 |
| FauNDI | CATATG | 2 cut(s) | 494, 770 |
| FbaI | TGATCA | 1 cut(s) | 73 |
| FblI | GTMKAC | 2 cut(s) | 239, 683 |
| FriOI | GRGCYC | 1 cut(s) | 994 |
| FspBI | CTAG | 3 cut(s) | 296, 1136, 1205 |
| HaeIII | GGCC | 3 cut(s) | 929, 992, 1140 |
| HapII | CCGG | 1 cut(s) | 926 |
| HgaI | GACGC | 1 cut(s) | 583 |
| Hin1I | GRCGYC | 1 cut(s) | 984 |
| Hin1II | CATG | 5 cut(s) | 213, 576, 738, 903, 918 |
| HincII | GTYRAC | 2 cut(s) | 220, 240 |
| HindII | GTYRAC | 2 cut(s) | 220, 240 |
| HinfI | GANTC | 3 cut(s) | 422, 601, 1034 |
| HpaII | CCGG | 1 cut(s) | 926 |
| Hpy166II | GTNNAC | 6 cut(s) | 220, 240, 559, 684, 820, 843 |
| Hpy188I | TCNGA | 2 cut(s) | 251, 667 |
| Hpy188III | TCNNGA | 5 cut(s) | 313, 598, 961, 1031, 1091 |
| Hpy8I | GTNNAC | 6 cut(s) | 220, 240, 559, 684, 820, 843 |
| Hpy99I | CGWCG | 2 cut(s) | 244, 935 |
| HpyAV | CCTTC | 4 cut(s) | 269, 279, 711, 977 |
| HpyCH4III | ACNGT | 3 cut(s) | 217, 322, 958 |
| HpyCH4IV | ACGT | 3 cut(s) | 242, 269, 984 |
| HpyCH4V | TGCA | 6 cut(s) | 209, 213, 291, 637, 727, 1168 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1257 |
| HpyF3I | CTNAG | 1 cut(s) | 89 |
| HpySE526I | ACGT | 3 cut(s) | 242, 269, 984 |
| Hsp92I | GRCGYC | 1 cut(s) | 984 |
| Hsp92II | CATG | 5 cut(s) | 213, 576, 738, 903, 918 |
| KpnI | GGTACC | 1 cut(s) | 371 |
| Ksp22I | TGATCA | 1 cut(s) | 73 |
| Kzo9I | GATC | 2 cut(s) | 5, 73 |
| LpnPI | CCDG | 7 cut(s) | 219, 326, 896, 939, 973, 1044, 1288 |
| LweI | GCATC | 1 cut(s) | 646 |
| MaeI | CTAG | 3 cut(s) | 296, 1136, 1205 |
| MaeII | ACGT | 3 cut(s) | 242, 269, 984 |
| MaeIII | GTNAC | 3 cut(s) | 595, 958, 980 |
| MalI | GATC | 2 cut(s) | 7, 75 |
| MboI | GATC | 2 cut(s) | 5, 73 |
| MboII | GAAGA | 1 cut(s) | 147 |
| MhlI | GDGCHC | 2 cut(s) | 994, 1262 |
| MnlI | CCTC | 7 cut(s) | 125, 237, 340, 658, 953, 981, 1278 |
| Mph1103I | ATGCAT | 1 cut(s) | 639 |
| MseI | TTAA | 9 cut(s) | 417, 441, 479, 531, 731, 756, 803, 1025, 1106 |
| MspI | CCGG | 1 cut(s) | 926 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1257 |
| NdeI | CATATG | 2 cut(s) | 494, 770 |
| NdeII | GATC | 2 cut(s) | 5, 73 |
| NlaIII | CATG | 5 cut(s) | 213, 576, 738, 903, 918 |
| NlaIV | GGNNCC | 3 cut(s) | 369, 992, 993 |
| NmuCI | GTSAC | 3 cut(s) | 595, 958, 980 |
| NsiI | ATGCAT | 1 cut(s) | 639 |
| NspI | RCATGY | 5 cut(s) | 213, 576, 738, 903, 918 |
| PaeI | GCATGC | 1 cut(s) | 213 |
| PciI | ACATGT | 3 cut(s) | 572, 734, 899 |
| PfeI | GAWTC | 3 cut(s) | 422, 601, 1034 |
| PscI | ACATGT | 3 cut(s) | 572, 734, 899 |
| PshBI | ATTAAT | 1 cut(s) | 1106 |
| PsiI | TTATAA | 1 cut(s) | 1227 |
| PspN4I | GGNNCC | 3 cut(s) | 369, 992, 993 |
| PspOMI | GGGCCC | 1 cut(s) | 990 |
| PspPI | GGNCC | 3 cut(s) | 990, 991, 1139 |
| RsaI | GTAC | 2 cut(s) | 324, 369 |
| RsaNI | GTAC | 2 cut(s) | 323, 368 |
| SalI | GTCGAC | 1 cut(s) | 238 |
| SaqAI | TTAA | 9 cut(s) | 417, 441, 479, 531, 731, 756, 803, 1025, 1106 |
| Sau3AI | GATC | 2 cut(s) | 5, 73 |
| Sau96I | GGNCC | 3 cut(s) | 990, 991, 1139 |
| SduI | GDGCHC | 2 cut(s) | 994, 1262 |
| SfaNI | GCATC | 1 cut(s) | 646 |
| SphI | GCATGC | 1 cut(s) | 213 |
| SsiI | CCGC | 1 cut(s) | 741 |
| SspI | AATATT | 3 cut(s) | 458, 1014, 1212 |
| SspMI | CTAG | 3 cut(s) | 296, 1136, 1205 |
| TaaI | ACNGT | 3 cut(s) | 217, 322, 958 |
| TaiI | ACGT | 3 cut(s) | 245, 272, 987 |
| TaqI | TCGA | 3 cut(s) | 239, 717, 933 |
| TfiI | GAWTC | 3 cut(s) | 422, 601, 1034 |
| Tru1I | TTAA | 9 cut(s) | 417, 441, 479, 531, 731, 756, 803, 1025, 1106 |
| Tru9I | TTAA | 9 cut(s) | 417, 441, 479, 531, 731, 756, 803, 1025, 1106 |
| TscAI | CASTG | 1 cut(s) | 961 |
| TseFI | GTSAC | 3 cut(s) | 595, 958, 980 |
| Tsp45I | GTSAC | 3 cut(s) | 595, 958, 980 |
| TspDTI | ATGAA | 4 cut(s) | 325, 537, 860, 1210 |
| TspRI | CASTG | 1 cut(s) | 961 |
| VspI | ATTAAT | 1 cut(s) | 1106 |
| XceI | RCATGY | 5 cut(s) | 213, 576, 738, 903, 918 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1127 |
| XmiI | GTMKAC | 2 cut(s) | 239, 683 |
| XspI | CTAG | 3 cut(s) | 296, 1136, 1205 |
| ZraI | GACGTC | 1 cut(s) | 985 |
| Zsp2I | ATGCAT | 1 cut(s) | 639 |