pycom07g28170

Histone acetyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
N/A
Physical Location & Seq
Forward (+)
27600578 .. 27600817
240 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 240 bp
ATGTGGCATAAATGGAAGGAGAAGTTGGGCAGATTCTCCAAGTATATCAAGTCTTTGCTGGGGATTGACAACACAATCCCAATGGTGAACCCAAAACTTCCCTGTCGTCCAGCCATATCCTATAGGCCTATACAACCGTCTGACCTTGAGATCTTAGAGAAAATCCATGCCGATTTGTTTCCCGTTAGGTACATAATCTCATCTGCAACTTTCGCATGGGCATGTTCTTTGCTACCGTGA

Protein Analysis

80

Amino Acids

9.15

Weight (kDa)

9.51

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 191
AjuI GAANNNNNNNTTGG 2 cut(s) 8, 40
AoxI GGCC 1 cut(s) 125
AsuHPI GGTGA 1 cut(s) 97
BfmI CTRYAG 1 cut(s) 121
BglII AGATCT 1 cut(s) 150
BpuEI CTTGAG 1 cut(s) 167
BseYI CCCAGC 1 cut(s) 58
BshFI GGCC 1 cut(s) 127
BsnI GGCC 1 cut(s) 127
Bsp143I GATC 1 cut(s) 150
BspANI GGCC 1 cut(s) 127
BssMI GATC 1 cut(s) 150
Bst4CI ACNGT 2 cut(s) 138, 237
BstDEI CTNAG 1 cut(s) 154
BstKTI GATC 1 cut(s) 153
BstMBI GATC 1 cut(s) 150
BstMWI GCNNNNNNNGC 1 cut(s) 212
BstNSI RCATGY 1 cut(s) 225
BstSFI CTRYAG 1 cut(s) 121
BstX2I RGATCY 1 cut(s) 150
BstYI RGATCY 1 cut(s) 150
BsuRI GGCC 1 cut(s) 127
Csp6I GTAC 1 cut(s) 190
CviAII CATG 3 cut(s) 167, 216, 222
CviJI RGCY 2 cut(s) 113, 127
CviKI_1 RGCY 2 cut(s) 113, 127
CviQI GTAC 1 cut(s) 190
DdeI CTNAG 1 cut(s) 154
DpnI GATC 1 cut(s) 152
DpnII GATC 1 cut(s) 150
Eco147I AGGCCT 1 cut(s) 127
FaeI CATG 3 cut(s) 170, 219, 225
FaiI YATR 9 cut(s) 9, 45, 116, 123, 131, 168, 194, 217, 223
FatI CATG 3 cut(s) 166, 215, 221
GsaI CCCAGC 1 cut(s) 62
HaeIII GGCC 1 cut(s) 127
Hin1II CATG 3 cut(s) 170, 219, 225
HinfI GANTC 1 cut(s) 33
HphI GGTGA 1 cut(s) 97
Hpy166II GTNNAC 1 cut(s) 88
Hpy188I TCNGA 1 cut(s) 142
Hpy8I GTNNAC 1 cut(s) 88
HpyAV CCTTC 1 cut(s) 10
HpyCH4III ACNGT 2 cut(s) 138, 237
HpyCH4V TGCA 1 cut(s) 206
HpyF10VI GCNNNNNNNGC 1 cut(s) 212
HpyF3I CTNAG 1 cut(s) 154
Hsp92II CATG 3 cut(s) 170, 219, 225
Kzo9I GATC 1 cut(s) 150
LpnPI CCDG 3 cut(s) 44, 115, 123
MalI GATC 1 cut(s) 152
MboI GATC 1 cut(s) 150
MflI RGATCY 1 cut(s) 150
MslI CAYNNNNRTG 1 cut(s) 220
MwoI GCNNNNNNNGC 1 cut(s) 212
NdeII GATC 1 cut(s) 150
NlaIII CATG 3 cut(s) 170, 219, 225
NspI RCATGY 1 cut(s) 225
PceI AGGCCT 1 cut(s) 127
PfeI GAWTC 1 cut(s) 33
PspFI CCCAGC 1 cut(s) 58
PsuI RGATCY 1 cut(s) 150
RsaI GTAC 1 cut(s) 191
RsaNI GTAC 1 cut(s) 190
RseI CAYNNNNRTG 1 cut(s) 220
Sau3AI GATC 1 cut(s) 150
SetI ASST 2 cut(s) 147, 191
SfcI CTRYAG 1 cut(s) 121
SmiMI CAYNNNNRTG 1 cut(s) 220
SmlI CTYRAG 1 cut(s) 146
SmoI CTYRAG 1 cut(s) 146
SseBI AGGCCT 1 cut(s) 127
StuI AGGCCT 1 cut(s) 127
TaaI ACNGT 2 cut(s) 138, 237
TfiI GAWTC 1 cut(s) 33
XceI RCATGY 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.