pycom08g04640
ERF Family

Transmembrane 9 superfamily member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
N/A
Physical Location & Seq
Reverse (-)
3511725 .. 3513842
2118 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1284 bp
ATGTTTGATGTCACAACTGTCCAACCGAGGATCCTCGATAATGTACCTCTAGTCGTTCCCTTTGAAAGGCTATATCAAAAAGCTCGTACTGTTTATCAGCTTGGATTTCATGTTGGGTTCAAAGGCCATTATGCTGGGAGCAAAGAAGAGGAATACTTCATCCACAACCATCTGGCATTTACTGTGAAGTACCATAAAGATCCGCGAACTGGAACAGCAAGAATTGTGGGATTTGAGGTTAAACCATTCAGTACCTGTAACCCCCATTCGAAACACACTGTTGTTAATTCTAACTCTCCTCAAGAGGTTGCCGAGAAGCAAGAAATCGTATTTACCTATGATGTTGAATTCCAGTATAATGAACTTCAGACCCAGGAAGAAGTGCAAGACGAAACAGGATGGAAACTTATCCACGGGGATGTCTTCAGGCCTCCAAATAACTCTGAATTGCTCTGTGTATATGTTGGAACTGGCGTTCAATTGTTTGGAATGAAACTGGTGACAATGATATTTGCTGTTCTTGGCTTCCTCTCCCCATCTAACCGGGGCCGTCTCATGACCACAATGCTCTTGCTCTGTGTCTTCATGCGACTCTTCGCCGGTTACACCTCAGTTCGCTTGTACAAGACGTTTCAGGGTACAGAATGGATGAAAATCGCATTCAGGACTGCAGTCATGTTCCCAGCAACTGTCTCTTCCATTTTCATTGTCTTGAACACTCTGATTTGGGACCAGAACGCATCTGGAGCTGTGCCATTTGGCACAATGTTGACCCTGGTCTTTTTTTGGTTCGGAATCTCAGTCCCACTCGTATTTGTGGGAGGCTATGTTGGGTTCAGGAAGCCAGCACTTGAGGATCTAGTAAAGACAAACAAAGTCCCAAGACAGATCCCAGAACCGGCCTGGTACATGAACCCAGTTTTCTCAATTCTAATCGGAGGGATCCTCCCATTCGGAGCAGTTTTCGTCGAACTATACTTCATCCTCACTTCGATTTGGCTGAACGAGTTCTACTACATGTTTAGTTTCCTCTTCTTGGTCTTCATCATCCTCATCATCACATGCCGAGGATTACTTGTGGTCGTGGATCGATCATACCTCACATCCGGCTCATCGGCTCTGTACCTCTTCCTCTACGCCACATTCTACTTCTTCACAAAGCTGGTCTCGGTCCTCTTATACTTCGGGTACATGCTCATTGCTTCTTATGCTTTCTTTGTTGTCACCGGAACAATCGGCTTCAACGCCTGCTTTTGGTTCACGAGGCTCATCTACTCATCGTAA

Protein Analysis

428

Amino Acids

48.91

Weight (kDa)

8.62

Isoelectric Point (pI)

36.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EMP70 PF02990 11 - 121 6.8e-18 Endomembrane protein 70
EMP70 PF02990 119 - 388 1.9e-100 Endomembrane protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 205
AciI CCGC 1 cut(s) 203
AclWI GGATC 8 cut(s) 25, 38, 194, 864, 883, 937, 950, 1095
AcsI RAATTY 1 cut(s) 347
AcuI CTGAAG 2 cut(s) 350, 409
AfaI GTAC 9 cut(s) 45, 88, 191, 253, 623, 640, 908, 1124, 1190
AfiI CCNNNNNNNGG 5 cut(s) 66, 209, 898, 1036, 1254
AflIII ACRYGT 1 cut(s) 1017
AgsI TTSAA 6 cut(s) 65, 121, 347, 479, 715, 1243
AjnI CCWGG 3 cut(s) 372, 774, 902
AloI GAACNNNNNNTCC 2 cut(s) 459, 491
AluBI AGCT 4 cut(s) 83, 100, 749, 1162
AluI AGCT 4 cut(s) 83, 100, 749, 1162
Alw26I GTCTC 3 cut(s) 557, 697, 1171
AlwI GGATC 8 cut(s) 25, 38, 194, 864, 883, 937, 950, 1095
AlwNI CAGNNNCTG 2 cut(s) 255, 689
AoxI GGCC 4 cut(s) 124, 428, 547, 900
ApoI RAATTY 1 cut(s) 347
Asp700I GAANNNNTTC 1 cut(s) 1007
AspS9I GGNCC 3 cut(s) 547, 730, 1171
AsuC2I CCSGG 1 cut(s) 545
AsuHPI GGTGA 2 cut(s) 511, 1216
AsuII TTCGAA 1 cut(s) 269
AvaII GGWCC 2 cut(s) 730, 1171
BamHI GGATCC 2 cut(s) 30, 942
BauI CACGAG 1 cut(s) 1261
BbsI GAAGAC 3 cut(s) 415, 574, 1033
BccI CCATC 3 cut(s) 177, 393, 544
BceAI ACGGC 1 cut(s) 534
BciT130I CCWGG 3 cut(s) 374, 776, 904
BcnI CCSGG 1 cut(s) 545
BcoDI GTCTC 3 cut(s) 557, 697, 1171
BfaI CTAG 2 cut(s) 50, 860
BfmI CTRYAG 1 cut(s) 669
Bme1390I CCNGG 4 cut(s) 374, 545, 776, 904
Bme18I GGWCC 2 cut(s) 730, 1171
BmgT120I GGNCC 3 cut(s) 547, 730, 1171
BmiI GGNNCC 4 cut(s) 32, 548, 731, 944
BmrFI CCNGG 4 cut(s) 374, 545, 776, 904
BmrI ACTGGG 1 cut(s) 911
BmsI GCATC 1 cut(s) 749
BmuI ACTGGG 1 cut(s) 911
BoxI GACNNNNGTC 2 cut(s) 671, 776
BpiI GAAGAC 3 cut(s) 415, 574, 1033
BplI GAGNNNNNCTC 2 cut(s) 930, 962
BpmI CTGGAG 1 cut(s) 765
Bpu14I TTCGAA 1 cut(s) 269
BpuEI CTTGAG 2 cut(s) 285, 872
BpuMI CCSGG 1 cut(s) 545
Bsa29I ATCGAT 1 cut(s) 1090
BsaBI GATNNNNATC 1 cut(s) 653
BsaI GGTCTC 1 cut(s) 1171
BsaJI CCNNGG 6 cut(s) 26, 372, 412, 544, 774, 1066
BsaWI WCCGGW 1 cut(s) 1226
BsaXI ACNNNNNCTCC 2 cut(s) 813, 843
Bsc4I CCNNNNNNNGG 5 cut(s) 66, 209, 898, 1036, 1254
Bse118I RCCGGY 2 cut(s) 599, 898
Bse1I ACTGG 5 cut(s) 214, 352, 475, 501, 917
Bse3DI GCAATG 1 cut(s) 1197
Bse8I GATNNNNATC 1 cut(s) 653
BseBI CCWGG 3 cut(s) 374, 776, 904
BseCI ATCGAT 1 cut(s) 1090
BseDI CCNNGG 6 cut(s) 26, 372, 412, 544, 774, 1066
BseGI GGATG 7 cut(s) 159, 404, 424, 654, 981, 1047, 1103
BseJI GATNNNNATC 1 cut(s) 653
BseLI CCNNNNNNNGG 5 cut(s) 66, 209, 898, 1036, 1254
BseMI GCAATG 1 cut(s) 1197
BseMII CTCAG 2 cut(s) 624, 813
BseNI ACTGG 5 cut(s) 214, 352, 475, 501, 917
BseRI GAGGAG 1 cut(s) 288
BseYI CCCAGC 2 cut(s) 134, 682
Bsh1236I CGCG 1 cut(s) 205
BshFI GGCC 4 cut(s) 126, 430, 549, 902
BshVI ATCGAT 1 cut(s) 1090
BsiSI CCGG 5 cut(s) 544, 600, 899, 1107, 1227
BslFI GGGAC 3 cut(s) 743, 788, 863
BslI CCNNNNNNNGG 5 cut(s) 66, 209, 898, 1036, 1254
BsmAI GTCTC 3 cut(s) 557, 697, 1171
BsmBI CGTCTC 1 cut(s) 557
BsmFI GGGAC 3 cut(s) 743, 788, 863
BsmI GAATGC 1 cut(s) 659
BsnI GGCC 4 cut(s) 126, 430, 549, 902
Bso31I GGTCTC 1 cut(s) 1171
Bsp119I TTCGAA 1 cut(s) 269
Bsp1407I TGTACA 1 cut(s) 621
Bsp143I GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
BspACI CCGC 1 cut(s) 203
BspANI GGCC 4 cut(s) 126, 430, 549, 902
BspCNI CTCAG 2 cut(s) 623, 812
BspDI ATCGAT 1 cut(s) 1090
BspFNI CGCG 1 cut(s) 205
BspHI TCATGA 1 cut(s) 555
BspLI GGNNCC 4 cut(s) 32, 548, 731, 944
BspMAI CTGCAG 1 cut(s) 673
BspPI GGATC 8 cut(s) 25, 38, 194, 864, 883, 937, 950, 1095
BspT104I TTCGAA 1 cut(s) 269
BspTNI GGTCTC 1 cut(s) 1171
BsrDI GCAATG 1 cut(s) 1197
BsrFI RCCGGY 2 cut(s) 599, 898
BsrGI TGTACA 1 cut(s) 621
BsrI ACTGG 5 cut(s) 214, 352, 475, 501, 917
BssAI RCCGGY 2 cut(s) 599, 898
BssECI CCNNGG 6 cut(s) 26, 372, 412, 544, 774, 1066
BssMI GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
BssSI CACGAG 1 cut(s) 1261
Bst2BI CACGAG 1 cut(s) 1261
Bst2UI CCWGG 3 cut(s) 374, 776, 904
Bst4CI ACNGT 5 cut(s) 19, 91, 184, 280, 691
Bst6I CTCTTC 5 cut(s) 141, 599, 700, 1037, 1133
BstAUI TGTACA 1 cut(s) 621
BstBI TTCGAA 1 cut(s) 269
BstC8I GCNNGC 2 cut(s) 846, 1249
BstDEI CTNAG 2 cut(s) 610, 799
BstDSI CCRYGG 1 cut(s) 412
BstENI CCTNNNNNAGG 1 cut(s) 64
BstF5I GGATG 7 cut(s) 159, 404, 424, 654, 981, 1047, 1103
BstFNI CGCG 1 cut(s) 205
BstKTI GATC 7 cut(s) 33, 202, 859, 891, 945, 1090, 1094
BstMAI GTCTC 3 cut(s) 557, 697, 1171
BstMBI GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
BstMWI GCNNNNNNNGC 2 cut(s) 746, 1208
BstNI CCWGG 3 cut(s) 374, 776, 904
BstNSI RCATGY 3 cut(s) 1021, 1065, 1195
BstPAI GACNNNNGTC 2 cut(s) 671, 776
BstSCI CCNGG 4 cut(s) 372, 543, 774, 902
BstSFI CTRYAG 1 cut(s) 669
BstUI CGCG 1 cut(s) 205
BstV2I GAAGAC 3 cut(s) 415, 574, 1033
BstX2I RGATCY 5 cut(s) 30, 199, 856, 888, 942
BstXI CCANNNNNNTGG 1 cut(s) 134
BstYI RGATCY 5 cut(s) 30, 199, 856, 888, 942
Bsu15I ATCGAT 1 cut(s) 1090
BsuRI GGCC 4 cut(s) 126, 430, 549, 902
BsuTUI ATCGAT 1 cut(s) 1090
BtgI CCRYGG 1 cut(s) 412
BtsCI GGATG 7 cut(s) 159, 404, 424, 654, 981, 1047, 1103
BtsIMutI CAGTG 1 cut(s) 276
Cac8I GCNNGC 2 cut(s) 846, 1249
CaiI CAGNNNCTG 2 cut(s) 255, 689
CciI TCATGA 1 cut(s) 555
Cfr10I RCCGGY 2 cut(s) 599, 898
Cfr13I GGNCC 3 cut(s) 547, 730, 1171
ClaI ATCGAT 1 cut(s) 1090
Csp6I GTAC 9 cut(s) 44, 87, 190, 252, 622, 639, 907, 1123, 1189
CspCI CAANNNNNGTGG 2 cut(s) 207, 242
CviAII CATG 8 cut(s) 110, 556, 586, 676, 910, 1018, 1062, 1192
CviQI GTAC 9 cut(s) 44, 87, 190, 252, 622, 639, 907, 1123, 1189
DdeI CTNAG 2 cut(s) 610, 799
DpnI GATC 7 cut(s) 32, 201, 858, 890, 944, 1089, 1093
DpnII GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
Eam1104I CTCTTC 5 cut(s) 141, 599, 700, 1037, 1133
EarI CTCTTC 5 cut(s) 141, 599, 700, 1037, 1133
Eco147I AGGCCT 1 cut(s) 430
Eco31I GGTCTC 1 cut(s) 1171
Eco47I GGWCC 2 cut(s) 730, 1171
Eco57I CTGAAG 2 cut(s) 350, 409
EcoNI CCTNNNNNAGG 1 cut(s) 64
EcoRI GAATTC 1 cut(s) 347
EcoRII CCWGG 3 cut(s) 372, 774, 902
Esp3I CGTCTC 1 cut(s) 557
FaeI CATG 8 cut(s) 113, 559, 589, 679, 913, 1021, 1065, 1195
FaqI GGGAC 3 cut(s) 743, 788, 863
FatI CATG 8 cut(s) 109, 555, 585, 675, 909, 1017, 1061, 1191
FokI GGATG 7 cut(s) 146, 411, 431, 661, 968, 1034, 1090
FspBI CTAG 2 cut(s) 50, 860
GsaI CCCAGC 2 cut(s) 138, 686
GsuI CTGGAG 1 cut(s) 765
HaeIII GGCC 4 cut(s) 126, 430, 549, 902
HapII CCGG 5 cut(s) 544, 600, 899, 1107, 1227
Hin1II CATG 8 cut(s) 113, 559, 589, 679, 913, 1021, 1065, 1195
HincII GTYRAC 1 cut(s) 771
HindII GTYRAC 1 cut(s) 771
HinfI GANTC 2 cut(s) 591, 795
HpaII CCGG 5 cut(s) 544, 600, 899, 1107, 1227
HphI GGTGA 2 cut(s) 511, 1216
Hpy166II GTNNAC 2 cut(s) 771, 1260
Hpy188I TCNGA 6 cut(s) 369, 445, 723, 794, 938, 956
Hpy188III TCNNGA 7 cut(s) 302, 556, 664, 712, 744, 838, 1261
Hpy8I GTNNAC 2 cut(s) 771, 1260
Hpy99I CGWCG 1 cut(s) 971
HpyCH4III ACNGT 5 cut(s) 19, 91, 184, 280, 691
HpyCH4IV ACGT 1 cut(s) 629
HpyCH4V TGCA 2 cut(s) 385, 671
HpyF10VI GCNNNNNNNGC 2 cut(s) 746, 1208
HpyF3I CTNAG 2 cut(s) 610, 799
HpySE526I ACGT 1 cut(s) 629
Hsp92II CATG 8 cut(s) 113, 559, 589, 679, 913, 1021, 1065, 1195
Kzo9I GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
LmnI GCTCC 3 cut(s) 138, 746, 956
LweI GCATC 1 cut(s) 749
MaeI CTAG 2 cut(s) 50, 860
MaeII ACGT 1 cut(s) 629
MaeIII GTNAC 5 cut(s) 10, 257, 499, 602, 1222
MalI GATC 7 cut(s) 32, 201, 858, 890, 944, 1089, 1093
MboI GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
MfeI CAATTG 1 cut(s) 479
MflI RGATCY 5 cut(s) 30, 199, 856, 888, 942
MluCI AATT 6 cut(s) 222, 286, 347, 446, 479, 927
MlyI GAGTC 1 cut(s) 585
MmeI TCCRAC 2 cut(s) 46, 445
MroXI GAANNNNTTC 1 cut(s) 1007
MseI TTAA 2 cut(s) 240, 285
MslI CAYNNNNRTG 1 cut(s) 417
MspI CCGG 5 cut(s) 544, 600, 899, 1107, 1227
MspR9I CCNGG 4 cut(s) 374, 545, 776, 904
MunI CAATTG 1 cut(s) 479
Mva1269I GAATGC 1 cut(s) 659
MvaI CCWGG 3 cut(s) 374, 776, 904
MvnI CGCG 1 cut(s) 205
MwoI GCNNNNNNNGC 2 cut(s) 746, 1208
NciI CCSGG 1 cut(s) 545
NdeII GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
NlaIII CATG 8 cut(s) 113, 559, 589, 679, 913, 1021, 1065, 1195
NlaIV GGNNCC 4 cut(s) 32, 548, 731, 944
NmeAIII GCCGAG 2 cut(s) 337, 1091
NmuCI GTSAC 3 cut(s) 10, 499, 1222
NspI RCATGY 3 cut(s) 1021, 1065, 1195
NspV TTCGAA 1 cut(s) 269
PagI TCATGA 1 cut(s) 555
PceI AGGCCT 1 cut(s) 430
PciI ACATGT 1 cut(s) 1017
PctI GAATGC 1 cut(s) 659
PdmI GAANNNNTTC 1 cut(s) 1007
PfeI GAWTC 1 cut(s) 795
PleI GAGTC 1 cut(s) 585
PpsI GAGTC 1 cut(s) 585
PscI ACATGT 1 cut(s) 1017
PshAI GACNNNNGTC 2 cut(s) 671, 776
Psp6I CCWGG 3 cut(s) 372, 774, 902
PspFI CCCAGC 2 cut(s) 134, 682
PspGI CCWGG 3 cut(s) 372, 774, 902
PspN4I GGNNCC 4 cut(s) 32, 548, 731, 944
PspPI GGNCC 3 cut(s) 547, 730, 1171
PsrI GAACNNNNNNTAC 2 cut(s) 995, 1027
PstI CTGCAG 1 cut(s) 673
PstNI CAGNNNCTG 2 cut(s) 255, 689
PsuI RGATCY 5 cut(s) 30, 199, 856, 888, 942
RsaI GTAC 9 cut(s) 45, 88, 191, 253, 623, 640, 908, 1124, 1190
RsaNI GTAC 9 cut(s) 44, 87, 190, 252, 622, 639, 907, 1123, 1189
RseI CAYNNNNRTG 1 cut(s) 417
SaqAI TTAA 2 cut(s) 240, 285
Sau3AI GATC 7 cut(s) 30, 199, 856, 888, 942, 1087, 1091
Sau96I GGNCC 3 cut(s) 547, 730, 1171
SchI GAGTC 1 cut(s) 585
ScrFI CCNGG 4 cut(s) 374, 545, 776, 904
SfaNI GCATC 1 cut(s) 749
SfcI CTRYAG 1 cut(s) 669
SfuI TTCGAA 1 cut(s) 269
SinI GGWCC 2 cut(s) 730, 1171
SmiMI CAYNNNNRTG 1 cut(s) 417
SmlI CTYRAG 2 cut(s) 300, 851
SmoI CTYRAG 2 cut(s) 300, 851
Sse9I AATT 6 cut(s) 222, 286, 347, 446, 479, 927
SseBI AGGCCT 1 cut(s) 430
SsiI CCGC 1 cut(s) 203
SspMI CTAG 2 cut(s) 50, 860
StuI AGGCCT 1 cut(s) 430
StyD4I CCNGG 4 cut(s) 372, 543, 774, 902
TaaI ACNGT 5 cut(s) 19, 91, 184, 280, 691
TaiI ACGT 1 cut(s) 632
TaqI TCGA 5 cut(s) 36, 269, 969, 992, 1090
TaqII GACCGA 1 cut(s) 1159
TasI AATT 6 cut(s) 222, 286, 347, 446, 479, 927
TatI WGTACW 1 cut(s) 621
TfiI GAWTC 1 cut(s) 795
Tru1I TTAA 2 cut(s) 240, 285
Tru9I TTAA 2 cut(s) 240, 285
TscAI CASTG 1 cut(s) 283
TseFI GTSAC 3 cut(s) 10, 499, 1222
Tsp45I GTSAC 3 cut(s) 10, 499, 1222
TspRI CASTG 1 cut(s) 283
VpaK11BI GGWCC 2 cut(s) 730, 1171
XagI CCTNNNNNAGG 1 cut(s) 64
XapI RAATTY 1 cut(s) 347
XceI RCATGY 3 cut(s) 1021, 1065, 1195
XcmI CCANNNNNNNNNTGG 2 cut(s) 740, 900
XmnI GAANNNNTTC 1 cut(s) 1007
XspI CTAG 2 cut(s) 50, 860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.