pycom07g12200

BON1-associated protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
13474380 .. 13474721
342 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 342 bp
ATGGCAGTCAATTCCCGGACGCTCGAAATCAAGGTGATCTCCGCCGAGAACCTGCAATTAGATCGAAAACCCACTAAGAAAAACGCCTCCGTGGCCGTCCGGAGTGACATCAACACCCAGTTCCGCACCAAGGACATGGACACCAAAGGCGGGGGCCCACCCACGGTGGAACGAGAAGCTCATGCTCGACTTGCCAACGCACTCGAAGTCCATCACGGTGGAGGTCCAATGCAAGACTTCGTCCGGTGTCAGGACGATCGGGACGGCGACGATTCCAGCATCGGATTTTGTTGGCGGTTAAGTGCCGGAGGGTTACCTGCATTTTTTAAGTTACAGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2

Protein Analysis

114

Amino Acids

12.37

Weight (kDa)

7.83

Isoelectric Point (pI)

29.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 60, 325
AccIII TCCGGA 1 cut(s) 99
AciI CCGC 4 cut(s) 42, 124, 150, 295
AcoI YGGCCR 1 cut(s) 93
AfiI CCNNNNNNNGG 4 cut(s) 130, 150, 163, 250
AluBI AGCT 1 cut(s) 179
AluI AGCT 1 cut(s) 179
Aor13HI TCCGGA 1 cut(s) 99
AoxI GGCC 2 cut(s) 93, 154
ApaI GGGCCC 1 cut(s) 158
AspS9I GGNCC 3 cut(s) 154, 155, 224
AsuC2I CCSGG 1 cut(s) 16
AsuHPI GGTGA 1 cut(s) 46
AvaII GGWCC 1 cut(s) 224
BaeGI GKGCMC 1 cut(s) 158
BanII GRGCYC 1 cut(s) 158
BccI CCATC 1 cut(s) 219
BceAI ACGGC 2 cut(s) 80, 280
BcgI CGANNNNNNTGC 2 cut(s) 44, 78
BcnI CCSGG 1 cut(s) 16
BfuAI ACCTGC 2 cut(s) 60, 325
BglI GCCNNNNNGGC 1 cut(s) 92
Bme1390I CCNGG 1 cut(s) 16
Bme18I GGWCC 1 cut(s) 224
BmgT120I GGNCC 3 cut(s) 154, 155, 224
BmiI GGNNCC 2 cut(s) 155, 156
BmrFI CCNGG 1 cut(s) 16
BmrI ACTGGG 1 cut(s) 112
BmsI GCATC 1 cut(s) 288
BmuI ACTGGG 1 cut(s) 112
BpuMI CCSGG 1 cut(s) 16
BsaJI CCNNGG 3 cut(s) 90, 129, 162
BsaWI WCCGGW 2 cut(s) 99, 243
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 150, 163, 250
Bse1I ACTGG 1 cut(s) 118
BseAI TCCGGA 1 cut(s) 99
BseDI CCNNGG 3 cut(s) 90, 129, 162
BseLI CCNNNNNNNGG 4 cut(s) 130, 150, 163, 250
BseNI ACTGG 1 cut(s) 118
BseSI GKGCMC 1 cut(s) 158
Bsh1285I CGRYCG 1 cut(s) 259
BshFI GGCC 2 cut(s) 95, 156
BsiEI CGRYCG 1 cut(s) 259
BsiSI CCGG 4 cut(s) 16, 100, 244, 306
BslFI GGGAC 1 cut(s) 275
BslI CCNNNNNNNGG 4 cut(s) 130, 150, 163, 250
BsmFI GGGAC 1 cut(s) 275
BsnI GGCC 2 cut(s) 95, 156
Bsp120I GGGCCC 1 cut(s) 154
Bsp1286I GDGCHC 1 cut(s) 158
Bsp13I TCCGGA 1 cut(s) 99
Bsp143I GATC 3 cut(s) 36, 61, 256
BspACI CCGC 4 cut(s) 42, 124, 150, 295
BspANI GGCC 2 cut(s) 95, 156
BspEI TCCGGA 1 cut(s) 99
BspLI GGNNCC 2 cut(s) 155, 156
BspMI ACCTGC 2 cut(s) 60, 325
BsrI ACTGG 1 cut(s) 118
BssECI CCNNGG 3 cut(s) 90, 129, 162
BssMI GATC 3 cut(s) 36, 61, 256
BssT1I CCWWGG 1 cut(s) 129
Bst4CI ACNGT 2 cut(s) 166, 218
BstDEI CTNAG 2 cut(s) 75, 339
BstDSI CCRYGG 2 cut(s) 90, 162
BstEII GGTNACC 1 cut(s) 312
BstKTI GATC 3 cut(s) 39, 64, 259
BstMBI GATC 3 cut(s) 36, 61, 256
BstMCI CGRYCG 1 cut(s) 259
BstMWI GCNNNNNNNGC 2 cut(s) 92, 191
BstPI GGTNACC 1 cut(s) 312
BstSCI CCNGG 1 cut(s) 14
BstSLI GKGCMC 1 cut(s) 158
BstXI CCANNNNNNTGG 2 cut(s) 136, 218
BsuRI GGCC 2 cut(s) 95, 156
BtgI CCRYGG 2 cut(s) 90, 162
BveI ACCTGC 2 cut(s) 60, 325
Cfr13I GGNCC 3 cut(s) 154, 155, 224
CseI GACGC 1 cut(s) 28
CviAII CATG 2 cut(s) 136, 182
CviJI RGCY 4 cut(s) 95, 156, 179, 338
CviKI_1 RGCY 4 cut(s) 95, 156, 179, 338
DdeI CTNAG 2 cut(s) 75, 339
DpnI GATC 3 cut(s) 38, 63, 258
DpnII GATC 3 cut(s) 36, 61, 256
EaeI YGGCCR 1 cut(s) 93
EciI GGCGGA 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 129
Eco24I GRGCYC 1 cut(s) 158
Eco47I GGWCC 1 cut(s) 224
Eco91I GGTNACC 1 cut(s) 312
EcoO109I RGGNCCY 1 cut(s) 154
EcoO65I GGTNACC 1 cut(s) 312
EcoT14I CCWWGG 1 cut(s) 129
EcoT38I GRGCYC 1 cut(s) 158
ErhI CCWWGG 1 cut(s) 129
FaeI CATG 2 cut(s) 139, 185
FaiI YATR 2 cut(s) 137, 183
FaqI GGGAC 1 cut(s) 275
FatI CATG 2 cut(s) 135, 181
FauI CCCGC 1 cut(s) 143
FriOI GRGCYC 1 cut(s) 158
HaeIII GGCC 2 cut(s) 95, 156
HapII CCGG 4 cut(s) 16, 100, 244, 306
HgaI GACGC 1 cut(s) 28
Hin1II CATG 2 cut(s) 139, 185
HinfI GANTC 1 cut(s) 272
HpaII CCGG 4 cut(s) 16, 100, 244, 306
HphI GGTGA 1 cut(s) 46
Hpy188I TCNGA 1 cut(s) 284
Hpy188III TCNNGA 3 cut(s) 100, 251, 260
Hpy99I CGWCG 1 cut(s) 272
HpyCH4III ACNGT 2 cut(s) 166, 218
HpyCH4V TGCA 3 cut(s) 55, 232, 320
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 191
HpyF3I CTNAG 2 cut(s) 75, 339
Hsp92II CATG 2 cut(s) 139, 185
Kpn2I TCCGGA 1 cut(s) 99
Kzo9I GATC 3 cut(s) 36, 61, 256
LweI GCATC 1 cut(s) 288
MaeIII GTNAC 3 cut(s) 104, 312, 330
MalI GATC 3 cut(s) 38, 63, 258
MboI GATC 3 cut(s) 36, 61, 256
MhlI GDGCHC 1 cut(s) 158
MluCI AATT 2 cut(s) 10, 56
MnlI CCTC 3 cut(s) 97, 215, 302
MroI TCCGGA 1 cut(s) 99
MseI TTAA 2 cut(s) 299, 327
MslI CAYNNNNRTG 1 cut(s) 216
MspI CCGG 4 cut(s) 16, 100, 244, 306
MspR9I CCNGG 1 cut(s) 16
MwoI GCNNNNNNNGC 2 cut(s) 92, 191
NciI CCSGG 1 cut(s) 16
NdeII GATC 3 cut(s) 36, 61, 256
NlaIII CATG 2 cut(s) 139, 185
NlaIV GGNNCC 2 cut(s) 155, 156
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 1 cut(s) 104
PfeI GAWTC 1 cut(s) 272
PflFI GACNNNGTC 1 cut(s) 239
PfoI TCCNGGA 1 cut(s) 14
Ple19I CGATCG 1 cut(s) 259
PspEI GGTNACC 1 cut(s) 312
PspN4I GGNNCC 2 cut(s) 155, 156
PspOMI GGGCCC 1 cut(s) 154
PspPI GGNCC 3 cut(s) 154, 155, 224
PsyI GACNNNGTC 1 cut(s) 239
PvuI CGATCG 1 cut(s) 259
RseI CAYNNNNRTG 1 cut(s) 216
SaqAI TTAA 2 cut(s) 299, 327
Sau3AI GATC 3 cut(s) 36, 61, 256
Sau96I GGNCC 3 cut(s) 154, 155, 224
ScrFI CCNGG 1 cut(s) 16
SduI GDGCHC 1 cut(s) 158
SetI ASST 5 cut(s) 36, 54, 181, 226, 319
SfaNI GCATC 1 cut(s) 288
SinI GGWCC 1 cut(s) 224
SmiMI CAYNNNNRTG 1 cut(s) 216
Sse9I AATT 2 cut(s) 10, 56
SsiI CCGC 4 cut(s) 42, 124, 150, 295
StyD4I CCNGG 1 cut(s) 14
StyI CCWWGG 1 cut(s) 129
TaaI ACNGT 2 cut(s) 166, 218
TaqI TCGA 4 cut(s) 24, 64, 187, 204
TasI AATT 2 cut(s) 10, 56
TfiI GAWTC 1 cut(s) 272
Tru1I TTAA 2 cut(s) 299, 327
Tru9I TTAA 2 cut(s) 299, 327
TseFI GTSAC 1 cut(s) 104
Tsp45I GTSAC 1 cut(s) 104
TspGWI ACGGA 1 cut(s) 79
Tth111I GACNNNGTC 1 cut(s) 239
VpaK11BI GGWCC 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.