pycom07g28120

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Reverse (-)
27578955 .. 27579140
186 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGGCGTCCAGATCGTTTAAGCCGAGCCGCTCGGATATGTCATCAAACTCTGATATGCCTGATTCCAACAACAAGACTCCAATCCCTCCAACTGTGACATTTGGCCGCAGAACTTCCTCGGGTCGCTACGTCAGCTACTCCAGGGATGATCGATCACCAGTGAACTTGGGAGCGGTGACTATATGA

Protein Analysis

62

Amino Acids

6.68

Weight (kDa)

10.39

Isoelectric Point (pI)

86.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 30, 173
AciI CCGC 3 cut(s) 28, 106, 173
AcoI YGGCCR 1 cut(s) 103
AcyI GRCGYC 1 cut(s) 5
AjnI CCWGG 1 cut(s) 140
AluBI AGCT 1 cut(s) 135
AluI AGCT 1 cut(s) 135
Ama87I CYCGRG 1 cut(s) 118
AoxI GGCC 1 cut(s) 103
AsuHPI GGTGA 1 cut(s) 147
AvaI CYCGRG 1 cut(s) 118
BciT130I CCWGG 1 cut(s) 142
BisI GCNGC 2 cut(s) 28, 106
BlsI GCNGC 2 cut(s) 29, 107
Bme1390I CCNGG 1 cut(s) 142
BmeT110I CYCGRG 1 cut(s) 118
BmrFI CCNGG 1 cut(s) 142
BpmI CTGGAG 1 cut(s) 124
Bsa29I ATCGAT 1 cut(s) 151
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 117, 141
Bse1I ACTGG 1 cut(s) 158
BseBI CCWGG 1 cut(s) 142
BseCI ATCGAT 1 cut(s) 151
BseDI CCNNGG 2 cut(s) 117, 141
BseGI GGATG 1 cut(s) 151
BseNI ACTGG 1 cut(s) 158
BshFI GGCC 1 cut(s) 105
BshVI ATCGAT 1 cut(s) 151
BsiHKCI CYCGRG 1 cut(s) 118
BsnI GGCC 1 cut(s) 105
BsoBI CYCGRG 1 cut(s) 118
Bsp143I GATC 3 cut(s) 11, 148, 152
BspACI CCGC 3 cut(s) 28, 106, 173
BspANI GGCC 1 cut(s) 105
BspDI ATCGAT 1 cut(s) 151
BsrBI CCGCTC 2 cut(s) 30, 173
BsrI ACTGG 1 cut(s) 158
BssECI CCNNGG 2 cut(s) 117, 141
BssMI GATC 3 cut(s) 11, 148, 152
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 1 cut(s) 142
Bst4CI ACNGT 1 cut(s) 94
BstACI GRCGYC 1 cut(s) 5
BstF5I GGATG 1 cut(s) 151
BstKTI GATC 3 cut(s) 14, 151, 155
BstMBI GATC 3 cut(s) 11, 148, 152
BstMWI GCNNNNNNNGC 1 cut(s) 132
BstNI CCWGG 1 cut(s) 142
BstSCI CCNGG 1 cut(s) 140
Bsu15I ATCGAT 1 cut(s) 151
BsuRI GGCC 1 cut(s) 105
BsuTUI ATCGAT 1 cut(s) 151
BtsCI GGATG 1 cut(s) 151
BtsIMutI CAGTG 1 cut(s) 165
ClaI ATCGAT 1 cut(s) 151
CviJI RGCY 4 cut(s) 22, 27, 105, 135
CviKI_1 RGCY 4 cut(s) 22, 27, 105, 135
DpnI GATC 3 cut(s) 13, 150, 154
DpnII GATC 3 cut(s) 11, 148, 152
EaeI YGGCCR 1 cut(s) 103
Eco88I CYCGRG 1 cut(s) 118
EcoRII CCWGG 1 cut(s) 140
FaiI YATR 4 cut(s) 38, 56, 182, 184
Fnu4HI GCNGC 2 cut(s) 28, 106
FokI GGATG 1 cut(s) 158
Fsp4HI GCNGC 2 cut(s) 28, 106
GluI GCNGC 2 cut(s) 28, 106
GsuI CTGGAG 1 cut(s) 124
HaeIII GGCC 1 cut(s) 105
Hin1I GRCGYC 1 cut(s) 5
HinfI GANTC 2 cut(s) 62, 76
HphI GGTGA 1 cut(s) 147
Hpy166II GTNNAC 1 cut(s) 163
Hpy188I TCNGA 2 cut(s) 34, 52
Hpy188III TCNNGA 1 cut(s) 9
Hpy8I GTNNAC 1 cut(s) 163
HpyCH4III ACNGT 1 cut(s) 94
HpyCH4IV ACGT 1 cut(s) 129
HpyF10VI GCNNNNNNNGC 1 cut(s) 132
HpySE526I ACGT 1 cut(s) 129
Hsp92I GRCGYC 1 cut(s) 5
Kzo9I GATC 3 cut(s) 11, 148, 152
LmnI GCTCC 1 cut(s) 170
LpnPI CCDG 5 cut(s) 22, 72, 127, 154, 171
MaeII ACGT 1 cut(s) 129
MaeIII GTNAC 2 cut(s) 94, 175
MalI GATC 3 cut(s) 13, 150, 154
MbiI CCGCTC 2 cut(s) 30, 173
MboI GATC 3 cut(s) 11, 148, 152
MlyI GAGTC 1 cut(s) 70
MmeI TCCRAC 2 cut(s) 90, 113
MnlI CCTC 2 cut(s) 96, 127
MseI TTAA 1 cut(s) 18
MspR9I CCNGG 1 cut(s) 142
MvaI CCWGG 1 cut(s) 142
MwoI GCNNNNNNNGC 1 cut(s) 132
NdeII GATC 3 cut(s) 11, 148, 152
NmeAIII GCCGAG 1 cut(s) 48
NmuCI GTSAC 2 cut(s) 94, 175
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PfeI GAWTC 1 cut(s) 62
PkrI GCNGC 2 cut(s) 29, 107
PleI GAGTC 1 cut(s) 70
PpsI GAGTC 1 cut(s) 70
Psp6I CCWGG 1 cut(s) 140
PspGI CCWGG 1 cut(s) 140
SaqAI TTAA 1 cut(s) 18
SatI GCNGC 2 cut(s) 28, 106
Sau3AI GATC 3 cut(s) 11, 148, 152
SchI GAGTC 1 cut(s) 70
ScrFI CCNGG 1 cut(s) 142
SetI ASST 2 cut(s) 132, 137
SsiI CCGC 3 cut(s) 28, 106, 173
StyD4I CCNGG 1 cut(s) 140
TaaI ACNGT 1 cut(s) 94
TaiI ACGT 1 cut(s) 132
TaqI TCGA 1 cut(s) 151
TauI GCSGC 2 cut(s) 30, 108
TfiI GAWTC 1 cut(s) 62
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
TscAI CASTG 1 cut(s) 165
TseFI GTSAC 2 cut(s) 94, 175
Tsp45I GTSAC 2 cut(s) 94, 175
TspRI CASTG 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.