pycom07g20060

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
22242289 .. 22242522
234 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 234 bp
ATGAAAGGGGAGTTGGTGAGGCTTTTGGACAAGAGGGTTGGGCCGCCGGAAGTGAATGAATCGGAAGCGGTTGAGCTGGTGGCATATACAGCAATGCATTGTGTGAGTTTGGAAGGGAAAGATAGGCCGACGATGGCGGACATTGTGGCGAACTTGGAGAGGGCGTATGCTCTCTGCGATGAAAGCCCTGGCAGCATCTCAAGTGGTGCAATCTCCATTGTCTCAGCAGAGTAG

Protein Analysis

78

Amino Acids

8.19

Weight (kDa)

4.62

Isoelectric Point (pI)

38.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028748)

Species Orthologous Gene IDs
malus_domestica MD00G1166600.v1.1
pyrus_communis pycom07g20060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 44, 68, 137
AjnI CCWGG 1 cut(s) 187
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AluBI AGCT 1 cut(s) 76
AluI AGCT 1 cut(s) 76
Alw26I GTCTC 1 cut(s) 226
AoxI GGCC 2 cut(s) 41, 125
ApeKI GCWGC 1 cut(s) 192
AspS9I GGNCC 1 cut(s) 41
AsuHPI GGTGA 1 cut(s) 28
BbvI GCAGC 1 cut(s) 204
BccI CCATC 1 cut(s) 127
BciT130I CCWGG 1 cut(s) 189
BcoDI GTCTC 1 cut(s) 226
BisI GCNGC 2 cut(s) 44, 193
BlsI GCNGC 2 cut(s) 45, 194
Bme1390I CCNGG 1 cut(s) 189
BmgT120I GGNCC 1 cut(s) 41
BmrFI CCNGG 1 cut(s) 189
BmsI GCATC 1 cut(s) 204
BpuEI CTTGAG 1 cut(s) 184
BsaJI CCNNGG 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bse3DI GCAATG 1 cut(s) 99
BseBI CCWGG 1 cut(s) 189
BseDI CCNNGG 1 cut(s) 187
BseMI GCAATG 1 cut(s) 99
BseXI GCAGC 1 cut(s) 204
BshFI GGCC 2 cut(s) 43, 127
BsiSI CCGG 1 cut(s) 47
BsmAI GTCTC 1 cut(s) 226
BsnI GGCC 2 cut(s) 43, 127
BspACI CCGC 3 cut(s) 44, 68, 137
BspANI GGCC 2 cut(s) 43, 127
BsrDI GCAATG 1 cut(s) 99
BssECI CCNNGG 1 cut(s) 187
Bst2UI CCWGG 1 cut(s) 189
BstDEI CTNAG 1 cut(s) 223
BstMAI GTCTC 1 cut(s) 226
BstMWI GCNNNNNNNGC 3 cut(s) 89, 183, 192
BstNI CCWGG 1 cut(s) 189
BstSCI CCNGG 1 cut(s) 187
BstV1I GCAGC 1 cut(s) 204
BsuRI GGCC 2 cut(s) 43, 127
BtgZI GCGATG 1 cut(s) 192
Cfr13I GGNCC 1 cut(s) 41
CviJI RGCY 5 cut(s) 22, 43, 76, 127, 186
CviKI_1 RGCY 5 cut(s) 22, 43, 76, 127, 186
DdeI CTNAG 1 cut(s) 223
EciI GGCGGA 1 cut(s) 152
EcoRII CCWGG 1 cut(s) 187
EcoT22I ATGCAT 1 cut(s) 99
FaiI YATR 3 cut(s) 85, 87, 168
Fnu4HI GCNGC 2 cut(s) 44, 193
Fsp4HI GCNGC 2 cut(s) 44, 193
GluI GCNGC 2 cut(s) 44, 193
HaeIII GGCC 2 cut(s) 43, 127
HapII CCGG 1 cut(s) 47
HinfI GANTC 1 cut(s) 59
HpaII CCGG 1 cut(s) 47
HphI GGTGA 1 cut(s) 28
Hpy188I TCNGA 1 cut(s) 64
Hpy99I CGWCG 1 cut(s) 133
HpyAV CCTTC 1 cut(s) 107
HpyCH4V TGCA 2 cut(s) 97, 209
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 183, 192
HpyF3I CTNAG 1 cut(s) 223
LpnPI CCDG 4 cut(s) 60, 62, 174, 201
Lsp1109I GCAGC 1 cut(s) 204
LweI GCATC 1 cut(s) 204
MnlI CCTC 3 cut(s) 12, 27, 153
Mph1103I ATGCAT 1 cut(s) 99
MspI CCGG 1 cut(s) 47
MspR9I CCNGG 1 cut(s) 189
MvaI CCWGG 1 cut(s) 189
MwoI GCNNNNNNNGC 3 cut(s) 89, 183, 192
NsiI ATGCAT 1 cut(s) 99
PfeI GAWTC 1 cut(s) 59
PkrI GCNGC 2 cut(s) 45, 194
Psp6I CCWGG 1 cut(s) 187
PspGI CCWGG 1 cut(s) 187
PspPI GGNCC 1 cut(s) 41
SatI GCNGC 2 cut(s) 44, 193
Sau96I GGNCC 1 cut(s) 41
ScrFI CCNGG 1 cut(s) 189
SetI ASST 1 cut(s) 78
SfaNI GCATC 1 cut(s) 204
SgeI CNNG 7 cut(s) 43, 59, 89, 166, 200, 201, 213
SmlI CTYRAG 1 cut(s) 199
SmoI CTYRAG 1 cut(s) 199
SsiI CCGC 3 cut(s) 44, 68, 137
StyD4I CCNGG 1 cut(s) 187
TauI GCSGC 1 cut(s) 46
TfiI GAWTC 1 cut(s) 59
TseI GCWGC 1 cut(s) 192
TspDTI ATGAA 3 cut(s) 17, 72, 195
Zsp2I ATGCAT 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.