pycom07g10220

Hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
10060241 .. 10061032
792 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 225 bp
ATGCTGTGTGGCATGGTCAGGGATGCTTTACGGCCAGATCGGTCTTCTTCCACACATTTTGGACTCCCAAGGTGCGGAATCCAACCAAGAAAAACTTTGTTCACTGGTATGATGCATCTGATGGATCATGAAAAGGTGAACGATTATCTTTCAAAATTGAAGGAAACAGAGGGTCTTGATGTACAACTGAGCTATGATGGACTTCGTGTACCAGTAACGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.44

Weight (kDa)

7.84

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 75
AclI AACGTT 1 cut(s) 218
AclWI GGATC 1 cut(s) 132
AcoI YGGCCR 1 cut(s) 32
AfaI GTAC 2 cut(s) 183, 210
AfiI CCNNNNNNNGG 1 cut(s) 74
AgsI TTSAA 2 cut(s) 153, 160
AluBI AGCT 1 cut(s) 192
AluI AGCT 1 cut(s) 192
AlwI GGATC 1 cut(s) 132
AoxI GGCC 1 cut(s) 32
AsuHPI GGTGA 1 cut(s) 148
BbsI GAAGAC 1 cut(s) 36
BccI CCATC 2 cut(s) 115, 191
BceAI ACGGC 1 cut(s) 47
BfaI CTAG 1 cut(s) 223
BmsI GCATC 3 cut(s) 13, 102, 124
BpiI GAAGAC 1 cut(s) 36
BsaJI CCNNGG 1 cut(s) 68
Bsc4I CCNNNNNNNGG 1 cut(s) 74
Bse1I ACTGG 2 cut(s) 109, 212
BseDI CCNNGG 1 cut(s) 68
BseGI GGATG 1 cut(s) 28
BseLI CCNNNNNNNGG 1 cut(s) 74
BseMII CTCAG 1 cut(s) 179
BseNI ACTGG 2 cut(s) 109, 212
BshFI GGCC 1 cut(s) 34
BslI CCNNNNNNNGG 1 cut(s) 74
BsnI GGCC 1 cut(s) 34
Bsp1407I TGTACA 1 cut(s) 181
Bsp143I GATC 2 cut(s) 37, 124
BspACI CCGC 1 cut(s) 75
BspANI GGCC 1 cut(s) 34
BspCNI CTCAG 1 cut(s) 180
BspHI TCATGA 1 cut(s) 127
BspPI GGATC 1 cut(s) 132
BsrGI TGTACA 1 cut(s) 181
BsrI ACTGG 2 cut(s) 109, 212
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 2 cut(s) 37, 124
BssT1I CCWWGG 1 cut(s) 68
BstAUI TGTACA 1 cut(s) 181
BstDEI CTNAG 1 cut(s) 188
BstF5I GGATG 1 cut(s) 28
BstKTI GATC 2 cut(s) 40, 127
BstMBI GATC 2 cut(s) 37, 124
BstV2I GAAGAC 1 cut(s) 36
BsuRI GGCC 1 cut(s) 34
BtsCI GGATG 1 cut(s) 28
BtsIMutI CAGTG 1 cut(s) 102
CciI TCATGA 1 cut(s) 127
Csp6I GTAC 2 cut(s) 182, 209
CspCI CAANNNNNGTGG 2 cut(s) 40, 75
CviAII CATG 2 cut(s) 13, 128
CviJI RGCY 2 cut(s) 34, 192
CviKI_1 RGCY 2 cut(s) 34, 192
CviQI GTAC 2 cut(s) 182, 209
DdeI CTNAG 1 cut(s) 188
DpnI GATC 2 cut(s) 39, 126
DpnII GATC 2 cut(s) 37, 124
EaeI YGGCCR 1 cut(s) 32
Eco130I CCWWGG 1 cut(s) 68
EcoT14I CCWWGG 1 cut(s) 68
EcoT22I ATGCAT 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 2 cut(s) 16, 131
FaiI YATR 4 cut(s) 14, 110, 129, 195
FalI AAGNNNNNCTT 2 cut(s) 79, 111
FatI CATG 2 cut(s) 12, 127
FokI GGATG 1 cut(s) 35
FspBI CTAG 1 cut(s) 223
HaeIII GGCC 1 cut(s) 34
Hin1II CATG 2 cut(s) 16, 131
HinfI GANTC 2 cut(s) 63, 78
HphI GGTGA 1 cut(s) 148
Hpy166II GTNNAC 3 cut(s) 102, 139, 209
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 2 cut(s) 128, 176
Hpy8I GTNNAC 3 cut(s) 102, 139, 209
HpyAV CCTTC 1 cut(s) 154
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 1 cut(s) 115
HpyF3I CTNAG 1 cut(s) 188
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 16, 131
Kzo9I GATC 2 cut(s) 37, 124
LpnPI CCDG 3 cut(s) 4, 48, 90
LweI GCATC 3 cut(s) 13, 102, 124
MaeI CTAG 1 cut(s) 223
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 1 cut(s) 214
MalI GATC 2 cut(s) 39, 126
MboI GATC 2 cut(s) 37, 124
MboII GAAGA 2 cut(s) 36, 39
MluCI AATT 1 cut(s) 155
MlyI GAGTC 1 cut(s) 57
MmeI TCCRAC 1 cut(s) 106
MnlI CCTC 1 cut(s) 163
Mph1103I ATGCAT 1 cut(s) 117
MslI CAYNNNNRTG 1 cut(s) 107
NdeII GATC 2 cut(s) 37, 124
NlaIII CATG 2 cut(s) 16, 131
NsiI ATGCAT 1 cut(s) 117
PagI TCATGA 1 cut(s) 127
PfeI GAWTC 1 cut(s) 78
PleI GAGTC 1 cut(s) 57
PpsI GAGTC 1 cut(s) 57
Psp1406I AACGTT 1 cut(s) 218
RsaI GTAC 2 cut(s) 183, 210
RsaNI GTAC 2 cut(s) 182, 209
RseI CAYNNNNRTG 1 cut(s) 107
Sau3AI GATC 2 cut(s) 37, 124
SchI GAGTC 1 cut(s) 57
SetI ASST 4 cut(s) 74, 138, 194, 221
SfaNI GCATC 3 cut(s) 13, 102, 124
SgeI CNNG 9 cut(s) 25, 31, 47, 81, 99, 117, 140, 188, 218
SmiMI CAYNNNNRTG 1 cut(s) 107
Sse9I AATT 1 cut(s) 155
SsiI CCGC 1 cut(s) 75
SspMI CTAG 1 cut(s) 223
StyI CCWWGG 1 cut(s) 68
TaiI ACGT 1 cut(s) 221
TaqII GACCGA 1 cut(s) 30
TasI AATT 1 cut(s) 155
TatI WGTACW 1 cut(s) 181
TfiI GAWTC 1 cut(s) 78
TscAI CASTG 1 cut(s) 109
TspDTI ATGAA 1 cut(s) 144
TspRI CASTG 1 cut(s) 109
XspI CTAG 1 cut(s) 223
Zsp2I ATGCAT 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.