Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

1326957 .. 1329590

Gene Structure 2634 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 732 bp

ATGTCTACGAACAAATGGTGTTGCAATGAAAGGCACGATGCAGCAAGGCAAGGGGAGGTGAGGCACTTCTTTAAGTATGCATCGATCTTGGCCAAACTCACGATTCAAATCGTACACTCACATTATGAATTAAACTCTACGAAAGGACAGACGGTGTTGCTTTTTGGGGACCTCTCTTACGCAGATGATTCTCCGTTTCATGACAATAACCGGTGGGATACCGGACGCATGGGGGAGGTTCGTAGAGAGAAATGTCGCTTACCAGCCTTGCACTTAGACTCGTATGATATAATTGCAATGTTGTTTCAGGGAGAAAGTAAACCCTTCAAACCATACACAACCCGTTATTTTCTTCTGTACGAACTTCCGAAAGTGAACAAGACAGTGACACCATGGCTTATTGTTCTTATGCATTCTCATTCTCCACTGTATAACAGTTACTTTGTGGAATATAAAGTAGATGTTGTCTTCCCTGTCCATGTTCATGCCTACGACCGATATGTAAGTGAACGGTTATCAAATGTTTCTACAACATTTCGAAGACTCTGCACTCCGAGAAGTGACCAGTCAGCCCCGGTTTACATAACTATTGGAGGAAACCTAGAAGGATTGGTTACCGAAATGTCAGAACCACAGCCAAGTTACTCAGCTTTCCGGGAAGCTAGCTTCGGTCATGGGATTTTCAATATAAAGAACAGAACTCATGCTTTTTTCAGTTGGCATCGGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009505 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0030312 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042578 GO:0042594 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0071496 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

244

Amino Acids

28.32

Weight (kDa)

8.8

Isoelectric Point (pI)

49.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos_C	PF14008	191 - 243	1.6e-13	Iron/zinc purple acid phosphatase-like protein C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	5
AcoI	YGGCCR	1 cut(s)	90
AfaI	GTAC	2 cut(s)	114, 359
AgeI	ACCGGT	1 cut(s)	210
AgsI	TTSAA	3 cut(s)	107, 328, 685
AluBI	AGCT	3 cut(s)	650, 662, 666
AluI	AGCT	3 cut(s)	650, 662, 666
AoxI	GGCC	1 cut(s)	90
ApeKI	GCWGC	1 cut(s)	41
AsiGI	ACCGGT	1 cut(s)	210
AspS9I	GGNCC	1 cut(s)	169
AsuC2I	CCSGG	2 cut(s)	575, 656
AsuHPI	GGTGA	1 cut(s)	70
AsuII	TTCGAA	1 cut(s)	538
AsuNHI	GCTAGC	1 cut(s)	662
AvaII	GGWCC	1 cut(s)	169
BalI	TGGCCA	1 cut(s)	92
BbsI	GAAGAC	2 cut(s)	460, 547
BbvI	GCAGC	1 cut(s)	53
BcgI	CGANNNNNNTGC	2 cut(s)	528, 562
BciVI	GTATCC	1 cut(s)	211
BcnI	CCSGG	2 cut(s)	575, 656
BfaI	CTAG	2 cut(s)	602, 663
BfuI	GTATCC	1 cut(s)	211
BisI	GCNGC	1 cut(s)	42
BlsI	GCNGC	1 cut(s)	43
Bme1390I	CCNGG	2 cut(s)	575, 656
Bme18I	GGWCC	1 cut(s)	169
BmgT120I	GGNCC	1 cut(s)	169
BmiI	GGNNCC	1 cut(s)	170
BmrFI	CCNGG	2 cut(s)	575, 656
BmsI	GCATC	2 cut(s)	28, 89
BmtI	GCTAGC	1 cut(s)	666
BpiI	GAAGAC	2 cut(s)	460, 547
Bpu14I	TTCGAA	1 cut(s)	538
BpuMI	CCSGG	2 cut(s)	575, 656
Bsa29I	ATCGAT	1 cut(s)	83
BsaBI	GATNNNNATC	1 cut(s)	107
BsaJI	CCNNGG	2 cut(s)	392, 573
BsaWI	WCCGGW	2 cut(s)	210, 221
Bse118I	RCCGGY	1 cut(s)	210
Bse1I	ACTGG	1 cut(s)	565
Bse3DI	GCAATG	2 cut(s)	31, 303
Bse8I	GATNNNNATC	1 cut(s)	107
BseCI	ATCGAT	1 cut(s)	83
BseDI	CCNNGG	2 cut(s)	392, 573
BseJI	GATNNNNATC	1 cut(s)	107
BseMI	GCAATG	2 cut(s)	31, 303
BseMII	CTCAG	1 cut(s)	660
BseNI	ACTGG	1 cut(s)	565
BseXI	GCAGC	1 cut(s)	53
BsgI	GTGCAG	1 cut(s)	532
Bsh1285I	CGRYCG	1 cut(s)	496
BshFI	GGCC	1 cut(s)	92
BshTI	ACCGGT	1 cut(s)	210
BshVI	ATCGAT	1 cut(s)	83
BsiEI	CGRYCG	1 cut(s)	496
BsiSI	CCGG	4 cut(s)	211, 222, 575, 655
BslFI	GGGAC	1 cut(s)	182
BsmFI	GGGAC	1 cut(s)	182
BsmI	GAATGC	1 cut(s)	412
BsnI	GGCC	1 cut(s)	92
Bsp119I	TTCGAA	1 cut(s)	538
Bsp143I	GATC	1 cut(s)	84
Bsp19I	CCATGG	1 cut(s)	392
BspANI	GGCC	1 cut(s)	92
BspCNI	CTCAG	1 cut(s)	659
BspDI	ATCGAT	1 cut(s)	83
BspHI	TCATGA	1 cut(s)	199
BspLI	GGNNCC	1 cut(s)	170
BspOI	GCTAGC	1 cut(s)	666
BspT104I	TTCGAA	1 cut(s)	538
BsrDI	GCAATG	2 cut(s)	31, 303
BsrFI	RCCGGY	1 cut(s)	210
BsrI	ACTGG	1 cut(s)	565
BssAI	RCCGGY	1 cut(s)	210
BssECI	CCNNGG	2 cut(s)	392, 573
BssMI	GATC	1 cut(s)	84
BssT1I	CCWWGG	1 cut(s)	392
Bst4CI	ACNGT	5 cut(s)	154, 385, 429, 437, 513
BstBI	TTCGAA	1 cut(s)	538
BstC8I	GCNNGC	1 cut(s)	664
BstDEI	CTNAG	2 cut(s)	274, 646
BstDSI	CCRYGG	1 cut(s)	392
BstEII	GGTNACC	1 cut(s)	613
BstKTI	GATC	1 cut(s)	87
BstMBI	GATC	1 cut(s)	84
BstMCI	CGRYCG	1 cut(s)	496
BstPI	GGTNACC	1 cut(s)	613
BstSCI	CCNGG	2 cut(s)	573, 654
BstV1I	GCAGC	1 cut(s)	53
BstV2I	GAAGAC	2 cut(s)	460, 547
Bsu15I	ATCGAT	1 cut(s)	83
BsuI	GTATCC	1 cut(s)	211
BsuRI	GGCC	1 cut(s)	92
BsuTUI	ATCGAT	1 cut(s)	83
BtgI	CCRYGG	1 cut(s)	392
BtsIMutI	CAGTG	2 cut(s)	390, 425
Cac8I	GCNNGC	1 cut(s)	664
CciI	TCATGA	1 cut(s)	199
Cfr10I	RCCGGY	1 cut(s)	210
Cfr13I	GGNCC	1 cut(s)	169
ClaI	ATCGAT	1 cut(s)	83
CseI	GACGC	1 cut(s)	234
Csp6I	GTAC	2 cut(s)	113, 358
CspAI	ACCGGT	1 cut(s)	210
CviAII	CATG	7 cut(s)	200, 229, 393, 479, 485, 674, 704
CviJI	RGCY	8 cut(s)	92, 266, 397, 572, 637, 650, 662, 666
CviKI_1	RGCY	8 cut(s)	92, 266, 397, 572, 637, 650, 662, 666
CviQI	GTAC	2 cut(s)	113, 358
DdeI	CTNAG	2 cut(s)	274, 646
DpnI	GATC	1 cut(s)	86
DpnII	GATC	1 cut(s)	84
EaeI	YGGCCR	1 cut(s)	90
Eco130I	CCWWGG	1 cut(s)	392
Eco47I	GGWCC	1 cut(s)	169
Eco91I	GGTNACC	1 cut(s)	613
EcoO109I	RGGNCCY	1 cut(s)	169
EcoO65I	GGTNACC	1 cut(s)	613
EcoT14I	CCWWGG	1 cut(s)	392
EcoT22I	ATGCAT	2 cut(s)	82, 414
ErhI	CCWWGG	1 cut(s)	392
FaeI	CATG	7 cut(s)	203, 232, 396, 482, 488, 677, 707
FaqI	GGGAC	1 cut(s)	182
FatI	CATG	7 cut(s)	199, 228, 392, 478, 484, 673, 703
FblI	GTMKAC	1 cut(s)	5
Fnu4HI	GCNGC	1 cut(s)	42
Fsp4HI	GCNGC	1 cut(s)	42
FspBI	CTAG	2 cut(s)	602, 663
GluI	GCNGC	1 cut(s)	42
HaeIII	GGCC	1 cut(s)	92
HapII	CCGG	4 cut(s)	211, 222, 575, 655
HgaI	GACGC	1 cut(s)	234
Hin1II	CATG	7 cut(s)	203, 232, 396, 482, 488, 677, 707
HinfI	GANTC	4 cut(s)	103, 188, 278, 543
HpaII	CCGG	4 cut(s)	211, 222, 575, 655
HphI	GGTGA	1 cut(s)	70
Hpy166II	GTNNAC	6 cut(s)	6, 115, 320, 376, 509, 580
Hpy188I	TCNGA	4 cut(s)	369, 555, 628, 726
Hpy188III	TCNNGA	2 cut(s)	100, 200
Hpy8I	GTNNAC	6 cut(s)	6, 115, 320, 376, 509, 580
HpyAV	CCTTC	2 cut(s)	334, 599
HpyCH4III	ACNGT	5 cut(s)	154, 385, 429, 437, 513
HpyCH4V	TGCA	7 cut(s)	24, 41, 80, 271, 296, 412, 549
HpyF3I	CTNAG	2 cut(s)	274, 646
Hsp92II	CATG	7 cut(s)	203, 232, 396, 482, 488, 677, 707
Kzo9I	GATC	1 cut(s)	84
LpnPI	CCDG	8 cut(s)	224, 235, 276, 293, 486, 578, 588, 668
Lsp1109I	GCAGC	1 cut(s)	53
LweI	GCATC	2 cut(s)	28, 89
MaeI	CTAG	2 cut(s)	602, 663
MaeIII	GTNAC	5 cut(s)	385, 437, 560, 613, 641
MalI	GATC	1 cut(s)	86
MboI	GATC	1 cut(s)	84
MboII	GAAGA	3 cut(s)	344, 460, 552
MlsI	TGGCCA	1 cut(s)	92
MluCI	AATT	3 cut(s)	128, 291, 727
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	2 cut(s)	272, 537
MnlI	CCTC	5 cut(s)	49, 54, 182, 229, 587
Mox20I	TGGCCA	1 cut(s)	92
Mph1103I	ATGCAT	2 cut(s)	82, 414
MscI	TGGCCA	1 cut(s)	92
MseI	TTAA	3 cut(s)	72, 131, 730
MslI	CAYNNNNRTG	1 cut(s)	483
Msp20I	TGGCCA	1 cut(s)	92
MspI	CCGG	4 cut(s)	211, 222, 575, 655
MspR9I	CCNGG	2 cut(s)	575, 656
Mva1269I	GAATGC	1 cut(s)	412
NciI	CCSGG	2 cut(s)	575, 656
NcoI	CCATGG	1 cut(s)	392
NdeII	GATC	1 cut(s)	84
NheI	GCTAGC	1 cut(s)	662
NlaIII	CATG	7 cut(s)	203, 232, 396, 482, 488, 677, 707
NlaIV	GGNNCC	1 cut(s)	170
NmuCI	GTSAC	2 cut(s)	385, 560
NsiI	ATGCAT	2 cut(s)	82, 414
NspV	TTCGAA	1 cut(s)	538
PagI	TCATGA	1 cut(s)	199
PctI	GAATGC	1 cut(s)	412
PfeI	GAWTC	2 cut(s)	103, 188
PfoI	TCCNGGA	1 cut(s)	654
PinAI	ACCGGT	1 cut(s)	210
PkrI	GCNGC	1 cut(s)	43
PleI	GAGTC	2 cut(s)	272, 537
PpsI	GAGTC	2 cut(s)	272, 537
PpuMI	RGGWCCY	1 cut(s)	169
Psp5II	RGGWCCY	1 cut(s)	169
PspEI	GGTNACC	1 cut(s)	613
PspN4I	GGNNCC	1 cut(s)	170
PspPI	GGNCC	1 cut(s)	169
PspPPI	RGGWCCY	1 cut(s)	169
RsaI	GTAC	2 cut(s)	114, 359
RsaNI	GTAC	2 cut(s)	113, 358
RseI	CAYNNNNRTG	1 cut(s)	483
SaqAI	TTAA	3 cut(s)	72, 131, 730
SatI	GCNGC	1 cut(s)	42
Sau3AI	GATC	1 cut(s)	84
Sau96I	GGNCC	1 cut(s)	169
SchI	GAGTC	2 cut(s)	272, 537
ScrFI	CCNGG	2 cut(s)	575, 656
SetI	ASST	7 cut(s)	60, 174, 240, 603, 652, 664, 668
SfaNI	GCATC	2 cut(s)	28, 89
SfuI	TTCGAA	1 cut(s)	538
SinI	GGWCC	1 cut(s)	169
SmiMI	CAYNNNNRTG	1 cut(s)	483
Sse9I	AATT	3 cut(s)	128, 291, 727
SspMI	CTAG	2 cut(s)	602, 663
StyD4I	CCNGG	2 cut(s)	573, 654
StyI	CCWWGG	1 cut(s)	392
TaaI	ACNGT	5 cut(s)	154, 385, 429, 437, 513
TaqI	TCGA	2 cut(s)	83, 538
TaqII	GACCGA	2 cut(s)	510, 659
TasI	AATT	3 cut(s)	128, 291, 727
TfiI	GAWTC	2 cut(s)	103, 188
Tru1I	TTAA	3 cut(s)	72, 131, 730
Tru9I	TTAA	3 cut(s)	72, 131, 730
TscAI	CASTG	2 cut(s)	390, 432
TseFI	GTSAC	2 cut(s)	385, 560
TseI	GCWGC	1 cut(s)	41
Tsp45I	GTSAC	2 cut(s)	385, 560
TspDTI	ATGAA	4 cut(s)	42, 141, 188, 473
TspGWI	ACGGA	1 cut(s)	183
TspRI	CASTG	2 cut(s)	390, 432
VpaK11BI	GGWCC	1 cut(s)	169
XmiI	GTMKAC	1 cut(s)	5
XspI	CTAG	2 cut(s)	602, 663
Zsp2I	ATGCAT	2 cut(s)	82, 414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.