pycom07g13880

Acetyl-coenzyme A carboxylase carboxyl transferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
15777591 .. 15777989
399 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 399 bp
ATGGTGTTGCATTTTGTTGTTATTGATGATGTGGTTGCTGTTGCAGGAGCCTCTTGGTGGTGCACAATTGAAACTTTTGAAGAATGCTCAAGAAAAGATATCGAAGGGGAAGCAACGGATAAGGTCTTAAAGTCAGCTAACTTGGAGGTTGTCGGCGTGACCAAGAAAAATATGGTGACTACTCCTCCAGAGTTGAAGGAGGAGATAGTAAACGCCGGGATTTATGAGGAAATTGAAAGAGTTGTAAATGAAGCCGGTATTAGTGGAAGAATGGAGGAGTTGAAGGCTGATATAGGAAAATGCTTATCAAGTTCAGAAAGAAAGAGAAAGGGCAGAAGCAAAGATAAAGGAGGAGATTCTTGCTGCTTTGGATGTAGAAGCACTAAAAGCAAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

14.45

Weight (kDa)

5.58

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 57
AgsI TTSAA 5 cut(s) 71, 80, 196, 236, 283
AluBI AGCT 1 cut(s) 137
AluI AGCT 1 cut(s) 137
Alw21I GWGCWC 1 cut(s) 65
Alw44I GTGCAC 1 cut(s) 61
ApaLI GTGCAC 1 cut(s) 61
ApeKI GCWGC 1 cut(s) 363
AsuC2I CCSGG 1 cut(s) 217
AsuHPI GGTGA 1 cut(s) 187
BaeGI GKGCMC 1 cut(s) 65
Bbv12I GWGCWC 1 cut(s) 65
BbvI GCAGC 1 cut(s) 350
BcnI CCSGG 1 cut(s) 217
BisI GCNGC 1 cut(s) 364
BlsI GCNGC 1 cut(s) 365
Bme1390I CCNGG 1 cut(s) 217
BmiI GGNNCC 1 cut(s) 49
BmrFI CCNGG 1 cut(s) 217
BpmI CTGGAG 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 73
BpuMI CCSGG 1 cut(s) 217
BsaXI ACNNNNNCTCC 2 cut(s) 169, 199
Bsc4I CCNNNNNNNGG 1 cut(s) 57
Bse118I RCCGGY 1 cut(s) 254
BseGI GGATG 1 cut(s) 377
BseLI CCNNNNNNNGG 1 cut(s) 57
BseRI GAGGAG 4 cut(s) 174, 215, 290, 366
BseSI GKGCMC 1 cut(s) 65
BseXI GCAGC 1 cut(s) 350
BsiHKAI GWGCWC 1 cut(s) 65
BsiSI CCGG 2 cut(s) 216, 255
BslI CCNNNNNNNGG 1 cut(s) 57
BsmI GAATGC 1 cut(s) 89
Bsp1286I GDGCHC 1 cut(s) 65
BspLI GGNNCC 1 cut(s) 49
BsrFI RCCGGY 1 cut(s) 254
BssAI RCCGGY 1 cut(s) 254
BstF5I GGATG 1 cut(s) 377
BstMWI GCNNNNNNNGC 1 cut(s) 387
BstSCI CCNGG 1 cut(s) 215
BstSLI GKGCMC 1 cut(s) 65
BstV1I GCAGC 1 cut(s) 350
BtsCI GGATG 1 cut(s) 377
Cfr10I RCCGGY 1 cut(s) 254
CviJI RGCY 4 cut(s) 50, 137, 254, 287
CviKI_1 RGCY 4 cut(s) 50, 137, 254, 287
Eco32I GATATC 1 cut(s) 100
EcoRV GATATC 1 cut(s) 100
FaiI YATR 3 cut(s) 173, 225, 293
Fnu4HI GCNGC 1 cut(s) 364
FokI GGATG 1 cut(s) 384
Fsp4HI GCNGC 1 cut(s) 364
GluI GCNGC 1 cut(s) 364
GsuI CTGGAG 1 cut(s) 171
HapII CCGG 2 cut(s) 216, 255
HinfI GANTC 1 cut(s) 356
HpaII CCGG 2 cut(s) 216, 255
HphI GGTGA 1 cut(s) 187
Hpy166II GTNNAC 2 cut(s) 63, 211
Hpy188I TCNGA 1 cut(s) 316
Hpy188III TCNNGA 2 cut(s) 90, 188
Hpy8I GTNNAC 2 cut(s) 63, 211
HpyAV CCTTC 3 cut(s) 98, 190, 277
HpyCH4V TGCA 3 cut(s) 10, 44, 63
HpyF10VI GCNNNNNNNGC 1 cut(s) 387
LmnI GCTCC 1 cut(s) 47
LpnPI CCDG 4 cut(s) 30, 201, 229, 268
Lsp1109I GCAGC 1 cut(s) 350
MaeIII GTNAC 2 cut(s) 157, 175
MboII GAAGA 2 cut(s) 92, 279
MfeI CAATTG 1 cut(s) 66
MhlI GDGCHC 1 cut(s) 65
MluCI AATT 2 cut(s) 66, 231
MnlI CCTC 7 cut(s) 61, 139, 193, 195, 220, 268, 344
MseI TTAA 1 cut(s) 128
MspI CCGG 2 cut(s) 216, 255
MspR9I CCNGG 1 cut(s) 217
MunI CAATTG 1 cut(s) 66
Mva1269I GAATGC 1 cut(s) 89
MwoI GCNNNNNNNGC 1 cut(s) 387
NciI CCSGG 1 cut(s) 217
NlaIV GGNNCC 1 cut(s) 49
NmuCI GTSAC 2 cut(s) 157, 175
PctI GAATGC 1 cut(s) 89
PfeI GAWTC 1 cut(s) 356
PkrI GCNGC 1 cut(s) 365
PspN4I GGNNCC 1 cut(s) 49
SaqAI TTAA 1 cut(s) 128
SatI GCNGC 1 cut(s) 364
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 1 cut(s) 65
SetI ASST 4 cut(s) 126, 139, 150, 397
SmlI CTYRAG 1 cut(s) 88
SmoI CTYRAG 1 cut(s) 88
Sse9I AATT 2 cut(s) 66, 231
StyD4I CCNGG 1 cut(s) 215
TaqI TCGA 1 cut(s) 102
TasI AATT 2 cut(s) 66, 231
TfiI GAWTC 1 cut(s) 356
Tru1I TTAA 1 cut(s) 128
Tru9I TTAA 1 cut(s) 128
TseFI GTSAC 2 cut(s) 157, 175
TseI GCWGC 1 cut(s) 363
Tsp45I GTSAC 2 cut(s) 157, 175
TspDTI ATGAA 1 cut(s) 264
TspGWI ACGGA 1 cut(s) 131
VneI GTGCAC 1 cut(s) 61
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.