pycom08g03740

C2 domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
N/A
Physical Location & Seq
Reverse (-)
2880368 .. 2880613
246 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
ATGCTGTGGTTGCTTTCCCACTACAATTACTGCCACCCAGTTGCCTACTTTTTATCTCTCATTTATCTTTACCTGGTAAGAATGTTACCATTCACTTATGCCCTTACATTTTGTTTTCATTCATCTTTCATATATATACATTTGAAACTCGTAGCATTAGGGTCTTTCGCCTTCGATACGTTTTATCAGTGTTATTTAATGATTATTTCTGTTAAGGGAAACATGGTATGTAATATAATTTGGTAA

Protein Analysis

82

Amino Acids

9.7

Weight (kDa)

8.39

Isoelectric Point (pI)

44.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 145
AjnI CCWGG 1 cut(s) 72
BciT130I CCWGG 1 cut(s) 74
Bme1390I CCNGG 1 cut(s) 74
BmrFI CCNGG 1 cut(s) 74
BmrI ACTGGG 1 cut(s) 32
BmuI ACTGGG 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 38
BseBI CCWGG 1 cut(s) 74
BseNI ACTGG 1 cut(s) 38
BsrI ACTGG 1 cut(s) 38
Bst2UI CCWGG 1 cut(s) 74
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 74
BstSCI CCNGG 1 cut(s) 72
BtsIMutI CAGTG 1 cut(s) 194
CsiI ACCWGGT 1 cut(s) 72
CviAII CATG 1 cut(s) 223
EcoRII CCWGG 1 cut(s) 72
FaeI CATG 1 cut(s) 226
FaiI YATR 8 cut(s) 99, 131, 133, 135, 137, 224, 229, 236
FatI CATG 1 cut(s) 222
Hin1II CATG 1 cut(s) 226
HpyAV CCTTC 1 cut(s) 181
HpyCH4IV ACGT 1 cut(s) 179
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpySE526I ACGT 1 cut(s) 179
Hsp92II CATG 1 cut(s) 226
LpnPI CCDG 3 cut(s) 51, 59, 86
MabI ACCWGGT 1 cut(s) 72
MaeII ACGT 1 cut(s) 179
MaeIII GTNAC 1 cut(s) 84
MluCI AATT 2 cut(s) 25, 237
MseI TTAA 2 cut(s) 197, 213
MspR9I CCNGG 1 cut(s) 74
MvaI CCWGG 1 cut(s) 74
MwoI GCNNNNNNNGC 1 cut(s) 10
NlaIII CATG 1 cut(s) 226
Psp6I CCWGG 1 cut(s) 72
PspGI CCWGG 1 cut(s) 72
SaqAI TTAA 2 cut(s) 197, 213
ScrFI CCNGG 1 cut(s) 74
SetI ASST 2 cut(s) 75, 182
SexAI ACCWGGT 1 cut(s) 72
SgeI CNNG 5 cut(s) 50, 85, 86, 161, 235
Sse9I AATT 2 cut(s) 25, 237
StyD4I CCNGG 1 cut(s) 72
TaiI ACGT 1 cut(s) 182
TaqI TCGA 1 cut(s) 174
TasI AATT 2 cut(s) 25, 237
Tru1I TTAA 2 cut(s) 197, 213
Tru9I TTAA 2 cut(s) 197, 213
TscAI CASTG 1 cut(s) 194
TspDTI ATGAA 3 cut(s) 107, 111, 118
TspRI CASTG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.