pycom07g21050

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
22937271 .. 22937645
375 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 375 bp
ATGGAGGAGACTCTACCAGCAAGTGTATCTGTTGGTTTCCCAACTGTAGAAAGCATAACAGACGTTATTGAGATGGAACTGGTTGAAAGAAGAGTGAGGTTTGCCATCGACGAGGAGTCTCAGCCTGACACCCAGCCTGAGAATACAACGCTGATACGCGAAGAGCTTGGGGATCTCTATGCAGCTCAAGAGGCTGGGACTGCATTTATACTTGGGCACTCACACGTTAAAGCGAAGCAAGGCTCGTCGTTTATGAAGAGATTCGCCATTAACTTCGGCTATAACTGCCTGAGGAGGAATTGCCGGGGGCCAGACGTGGCGCTGAAGGTCCCGCCAGTGTCTCTTCTCGAGGTTGGCATGGTTTATATTGTGTAG

Protein Analysis

125

Amino Acids

13.77

Weight (kDa)

4.89

Isoelectric Point (pI)

52.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans_C PF22776 59 - 122 2.5e-08 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 159
AciI CCGC 1 cut(s) 332
AclWI GGATC 1 cut(s) 180
AcuI CTGAAG 1 cut(s) 344
AflIII ACRYGT 1 cut(s) 223
AgsI TTSAA 1 cut(s) 86
AhdI GACNNNNNGTC 1 cut(s) 115
AjiI CACGTC 1 cut(s) 316
AluBI AGCT 2 cut(s) 166, 185
AluI AGCT 2 cut(s) 166, 185
Alw26I GTCTC 3 cut(s) 2, 123, 345
AlwI GGATC 1 cut(s) 180
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 1 cut(s) 308
ApeKI GCWGC 1 cut(s) 182
Asp700I GAANNNNTTC 1 cut(s) 260
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 2 cut(s) 308, 328
AsuC2I CCSGG 1 cut(s) 305
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 1 cut(s) 328
AxyI CCTNAGG 1 cut(s) 290
BaeGI GKGCMC 1 cut(s) 219
BbvI GCAGC 1 cut(s) 194
BccI CCATC 2 cut(s) 67, 113
BcnI CCSGG 1 cut(s) 305
BcoDI GTCTC 3 cut(s) 2, 123, 345
BfmI CTRYAG 1 cut(s) 45
BfoI RGCGCY 1 cut(s) 323
BisI GCNGC 1 cut(s) 183
BlsI GCNGC 1 cut(s) 184
Bme1390I CCNGG 1 cut(s) 305
Bme18I GGWCC 1 cut(s) 328
BmeRI GACNNNNNGTC 1 cut(s) 115
BmeT110I CYCGRG 1 cut(s) 347
BmgBI CACGTC 1 cut(s) 316
BmgT120I GGNCC 2 cut(s) 308, 328
BmiI GGNNCC 2 cut(s) 309, 330
BmrFI CCNGG 1 cut(s) 305
BpuEI CTTGAG 1 cut(s) 171
BpuMI CCSGG 1 cut(s) 305
BsaJI CCNNGG 1 cut(s) 304
Bse1I ACTGG 2 cut(s) 84, 335
Bse21I CCTNAGG 1 cut(s) 290
BseDI CCNNGG 1 cut(s) 304
BseMII CTCAG 3 cut(s) 129, 134, 281
BseNI ACTGG 2 cut(s) 84, 335
BseRI GAGGAG 3 cut(s) 20, 128, 307
BseSI GKGCMC 1 cut(s) 219
BseXI GCAGC 1 cut(s) 194
BseYI CCCAGC 2 cut(s) 132, 194
Bsh1236I CGCG 1 cut(s) 159
BshFI GGCC 1 cut(s) 310
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 1 cut(s) 304
BslFI GGGAC 2 cut(s) 211, 314
BsmAI GTCTC 3 cut(s) 2, 123, 345
BsmFI GGGAC 2 cut(s) 211, 314
BsnI GGCC 1 cut(s) 310
BsoBI CYCGRG 1 cut(s) 347
Bsp1286I GDGCHC 1 cut(s) 219
Bsp143I GATC 1 cut(s) 172
BspACI CCGC 1 cut(s) 332
BspANI GGCC 1 cut(s) 310
BspCNI CTCAG 3 cut(s) 130, 133, 282
BspFNI CGCG 1 cut(s) 159
BspLI GGNNCC 2 cut(s) 309, 330
BspPI GGATC 1 cut(s) 180
BspQI GCTCTTC 1 cut(s) 156
BsrI ACTGG 2 cut(s) 84, 335
BssECI CCNNGG 1 cut(s) 304
BssMI GATC 1 cut(s) 172
Bst4CI ACNGT 1 cut(s) 46
Bst6I CTCTTC 4 cut(s) 85, 156, 251, 348
BstDEI CTNAG 3 cut(s) 120, 138, 290
BstFNI CGCG 1 cut(s) 159
BstH2I RGCGCY 1 cut(s) 323
BstHHI GCGC 1 cut(s) 322
BstKTI GATC 1 cut(s) 175
BstMAI GTCTC 3 cut(s) 2, 123, 345
BstMBI GATC 1 cut(s) 172
BstMWI GCNNNNNNNGC 3 cut(s) 191, 200, 285
BstSCI CCNGG 1 cut(s) 303
BstSFI CTRYAG 1 cut(s) 45
BstSLI GKGCMC 1 cut(s) 219
BstUI CGCG 1 cut(s) 159
BstV1I GCAGC 1 cut(s) 194
BstX2I RGATCY 1 cut(s) 172
BstYI RGATCY 1 cut(s) 172
Bsu36I CCTNAGG 1 cut(s) 290
BsuRI GGCC 1 cut(s) 310
BtrI CACGTC 1 cut(s) 316
BtsIMutI CAGTG 1 cut(s) 342
CfoI GCGC 1 cut(s) 322
Cfr13I GGNCC 2 cut(s) 308, 328
CviAII CATG 1 cut(s) 358
CviJI RGCY 8 cut(s) 124, 136, 166, 185, 194, 243, 279, 310
CviKI_1 RGCY 8 cut(s) 124, 136, 166, 185, 194, 243, 279, 310
DdeI CTNAG 3 cut(s) 120, 138, 290
DpnI GATC 1 cut(s) 174
DpnII GATC 1 cut(s) 172
DriI GACNNNNNGTC 1 cut(s) 115
Eam1104I CTCTTC 4 cut(s) 85, 156, 251, 348
Eam1105I GACNNNNNGTC 1 cut(s) 115
EarI CTCTTC 4 cut(s) 85, 156, 251, 348
Eco47I GGWCC 1 cut(s) 328
Eco57I CTGAAG 1 cut(s) 344
Eco81I CCTNAGG 1 cut(s) 290
Eco88I CYCGRG 1 cut(s) 347
EcoO109I RGGNCCY 1 cut(s) 328
FaeI CATG 1 cut(s) 361
FaiI YATR 7 cut(s) 56, 180, 209, 254, 282, 359, 366
FaqI GGGAC 2 cut(s) 211, 314
FatI CATG 1 cut(s) 357
FauI CCCGC 1 cut(s) 339
Fnu4HI GCNGC 1 cut(s) 183
Fsp4HI GCNGC 1 cut(s) 183
GlaI GCGC 1 cut(s) 321
GluI GCNGC 1 cut(s) 183
GsaI CCCAGC 2 cut(s) 136, 198
HaeII RGCGCY 1 cut(s) 323
HaeIII GGCC 1 cut(s) 310
HapII CCGG 1 cut(s) 304
HhaI GCGC 1 cut(s) 322
Hin1II CATG 1 cut(s) 361
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HinfI GANTC 3 cut(s) 10, 116, 261
HpaII CCGG 1 cut(s) 304
Hpy188III TCNNGA 2 cut(s) 188, 347
Hpy99I CGWCG 2 cut(s) 113, 250
HpyAV CCTTC 1 cut(s) 319
HpyCH4III ACNGT 1 cut(s) 46
HpyCH4IV ACGT 3 cut(s) 63, 225, 315
HpyCH4V TGCA 2 cut(s) 182, 203
HpyF10VI GCNNNNNNNGC 3 cut(s) 191, 200, 285
HpyF3I CTNAG 3 cut(s) 120, 138, 290
HpySE526I ACGT 3 cut(s) 63, 225, 315
Hsp92II CATG 1 cut(s) 361
HspAI GCGC 1 cut(s) 320
Kzo9I GATC 1 cut(s) 172
LguI GCTCTTC 1 cut(s) 156
Lsp1109I GCAGC 1 cut(s) 194
MaeII ACGT 3 cut(s) 63, 225, 315
MalI GATC 1 cut(s) 174
MboI GATC 1 cut(s) 172
MboII GAAGA 4 cut(s) 102, 173, 268, 335
MflI RGATCY 1 cut(s) 172
MhlI GDGCHC 1 cut(s) 219
MluCI AATT 1 cut(s) 298
MlyI GAGTC 2 cut(s) 4, 125
MnlI CCTC 6 cut(s) 90, 106, 184, 285, 288, 343
MroXI GAANNNNTTC 1 cut(s) 260
MseI TTAA 2 cut(s) 228, 270
MspI CCGG 1 cut(s) 304
MspR9I CCNGG 1 cut(s) 305
MvnI CGCG 1 cut(s) 159
MwoI GCNNNNNNNGC 3 cut(s) 191, 200, 285
NciI CCSGG 1 cut(s) 305
NdeII GATC 1 cut(s) 172
NlaIII CATG 1 cut(s) 361
NlaIV GGNNCC 2 cut(s) 309, 330
PaeR7I CTCGAG 1 cut(s) 347
PciSI GCTCTTC 1 cut(s) 156
PdmI GAANNNNTTC 1 cut(s) 260
PfeI GAWTC 1 cut(s) 261
PkrI GCNGC 1 cut(s) 184
PleI GAGTC 2 cut(s) 4, 124
PpsI GAGTC 2 cut(s) 4, 124
PpuMI RGGWCCY 1 cut(s) 328
Psp5II RGGWCCY 1 cut(s) 328
PspFI CCCAGC 2 cut(s) 132, 194
PspN4I GGNNCC 2 cut(s) 309, 330
PspPI GGNCC 2 cut(s) 308, 328
PspPPI RGGWCCY 1 cut(s) 328
PsuI RGATCY 1 cut(s) 172
SapI GCTCTTC 1 cut(s) 156
SaqAI TTAA 2 cut(s) 228, 270
SatI GCNGC 1 cut(s) 183
Sau3AI GATC 1 cut(s) 172
Sau96I GGNCC 2 cut(s) 308, 328
SchI GAGTC 2 cut(s) 4, 125
ScrFI CCNGG 1 cut(s) 305
SduI GDGCHC 1 cut(s) 219
SetI ASST 8 cut(s) 66, 101, 168, 187, 228, 318, 330, 354
SfcI CTRYAG 1 cut(s) 45
Sfr274I CTCGAG 1 cut(s) 347
SinI GGWCC 1 cut(s) 328
SlaI CTCGAG 1 cut(s) 347
SmlI CTYRAG 2 cut(s) 186, 347
SmoI CTYRAG 2 cut(s) 186, 347
Sse9I AATT 1 cut(s) 298
SsiI CCGC 1 cut(s) 332
StyD4I CCNGG 1 cut(s) 303
TaaI ACNGT 1 cut(s) 46
TaiI ACGT 3 cut(s) 66, 228, 318
TaqI TCGA 2 cut(s) 108, 348
TasI AATT 1 cut(s) 298
TfiI GAWTC 1 cut(s) 261
Tru1I TTAA 2 cut(s) 228, 270
Tru9I TTAA 2 cut(s) 228, 270
TscAI CASTG 1 cut(s) 342
TseI GCWGC 1 cut(s) 182
TspDTI ATGAA 1 cut(s) 269
TspRI CASTG 1 cut(s) 342
VpaK11BI GGWCC 1 cut(s) 328
XhoI CTCGAG 1 cut(s) 347
XmnI GAANNNNTTC 1 cut(s) 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.