pycom07g09440

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
8713540 .. 8714104
565 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 498 bp
ATGCTCCAAACGCCAGACCCGCCATGCCAGAGCACCACCTCACGAGCTCAGAGCAGCAGCAACAACAACCACCGCGACGGTTTACAAGAAGTGCGGCGGAGAGAGAAAAGACAGGGCACAATTGCTCCGTTCTGTCGACCATTGGCCACCCCGCCAGTCCGGAAGAACTTGCTTCGCGATGCCGATCGATCCGATGCGACTGCAGACATTGTTCCGAGGCTGTGTTCGATCCCTAACTCTCCAATTTATTTGGCGGATAAGGGACTGGTGTCAGCGGAGGCGGTTTCGGCTTCAGGGGAGTTCGTGCCCGATACAATGCGGAATGGTAATGTGAAGGCATACTCTAGGAAACGGAAAAAGCAGGTTTCGAACAATGCGGGGGTGCCGACGGCGGCGAAAAGGAGATTGCATTTACCAACAGAGAATGGTATGAAACTTTGTGTGTTTCAAATTTTGAATTTTCGTTGCTTTTATTGCAACTTATTTCGTATTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
Pkinase

Protein Analysis

166

Amino Acids

18.43

Weight (kDa)

10.16

Isoelectric Point (pI)

54.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 352
AccB1I GGYRCC 1 cut(s) 382
AccI GTMKAC 1 cut(s) 136
AccII CGCG 2 cut(s) 75, 177
AccIII TCCGGA 1 cut(s) 159
AclWI GGATC 2 cut(s) 183, 223
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 2 cut(s) 450, 457
AcuI CTGAAG 1 cut(s) 276
AgsI TTSAA 2 cut(s) 449, 457
AluBI AGCT 1 cut(s) 47
AluI AGCT 1 cut(s) 47
Alw21I GWGCWC 2 cut(s) 35, 49
AlwI GGATC 2 cut(s) 183, 223
Aor13HI TCCGGA 1 cut(s) 159
AoxI GGCC 1 cut(s) 144
ApeKI GCWGC 2 cut(s) 54, 57
ApoI RAATTY 2 cut(s) 450, 457
AseI ATTAAT 1 cut(s) 492
AsuII TTCGAA 1 cut(s) 368
BaeGI GKGCMC 2 cut(s) 119, 309
BalI TGGCCA 1 cut(s) 146
BanI GGYRCC 1 cut(s) 382
BanII GRGCYC 1 cut(s) 49
BauI CACGAG 1 cut(s) 42
Bbv12I GWGCWC 2 cut(s) 35, 49
BbvI GCAGC 2 cut(s) 66, 69
BceAI ACGGC 1 cut(s) 405
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BfaI CTAG 1 cut(s) 345
BfmI CTRYAG 1 cut(s) 201
BfuAI ACCTGC 1 cut(s) 352
BisI GCNGC 4 cut(s) 55, 58, 95, 393
BlsI GCNGC 4 cut(s) 56, 59, 96, 394
BmiI GGNNCC 1 cut(s) 384
BmsI GCATC 2 cut(s) 169, 184
BoxI GACNNNNGTC 1 cut(s) 268
Bpu14I TTCGAA 1 cut(s) 368
Bsa29I ATCGAT 1 cut(s) 187
BsaBI GATNNNNATC 1 cut(s) 183
BsaJI CCNNGG 1 cut(s) 215
BsaWI WCCGGW 1 cut(s) 159
BsaXI ACNNNNNCTCC 2 cut(s) 109, 139
Bse1I ACTGG 2 cut(s) 155, 270
Bse8I GATNNNNATC 1 cut(s) 183
BseAI TCCGGA 1 cut(s) 159
BseCI ATCGAT 1 cut(s) 187
BseDI CCNNGG 1 cut(s) 215
BseJI GATNNNNATC 1 cut(s) 183
BseMII CTCAG 1 cut(s) 62
BseNI ACTGG 2 cut(s) 155, 270
BseSI GKGCMC 2 cut(s) 119, 309
BseXI GCAGC 2 cut(s) 66, 69
Bsh1236I CGCG 2 cut(s) 75, 177
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 1 cut(s) 146
BshNI GGYRCC 1 cut(s) 382
BshVI ATCGAT 1 cut(s) 187
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 35, 49
BsiSI CCGG 1 cut(s) 160
BslFI GGGAC 1 cut(s) 276
BsmFI GGGAC 1 cut(s) 276
BsnI GGCC 1 cut(s) 146
Bsp119I TTCGAA 1 cut(s) 368
Bsp1286I GDGCHC 4 cut(s) 35, 49, 119, 309
Bsp13I TCCGGA 1 cut(s) 159
Bsp143I GATC 3 cut(s) 184, 188, 228
Bsp68I TCGCGA 1 cut(s) 177
BspANI GGCC 1 cut(s) 146
BspCNI CTCAG 1 cut(s) 61
BspDI ATCGAT 1 cut(s) 187
BspEI TCCGGA 1 cut(s) 159
BspFNI CGCG 2 cut(s) 75, 177
BspLI GGNNCC 1 cut(s) 384
BspMAI CTGCAG 1 cut(s) 205
BspMI ACCTGC 1 cut(s) 352
BspPI GGATC 2 cut(s) 183, 223
BspT104I TTCGAA 1 cut(s) 368
BspT107I GGYRCC 1 cut(s) 382
BsrI ACTGG 2 cut(s) 155, 270
BssECI CCNNGG 1 cut(s) 215
BssMI GATC 3 cut(s) 184, 188, 228
BssSI CACGAG 1 cut(s) 42
Bst2BI CACGAG 1 cut(s) 42
Bst4CI ACNGT 1 cut(s) 80
BstBI TTCGAA 1 cut(s) 368
BstDEI CTNAG 1 cut(s) 48
BstFNI CGCG 2 cut(s) 75, 177
BstKTI GATC 3 cut(s) 187, 191, 231
BstMBI GATC 3 cut(s) 184, 188, 228
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 4 cut(s) 10, 19, 287, 474
BstPAI GACNNNNGTC 1 cut(s) 268
BstSFI CTRYAG 1 cut(s) 201
BstSLI GKGCMC 2 cut(s) 119, 309
BstUI CGCG 2 cut(s) 75, 177
BstV1I GCAGC 2 cut(s) 66, 69
Bsu15I ATCGAT 1 cut(s) 187
BsuRI GGCC 1 cut(s) 146
BsuTUI ATCGAT 1 cut(s) 187
BtgZI GCGATG 1 cut(s) 192
BtuMI TCGCGA 1 cut(s) 177
BveI ACCTGC 1 cut(s) 352
ClaI ATCGAT 1 cut(s) 187
CviAII CATG 1 cut(s) 24
CviJI RGCY 4 cut(s) 47, 146, 220, 290
CviKI_1 RGCY 4 cut(s) 47, 146, 220, 290
DdeI CTNAG 1 cut(s) 48
DpnI GATC 3 cut(s) 186, 190, 230
DpnII GATC 3 cut(s) 184, 188, 228
EaeI YGGCCR 1 cut(s) 144
EciI GGCGGA 2 cut(s) 112, 269
Ecl136II GAGCTC 1 cut(s) 47
Eco24I GRGCYC 1 cut(s) 49
Eco53kI GAGCTC 1 cut(s) 47
Eco57I CTGAAG 1 cut(s) 276
EcoICRI GAGCTC 1 cut(s) 47
EcoT38I GRGCYC 1 cut(s) 49
FaeI CATG 1 cut(s) 27
FaiI YATR 3 cut(s) 25, 340, 431
FaqI GGGAC 1 cut(s) 276
FatI CATG 1 cut(s) 23
FauI CCCGC 3 cut(s) 27, 159, 370
FblI GTMKAC 1 cut(s) 136
Fnu4HI GCNGC 4 cut(s) 55, 58, 95, 393
FriOI GRGCYC 1 cut(s) 49
Fsp4HI GCNGC 4 cut(s) 55, 58, 95, 393
FspBI CTAG 1 cut(s) 345
GluI GCNGC 4 cut(s) 55, 58, 95, 393
HaeIII GGCC 1 cut(s) 146
HapII CCGG 1 cut(s) 160
Hin1II CATG 1 cut(s) 27
HincII GTYRAC 1 cut(s) 137
HindII GTYRAC 1 cut(s) 137
HpaII CCGG 1 cut(s) 160
Hpy166II GTNNAC 2 cut(s) 83, 137
Hpy188I TCNGA 3 cut(s) 51, 193, 216
Hpy188III TCNNGA 3 cut(s) 42, 160, 176
Hpy8I GTNNAC 2 cut(s) 83, 137
Hpy99I CGWCG 2 cut(s) 80, 391
HpyAV CCTTC 1 cut(s) 328
HpyCH4III ACNGT 1 cut(s) 80
HpyCH4V TGCA 3 cut(s) 203, 409, 477
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 19, 287, 474
HpyF3I CTNAG 1 cut(s) 48
Hsp92II CATG 1 cut(s) 27
Kpn2I TCCGGA 1 cut(s) 159
Kzo9I GATC 3 cut(s) 184, 188, 228
LmnI GCTCC 2 cut(s) 9, 130
LpnPI CCDG 8 cut(s) 27, 41, 98, 168, 173, 251, 279, 347
Lsp1109I GCAGC 2 cut(s) 66, 69
LweI GCATC 2 cut(s) 169, 184
MaeI CTAG 1 cut(s) 345
MalI GATC 3 cut(s) 186, 190, 230
MboI GATC 3 cut(s) 184, 188, 228
MboII GAAGA 1 cut(s) 175
MfeI CAATTG 1 cut(s) 120
MhlI GDGCHC 4 cut(s) 35, 49, 119, 309
MlsI TGGCCA 1 cut(s) 146
MluCI AATT 5 cut(s) 120, 243, 450, 457, 493
MluNI TGGCCA 1 cut(s) 146
MnlI CCTC 3 cut(s) 49, 210, 271
Mox20I TGGCCA 1 cut(s) 146
MroI TCCGGA 1 cut(s) 159
MscI TGGCCA 1 cut(s) 146
MseI TTAA 1 cut(s) 492
Msp20I TGGCCA 1 cut(s) 146
MspA1I CMGCKG 1 cut(s) 275
MspI CCGG 1 cut(s) 160
MunI CAATTG 1 cut(s) 120
MvnI CGCG 2 cut(s) 75, 177
MwoI GCNNNNNNNGC 4 cut(s) 10, 19, 287, 474
NdeII GATC 3 cut(s) 184, 188, 228
NlaIII CATG 1 cut(s) 27
NlaIV GGNNCC 1 cut(s) 384
NruI TCGCGA 1 cut(s) 177
NspV TTCGAA 1 cut(s) 368
PkrI GCNGC 4 cut(s) 56, 59, 96, 394
Ple19I CGATCG 1 cut(s) 187
PshAI GACNNNNGTC 1 cut(s) 268
PshBI ATTAAT 1 cut(s) 492
Psp124BI GAGCTC 1 cut(s) 49
PspN4I GGNNCC 1 cut(s) 384
PstI CTGCAG 1 cut(s) 205
PvuI CGATCG 1 cut(s) 187
RruI TCGCGA 1 cut(s) 177
SacI GAGCTC 1 cut(s) 49
SalI GTCGAC 1 cut(s) 135
SaqAI TTAA 1 cut(s) 492
SatI GCNGC 4 cut(s) 55, 58, 95, 393
Sau3AI GATC 3 cut(s) 184, 188, 228
SduI GDGCHC 4 cut(s) 35, 49, 119, 309
SetI ASST 3 cut(s) 41, 49, 366
SfaNI GCATC 2 cut(s) 169, 184
SfcI CTRYAG 1 cut(s) 201
SfuI TTCGAA 1 cut(s) 368
Sse9I AATT 5 cut(s) 120, 243, 450, 457, 493
SspMI CTAG 1 cut(s) 345
SstI GAGCTC 1 cut(s) 49
TaaI ACNGT 1 cut(s) 80
TaqI TCGA 4 cut(s) 136, 187, 227, 368
TasI AATT 5 cut(s) 120, 243, 450, 457, 493
TauI GCSGC 2 cut(s) 97, 395
Tru1I TTAA 1 cut(s) 492
Tru9I TTAA 1 cut(s) 492
TseI GCWGC 2 cut(s) 54, 57
TspDTI ATGAA 1 cut(s) 446
TspGWI ACGGA 2 cut(s) 117, 367
VspI ATTAAT 1 cut(s) 492
XapI RAATTY 2 cut(s) 450, 457
XmiI GTMKAC 1 cut(s) 136
XspI CTAG 1 cut(s) 345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.