pycom08g00060

WAT1-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
N/A
Physical Location & Seq
Forward (+)
87061 .. 87548
488 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 300 bp
ATGGTTGCTCTTTACAATCCACTTCAACCTGCAGCTTCGGCGTTTTTGTCAAGAATTTTCCTTGGAAGCCCTATTTATTTGGGAAGTGTCTTAGGAGGAATACTAATTATTGCTGGTCTGTATGTGGTAACTTGGGCGTCTTTGAGAGAAAGACAAGCAGCTTTGGATGCTGTTATACCTCACGTTGCTCGGAGCTCGGAACCTCTCATCCAGAAAGATGCAACGCTTAACAAGATACCATTCCAGAGAGGACTCATTTTCTCAGTGCCTTCCAGTTCAATACCAAAGTCGTCAGATTAA

Protein Analysis

100

Amino Acids

10.59

Weight (kDa)

9.69

Isoelectric Point (pI)

47.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 37
AcsI RAATTY 1 cut(s) 54
AcyI GRCGYC 1 cut(s) 137
AgsI TTSAA 2 cut(s) 26, 279
AloI GAACNNNNNNTCC 2 cut(s) 192, 224
AluBI AGCT 3 cut(s) 35, 161, 195
AluI AGCT 3 cut(s) 35, 161, 195
Alw21I GWGCWC 1 cut(s) 197
ApeKI GCWGC 2 cut(s) 32, 158
ApoI RAATTY 1 cut(s) 54
BanII GRGCYC 1 cut(s) 197
Bbv12I GWGCWC 1 cut(s) 197
BbvI GCAGC 2 cut(s) 44, 170
BfmI CTRYAG 1 cut(s) 30
BfuAI ACCTGC 1 cut(s) 37
BisI GCNGC 2 cut(s) 33, 159
BlsI GCNGC 2 cut(s) 34, 160
BmiI GGNNCC 1 cut(s) 201
BmsI GCATC 2 cut(s) 157, 208
BsaHI GRCGYC 1 cut(s) 137
BsaJI CCNNGG 1 cut(s) 61
Bse1I ACTGG 1 cut(s) 273
BseDI CCNNGG 1 cut(s) 61
BseGI GGATG 2 cut(s) 172, 207
BseMII CTCAG 1 cut(s) 276
BseNI ACTGG 1 cut(s) 273
BseXI GCAGC 2 cut(s) 44, 170
BsiHKAI GWGCWC 1 cut(s) 197
Bsp1286I GDGCHC 1 cut(s) 197
BspCNI CTCAG 1 cut(s) 275
BspLI GGNNCC 1 cut(s) 201
BspMAI CTGCAG 1 cut(s) 34
BspMI ACCTGC 1 cut(s) 37
BsrI ACTGG 1 cut(s) 273
BssECI CCNNGG 1 cut(s) 61
BssNI GRCGYC 1 cut(s) 137
BssT1I CCWWGG 1 cut(s) 61
BstACI GRCGYC 1 cut(s) 137
BstDEI CTNAG 2 cut(s) 91, 262
BstF5I GGATG 2 cut(s) 172, 207
BstMWI GCNNNNNNNGC 2 cut(s) 38, 167
BstSFI CTRYAG 1 cut(s) 30
BstV1I GCAGC 2 cut(s) 44, 170
BtsCI GGATG 2 cut(s) 172, 207
BtsIMutI CAGTG 1 cut(s) 270
BveI ACCTGC 1 cut(s) 37
CseI GACGC 1 cut(s) 126
CviJI RGCY 4 cut(s) 35, 69, 161, 195
CviKI_1 RGCY 4 cut(s) 35, 69, 161, 195
DdeI CTNAG 2 cut(s) 91, 262
Ecl136II GAGCTC 1 cut(s) 195
Eco130I CCWWGG 1 cut(s) 61
Eco24I GRGCYC 1 cut(s) 197
Eco53kI GAGCTC 1 cut(s) 195
EcoICRI GAGCTC 1 cut(s) 195
EcoT14I CCWWGG 1 cut(s) 61
EcoT38I GRGCYC 1 cut(s) 197
ErhI CCWWGG 1 cut(s) 61
FaiI YATR 2 cut(s) 123, 176
Fnu4HI GCNGC 2 cut(s) 33, 159
FokI GGATG 2 cut(s) 179, 194
FriOI GRGCYC 1 cut(s) 197
Fsp4HI GCNGC 2 cut(s) 33, 159
GluI GCNGC 2 cut(s) 33, 159
HgaI GACGC 1 cut(s) 126
Hin1I GRCGYC 1 cut(s) 137
HinfI GANTC 1 cut(s) 252
Hpy188I TCNGA 3 cut(s) 192, 199, 295
Hpy188III TCNNGA 3 cut(s) 51, 211, 244
HpyAV CCTTC 1 cut(s) 279
HpyCH4IV ACGT 1 cut(s) 183
HpyCH4V TGCA 2 cut(s) 32, 221
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 167
HpyF3I CTNAG 2 cut(s) 91, 262
HpySE526I ACGT 1 cut(s) 183
Hsp92I GRCGYC 1 cut(s) 137
LmnI GCTCC 1 cut(s) 192
LpnPI CCDG 5 cut(s) 42, 99, 224, 257, 286
Lsp1109I GCAGC 2 cut(s) 44, 170
LweI GCATC 2 cut(s) 157, 208
MaeII ACGT 1 cut(s) 183
MaeIII GTNAC 1 cut(s) 127
MhlI GDGCHC 1 cut(s) 197
MluCI AATT 2 cut(s) 54, 105
MlyI GAGTC 1 cut(s) 246
MnlI CCTC 4 cut(s) 89, 189, 213, 242
MseI TTAA 2 cut(s) 228, 298
MwoI GCNNNNNNNGC 2 cut(s) 38, 167
NlaIV GGNNCC 1 cut(s) 201
PkrI GCNGC 2 cut(s) 34, 160
PleI GAGTC 1 cut(s) 246
PpsI GAGTC 1 cut(s) 246
Psp124BI GAGCTC 1 cut(s) 197
PspN4I GGNNCC 1 cut(s) 201
PstI CTGCAG 1 cut(s) 34
SacI GAGCTC 1 cut(s) 197
SaqAI TTAA 2 cut(s) 228, 298
SatI GCNGC 2 cut(s) 33, 159
SchI GAGTC 1 cut(s) 246
SduI GDGCHC 1 cut(s) 197
SetI ASST 7 cut(s) 31, 37, 163, 181, 186, 197, 205
SfaNI GCATC 2 cut(s) 157, 208
SfcI CTRYAG 1 cut(s) 30
Sse9I AATT 2 cut(s) 54, 105
SstI GAGCTC 1 cut(s) 197
StyI CCWWGG 1 cut(s) 61
TaiI ACGT 1 cut(s) 186
TasI AATT 2 cut(s) 54, 105
Tru1I TTAA 2 cut(s) 228, 298
Tru9I TTAA 2 cut(s) 228, 298
TscAI CASTG 1 cut(s) 270
TseI GCWGC 2 cut(s) 32, 158
TspRI CASTG 1 cut(s) 270
XapI RAATTY 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.