Cleavage and polyadenylation specificity factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 74, 87, 93 |
| AclWI | GGATC | 2 cut(s) | 110, 275 |
| AcsI | RAATTY | 2 cut(s) | 18, 147 |
| AfaI | GTAC | 1 cut(s) | 190 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| AgsI | TTSAA | 3 cut(s) | 17, 137, 174 |
| AluBI | AGCT | 1 cut(s) | 195 |
| AluI | AGCT | 1 cut(s) | 195 |
| AlwI | GGATC | 2 cut(s) | 110, 275 |
| AoxI | GGCC | 2 cut(s) | 214, 262 |
| ApaI | GGGCCC | 1 cut(s) | 218 |
| ApoI | RAATTY | 2 cut(s) | 18, 147 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 225 |
| AspS9I | GGNCC | 3 cut(s) | 214, 215, 263 |
| BaeGI | GKGCMC | 1 cut(s) | 218 |
| BanII | GRGCYC | 1 cut(s) | 218 |
| BccI | CCATC | 3 cut(s) | 64, 92, 316 |
| BfaI | CTAG | 2 cut(s) | 105, 192 |
| BisI | GCNGC | 2 cut(s) | 75, 94 |
| BlsI | GCNGC | 2 cut(s) | 76, 95 |
| BmgT120I | GGNCC | 3 cut(s) | 214, 215, 263 |
| BmiI | GGNNCC | 2 cut(s) | 216, 333 |
| BmsI | GCATC | 1 cut(s) | 130 |
| BpuEI | CTTGAG | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 1 cut(s) | 286 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| BseDI | CCNNGG | 1 cut(s) | 286 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| BseSI | GKGCMC | 1 cut(s) | 218 |
| BshFI | GGCC | 2 cut(s) | 216, 264 |
| BslFI | GGGAC | 1 cut(s) | 328 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| BsmFI | GGGAC | 1 cut(s) | 328 |
| BsmI | GAATGC | 1 cut(s) | 54 |
| BsnI | GGCC | 2 cut(s) | 216, 264 |
| Bsp120I | GGGCCC | 1 cut(s) | 214 |
| Bsp1286I | GDGCHC | 1 cut(s) | 218 |
| Bsp143I | GATC | 2 cut(s) | 115, 280 |
| BspACI | CCGC | 3 cut(s) | 74, 87, 93 |
| BspANI | GGCC | 2 cut(s) | 216, 264 |
| BspLI | GGNNCC | 2 cut(s) | 216, 333 |
| BspPI | GGATC | 2 cut(s) | 110, 275 |
| BssECI | CCNNGG | 1 cut(s) | 286 |
| BssMI | GATC | 2 cut(s) | 115, 280 |
| BssT1I | CCWWGG | 1 cut(s) | 286 |
| Bst4CI | ACNGT | 2 cut(s) | 56, 206 |
| Bst6I | CTCTTC | 1 cut(s) | 106 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 349 |
| BstC8I | GCNNGC | 1 cut(s) | 32 |
| BstDEI | CTNAG | 1 cut(s) | 127 |
| BstKTI | GATC | 2 cut(s) | 118, 283 |
| BstMBI | GATC | 2 cut(s) | 115, 280 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 93, 349 |
| BstNSI | RCATGY | 1 cut(s) | 34 |
| BstSLI | GKGCMC | 1 cut(s) | 218 |
| BstX2I | RGATCY | 1 cut(s) | 115 |
| BstYI | RGATCY | 1 cut(s) | 115 |
| BsuRI | GGCC | 2 cut(s) | 216, 264 |
| BtgZI | GCGATG | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 1 cut(s) | 202 |
| Cac8I | GCNNGC | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 3 cut(s) | 214, 215, 263 |
| Csp6I | GTAC | 1 cut(s) | 189 |
| CviAII | CATG | 3 cut(s) | 31, 179, 355 |
| CviJI | RGCY | 6 cut(s) | 131, 195, 216, 226, 264, 299 |
| CviKI_1 | RGCY | 6 cut(s) | 131, 195, 216, 226, 264, 299 |
| CviQI | GTAC | 1 cut(s) | 189 |
| DdeI | CTNAG | 1 cut(s) | 127 |
| DpnI | GATC | 2 cut(s) | 117, 282 |
| DpnII | GATC | 2 cut(s) | 115, 280 |
| Eam1104I | CTCTTC | 1 cut(s) | 106 |
| EarI | CTCTTC | 1 cut(s) | 106 |
| EciI | GGCGGA | 1 cut(s) | 102 |
| Eco130I | CCWWGG | 1 cut(s) | 286 |
| Eco24I | GRGCYC | 1 cut(s) | 218 |
| EcoO109I | RGGNCCY | 1 cut(s) | 214 |
| EcoT14I | CCWWGG | 1 cut(s) | 286 |
| EcoT38I | GRGCYC | 1 cut(s) | 218 |
| ErhI | CCWWGG | 1 cut(s) | 286 |
| FaeI | CATG | 3 cut(s) | 34, 182, 358 |
| FaiI | YATR | 4 cut(s) | 32, 180, 200, 356 |
| FaqI | GGGAC | 1 cut(s) | 328 |
| FatI | CATG | 3 cut(s) | 30, 178, 354 |
| Fnu4HI | GCNGC | 2 cut(s) | 75, 94 |
| FriOI | GRGCYC | 1 cut(s) | 218 |
| Fsp4HI | GCNGC | 2 cut(s) | 75, 94 |
| FspBI | CTAG | 2 cut(s) | 105, 192 |
| GluI | GCNGC | 2 cut(s) | 75, 94 |
| HaeIII | GGCC | 2 cut(s) | 216, 264 |
| Hin1II | CATG | 3 cut(s) | 34, 182, 358 |
| HinfI | GANTC | 4 cut(s) | 170, 183, 248, 361 |
| Hpy188I | TCNGA | 1 cut(s) | 336 |
| Hpy188III | TCNNGA | 2 cut(s) | 105, 158 |
| HpyAV | CCTTC | 1 cut(s) | 331 |
| HpyCH4III | ACNGT | 2 cut(s) | 56, 206 |
| HpyCH4V | TGCA | 8 cut(s) | 30, 34, 45, 52, 143, 202, 257, 343 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 93, 349 |
| HpyF3I | CTNAG | 1 cut(s) | 127 |
| Hsp92II | CATG | 3 cut(s) | 34, 182, 358 |
| Kzo9I | GATC | 2 cut(s) | 115, 280 |
| LpnPI | CCDG | 5 cut(s) | 69, 231, 277, 287, 367 |
| LweI | GCATC | 1 cut(s) | 130 |
| MaeI | CTAG | 2 cut(s) | 105, 192 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MalI | GATC | 2 cut(s) | 117, 282 |
| MboI | GATC | 2 cut(s) | 115, 280 |
| MboII | GAAGA | 3 cut(s) | 120, 123, 149 |
| MflI | RGATCY | 1 cut(s) | 115 |
| MhlI | GDGCHC | 1 cut(s) | 218 |
| MluCI | AATT | 4 cut(s) | 18, 147, 174, 344 |
| MlyI | GAGTC | 3 cut(s) | 177, 257, 370 |
| MmeI | TCCRAC | 1 cut(s) | 18 |
| MnlI | CCTC | 3 cut(s) | 83, 205, 254 |
| MroXI | GAANNNNTTC | 1 cut(s) | 225 |
| MseI | TTAA | 2 cut(s) | 273, 377 |
| MslI | CAYNNNNRTG | 1 cut(s) | 57 |
| Mva1269I | GAATGC | 1 cut(s) | 54 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 93, 349 |
| NdeII | GATC | 2 cut(s) | 115, 280 |
| NlaIII | CATG | 3 cut(s) | 34, 182, 358 |
| NlaIV | GGNNCC | 2 cut(s) | 216, 333 |
| NspI | RCATGY | 1 cut(s) | 34 |
| PaeI | GCATGC | 1 cut(s) | 34 |
| PctI | GAATGC | 1 cut(s) | 54 |
| PdmI | GAANNNNTTC | 1 cut(s) | 225 |
| PfeI | GAWTC | 1 cut(s) | 170 |
| PkrI | GCNGC | 2 cut(s) | 76, 95 |
| PleI | GAGTC | 3 cut(s) | 177, 256, 369 |
| PpsI | GAGTC | 3 cut(s) | 177, 256, 369 |
| PspN4I | GGNNCC | 2 cut(s) | 216, 333 |
| PspOMI | GGGCCC | 1 cut(s) | 214 |
| PspPI | GGNCC | 3 cut(s) | 214, 215, 263 |
| PsuI | RGATCY | 1 cut(s) | 115 |
| RsaI | GTAC | 1 cut(s) | 190 |
| RsaNI | GTAC | 1 cut(s) | 189 |
| RseI | CAYNNNNRTG | 1 cut(s) | 57 |
| SaqAI | TTAA | 2 cut(s) | 273, 377 |
| SatI | GCNGC | 2 cut(s) | 75, 94 |
| Sau3AI | GATC | 2 cut(s) | 115, 280 |
| Sau96I | GGNCC | 3 cut(s) | 214, 215, 263 |
| SchI | GAGTC | 3 cut(s) | 177, 257, 370 |
| SduI | GDGCHC | 1 cut(s) | 218 |
| SetI | ASST | 3 cut(s) | 197, 279, 342 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 57 |
| SmlI | CTYRAG | 1 cut(s) | 158 |
| SmoI | CTYRAG | 1 cut(s) | 158 |
| SphI | GCATGC | 1 cut(s) | 34 |
| Sse9I | AATT | 4 cut(s) | 18, 147, 174, 344 |
| SsiI | CCGC | 3 cut(s) | 74, 87, 93 |
| SspMI | CTAG | 2 cut(s) | 105, 192 |
| StyI | CCWWGG | 1 cut(s) | 286 |
| TaaI | ACNGT | 2 cut(s) | 56, 206 |
| TasI | AATT | 4 cut(s) | 18, 147, 174, 344 |
| TauI | GCSGC | 2 cut(s) | 77, 96 |
| TfiI | GAWTC | 1 cut(s) | 170 |
| Tru1I | TTAA | 2 cut(s) | 273, 377 |
| Tru9I | TTAA | 2 cut(s) | 273, 377 |
| TscAI | CASTG | 1 cut(s) | 209 |
| TspDTI | ATGAA | 2 cut(s) | 167, 218 |
| TspGWI | ACGGA | 1 cut(s) | 176 |
| TspRI | CASTG | 1 cut(s) | 209 |
| XapI | RAATTY | 2 cut(s) | 18, 147 |
| XbaI | TCTAGA | 1 cut(s) | 104 |
| XceI | RCATGY | 1 cut(s) | 34 |
| XmnI | GAANNNNTTC | 1 cut(s) | 225 |
| XspI | CTAG | 2 cut(s) | 105, 192 |