pycom07g17560

Glutathione S-transferase, C-terminal domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
20091955 .. 20092548
594 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 315 bp
ATGTTGGATCCTCGGAAGAAAGAGTTTGGAGAAGAGTTGCTGTCCTACACAGACTCCTTCAATAGATCTGTGTTTTCGTCGGTTAAACAAGATGAAATCAAGTCAGATGGTGAGACGATCACTTATTGGACATTTGACTATATCGAAACTGCTCTTTCCAAATTTGAAGACGGACCTTTCTTTCTTTGCAAGTTTAGTCTGGTGGATATAGCTTACGCTCCCTTCCTCGAAAGTTTTCACGTACAAAACGATTGGATTCGGAATTTGATAGAAAAGGTTACTCATGTAAATTCATCACTTTTTTGTAGGAGATGA

Protein Analysis

105

Amino Acids

12.28

Weight (kDa)

4.94

Isoelectric Point (pI)

48.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 2, 15
AcsI RAATTY 3 cut(s) 161, 262, 289
AfaI GTAC 1 cut(s) 243
AgsI TTSAA 2 cut(s) 61, 167
AluBI AGCT 1 cut(s) 212
AluI AGCT 1 cut(s) 212
Alw26I GTCTC 1 cut(s) 107
AlwI GGATC 2 cut(s) 2, 15
ApoI RAATTY 3 cut(s) 161, 262, 289
Asp700I GAANNNNTTC 1 cut(s) 234
AspS9I GGNCC 1 cut(s) 173
AsuHPI GGTGA 1 cut(s) 122
AvaII GGWCC 1 cut(s) 173
BamHI GGATCC 1 cut(s) 7
BbsI GAAGAC 1 cut(s) 174
BccI CCATC 1 cut(s) 101
BcoDI GTCTC 1 cut(s) 107
BglII AGATCT 1 cut(s) 65
Bme18I GGWCC 1 cut(s) 173
BmgT120I GGNCC 1 cut(s) 173
BmiI GGNNCC 1 cut(s) 9
BpiI GAAGAC 1 cut(s) 174
BsaAI YACGTR 1 cut(s) 241
BsaJI CCNNGG 1 cut(s) 11
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
BseDI CCNNGG 1 cut(s) 11
BsmAI GTCTC 1 cut(s) 107
BsmBI CGTCTC 1 cut(s) 107
Bsp143I GATC 3 cut(s) 7, 65, 117
BspLI GGNNCC 1 cut(s) 9
BspPI GGATC 2 cut(s) 2, 15
BssECI CCNNGG 1 cut(s) 11
BssMI GATC 3 cut(s) 7, 65, 117
Bst6I CTCTTC 1 cut(s) 27
BstBAI YACGTR 1 cut(s) 241
BstKTI GATC 3 cut(s) 10, 68, 120
BstMAI GTCTC 1 cut(s) 107
BstMBI GATC 3 cut(s) 7, 65, 117
BstV2I GAAGAC 1 cut(s) 174
BstX2I RGATCY 2 cut(s) 7, 65
BstYI RGATCY 2 cut(s) 7, 65
Cfr13I GGNCC 1 cut(s) 173
Csp6I GTAC 1 cut(s) 242
CviAII CATG 1 cut(s) 284
CviJI RGCY 1 cut(s) 212
CviKI_1 RGCY 1 cut(s) 212
CviQI GTAC 1 cut(s) 242
DpnI GATC 3 cut(s) 9, 67, 119
DpnII GATC 3 cut(s) 7, 65, 117
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Eco47I GGWCC 1 cut(s) 173
Esp3I CGTCTC 1 cut(s) 107
FaeI CATG 1 cut(s) 287
FaiI YATR 3 cut(s) 141, 209, 285
FatI CATG 1 cut(s) 283
Hin1II CATG 1 cut(s) 287
HinfI GANTC 2 cut(s) 53, 256
HphI GGTGA 1 cut(s) 122
Hpy188I TCNGA 3 cut(s) 15, 106, 261
Hpy99I CGWCG 1 cut(s) 82
HpyAV CCTTC 2 cut(s) 67, 232
HpyCH4IV ACGT 1 cut(s) 240
HpyCH4V TGCA 1 cut(s) 189
HpySE526I ACGT 1 cut(s) 240
Hsp92II CATG 1 cut(s) 287
Kzo9I GATC 3 cut(s) 7, 65, 117
LmnI GCTCC 1 cut(s) 223
LpnPI CCDG 1 cut(s) 185
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 1 cut(s) 277
MalI GATC 3 cut(s) 9, 67, 119
MboI GATC 3 cut(s) 7, 65, 117
MboII GAAGA 3 cut(s) 28, 44, 179
MflI RGATCY 2 cut(s) 7, 65
MluCI AATT 3 cut(s) 161, 262, 289
MlyI GAGTC 1 cut(s) 47
MnlI CCTC 2 cut(s) 21, 236
MroXI GAANNNNTTC 1 cut(s) 234
MseI TTAA 1 cut(s) 84
NdeII GATC 3 cut(s) 7, 65, 117
NlaIII CATG 1 cut(s) 287
NlaIV GGNNCC 1 cut(s) 9
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PdmI GAANNNNTTC 1 cut(s) 234
PfeI GAWTC 1 cut(s) 256
PleI GAGTC 1 cut(s) 47
PpsI GAGTC 1 cut(s) 47
Ppu21I YACGTR 1 cut(s) 241
PspN4I GGNNCC 1 cut(s) 9
PspPI GGNCC 1 cut(s) 173
PsuI RGATCY 2 cut(s) 7, 65
RsaI GTAC 1 cut(s) 243
RsaNI GTAC 1 cut(s) 242
SaqAI TTAA 1 cut(s) 84
Sau3AI GATC 3 cut(s) 7, 65, 117
Sau96I GGNCC 1 cut(s) 173
SchI GAGTC 1 cut(s) 47
SetI ASST 4 cut(s) 178, 214, 243, 279
SgeI CNNG 8 cut(s) 24, 101, 112, 202, 212, 239, 251, 296
SinI GGWCC 1 cut(s) 173
Sse9I AATT 3 cut(s) 161, 262, 289
TaiI ACGT 1 cut(s) 243
TaqI TCGA 2 cut(s) 144, 228
TasI AATT 3 cut(s) 161, 262, 289
TfiI GAWTC 1 cut(s) 256
Tru1I TTAA 1 cut(s) 84
Tru9I TTAA 1 cut(s) 84
TspDTI ATGAA 2 cut(s) 108, 282
TspGWI ACGGA 1 cut(s) 186
VpaK11BI GGWCC 1 cut(s) 173
XapI RAATTY 3 cut(s) 161, 262, 289
XmnI GAANNNNTTC 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.